胃病患者胃黏膜真菌感染的检测

通过检测胃炎和胃溃疡、胃癌患者胃黏膜寄居的真菌,了解胃黏膜真菌的菌种多样性及其与胃溃疡的关系。采集消化科就诊患者胃镜钳取的胃黏膜标本63例,采用念珠菌显色培养基(CHROMagar)进行真菌分离培养鉴定。用玉米吐温80培养基进行真菌孢子形态学检查,用ITS(internal transcribed spacer region)序列限制性片段长度多态性(Restriction fragment length polymorphism,RFLP)检测分析真菌菌种多样性。分离培养真菌32(32/63,50.8%)株,经ITS序列RFLP法鉴定为白假丝酵母菌31株,光滑假丝酵母菌1株。真菌阳性率与病理诊断成正相关(r=0.263,P=0.027),与性别、年龄、吸烟、饮酒、学历的相关性均无统计学意义(P0.05)。结果表明,胃黏膜寄居的真菌存在多样性,且真菌阳性率与病理损害程度存在相关性。     

福建地区94例女性阴道念珠菌感染分离株分型研究

目的 对福建地区临床阴道分泌物分离出的（94株）念珠菌菌株进行分类鉴定,并通过分子生物学及API试验分析传统科玛嘉分类方法的准确性.方法 ①通过科玛嘉显色培养基鉴定菌种,并观察菌株显微镜下形态学表现.②通过ITS区段分子生物学序列分析进行菌种鉴定.③将科玛嘉试验与ITS区段序列分析结果与化验室检验报告结果对比,将鉴定差别菌株进一步行API试验及LSU区段序列分析.结果 ①94株念珠菌经鉴定结果为白念珠菌78株、光滑念珠菌10株、近平滑念珠菌3株、热带念珠菌1株、酿酒假丝酵母菌1株及其中1株为光滑念珠菌及近平滑念珠菌混合感染.②科玛嘉试验可良好的鉴定念珠菌,但对于少见菌种（如酿酒假丝酵母菌）仍缺乏特异性.③一般化验室通过简单菌落形态学及简易科玛嘉检测鉴定仍存在一定误差率（10/94）.④分子生物学方法鉴定菌种准确性高,且可从基因序列分析中鉴定包含C.parapsilosis sensu strico,Candida metapsilosis以及Candida orthopsilosis的近平滑念珠菌复合体菌种.结论 福建地区女性外阴感染的菌种仍以白念珠菌为主,但非白念珠菌的感染也占据相当的比例（16/94）,而在检测方法上,分子生物学技术较科玛嘉试验更能准确的鉴定念珠菌菌种.     

深圳市人民医院连续13年真菌血症病原谱分析

目的调查深圳市人民医院真菌血症病原谱。方法收集2004-2016年深圳市人民医院真菌血症患者血液分离的真菌,使用VITEK-2、VITEK-MS系统并结合真菌内转录间隔区(ITS)测序技术进行菌种鉴定。结果 2004-2016年共发生真菌血症295例,分离296株真菌,假丝酵母菌占89.9%(266/296)。最常见前5位真菌依次为白假丝酵母菌(36.1%,107/296)、近平滑假丝酵母菌种复合群(19.3%,57/296)、热带假丝酵母菌(13.9%,41/296)、光滑假丝酵母菌种复合群(11.8%,35/296)和菌膜假丝酵母菌(4.7%,14/296);非白假丝酵母菌占53.7%(159/296)。69.8%(206/295)真菌血症来自重症医学科(ICU)(89例)、新生儿科(33例)、血液科(30例)、胃肠外科(29例)和呼吸科(25例)。结论假丝酵母菌是真菌血症最重要的病原菌,其中非白假丝酵母菌占比过半。     

医院内假丝酵母菌感染菌种的分布及耐药分析

目的了解医院内假丝酵母菌感染菌种的分布及抗真菌药物的耐药谱,为临床抗真菌治疗提供正确数据。方法采用VITEK-32微生物自动鉴定仪进行假丝酵母菌菌种的鉴定,同时用ATB FUNGUS真菌药敏条作药敏试验。结果从住院患者的血液、痰、尿、分泌物、胆汁等标本中共检出真菌505株。其中白假丝酵母菌281株,热带假丝酵母菌124株,光滑假丝酵母菌21株,季也蒙假丝酵母菌17株,近平滑假丝酵母菌16株,克柔假丝酵母菌10株,皱折假丝酵母菌8株,异常汉逊假丝酵母菌6株,5氟-胞嘧啶和两性霉素抑菌效果最好,其耐药率分别为2.8%和3.4%。其他4种抗真菌药物制霉菌素、氟康唑、伊曲康唑和酮康唑的耐药率分别为6.1%、13.7%、9.3%和28.3%。结论医院假丝酵母菌感染耐药率逐年上升,非白假丝酵母菌感染明显增加。氟康唑对白假丝酵母菌有很强的抗菌活性且毒副作用小。假丝酵母菌感染的迅速增加同广泛应用超广谱抗菌药物、激素及免疫抑制剂等有关。假丝酵母菌感染死亡率高,因此早期诊断及有效性治疗是减少死亡率的关键。     

BD Phoenix^TM酵母菌鉴定板对临床分离酵母菌鉴定能力的评估

目的 评估BD Phoenix^TM酵母菌鉴定板对酵母菌的鉴定能力.方法 选取白念珠菌18株,热带念珠菌22株,光滑念珠菌19株,克柔念珠菌8株,近平滑念珠菌20株,新生隐球菌14株,季也蒙念珠菌4株,平常念珠菌1株,葡萄牙念珠菌1株,头状地霉2株,挪威念珠菌1株,链状念珠菌1株,乳酒念珠菌1株,希木龙念珠菌1株,解脂念珠菌3株,皱褶念珠菌1株,菌膜念珠菌3株,共计120株.借助Phoenix^TM 100全自动微生物鉴定仪,使用BD Phoenix^TM酵母菌鉴定板鉴定上述菌株.用真菌通用引物ITS1与ITS4对所有受试菌株的rDNA进行PCR扩增,对PCR产物进行序列测定、分析并作为金标准与BD Phoenix^TM酵母菌鉴定板的结果比较,同时使用MALDI-TOF MS质谱分析对试验菌株进行菌种鉴定.结果 BDPhoenix^TM酵母菌鉴定板除了对1株挪威念珠菌、1株平常念珠菌、1株解脂念珠菌、1株皱褶念珠菌未能鉴定以及1株链状念珠菌、1株克柔念珠菌、2株菌膜念珠菌、1株解脂念珠菌鉴定错误外其余试验菌株鉴定均正确,鉴定准确率为92.5％.所有鉴定结果均在17 h内获得,而白念珠菌、热带念珠菌、近平滑念珠菌的鉴定时间均小于6h,并且不受推荐培养基的限制.所有菌株MALDI-TOF MS的鉴定结果与其rDNA ITS序列分析的结果完全一致.结论 BD Phoenix^TM酵母菌鉴定板对多数酵母菌能够快速准确地鉴定到种,但对某些少见酵母菌的鉴定能力有待进一步考证.     

深部真菌感染临床特点分析

目的了解深部真菌感染患者的性别、年龄、感染部位、住院科室、菌种分布及真菌耐药情况,为临床防治真菌感染提供研究依据。方法收集荆州市中心医院2009年1月至2009年12月微生物实验室分离的真菌446株,采用科马嘉显色琼脂及API220C Aux鉴定系统鉴定,并使用ATMTMFUNGUS3真菌药敏卡进行体外药敏试验。结果临床真菌感染男性占72%,以老年患者为主,大于60岁者占54.9%;感染的真菌主要分布于呼吸内科和ICU,分别占35.5%、24.9%;主要感染部位为呼吸道,占91.3%;主要菌种为白假丝酵母菌、热带念株菌、近平滑假丝酵母菌、光滑念株菌和克柔念株菌,分别占64.2%、13.2%、9.6%、7.6%和5.4%;合并细菌感染的感染真菌100株,占22.2%,细菌中以革兰阴杆性菌为主,占96%;药敏试验结果显示真菌对各抗真菌药具有较好的敏感性。结论临床真菌感染已日益突出,以呼吸科及ICU患者老年男性为主,儿童真菌感染亦不容忽视,感染菌种以白假丝酵母菌和热带念株菌为主,临床应加强对这些真菌感染的预防和监测,防止真菌感染。     

男性生殖道真菌感染菌种构成及耐药分析

目的探讨男性生殖道真菌感染病原菌的种类构成及耐药性,为临床治疗提供依据。方法采集2367份男性患者生殖道分泌物立即送检采用法国生物梅里埃公司Vitek2-Compact进行菌种鉴定以及ATB FUNGUS3真菌药敏试剂条进行药敏试验。结果 2 367例男性生殖道炎症患者中,共检出真菌410例,检出率为17.32%,其中白色假丝酵母菌303株,占73.90%;近平滑假丝酵母菌75株,占18.29%;热带假丝酵母菌16株,占3.90%;4种假丝酵母菌对两性霉素B的敏感率为100.00%;白色假丝酵母菌和热带假丝酵母菌对伏立康唑、氟康唑、依曲康唑耐药率分别为1.65%、1.32%、7.59%和12.50%、12.50%、18.75%。结论假丝酵母菌在男性生殖道感染中占有一定比例;菌种以白色假丝酵母菌为主,近平滑假丝酵母菌次之。因为它们对唑类抗真菌药物有不同程度的耐药,所以临床应加强假丝酵母菌的检测和药敏分析,合理选用药物。     

北京医院侵袭性酵母菌的感染分布及耐药性分析

目的调查北京医院2012～2013年及2016～2017年侵袭性酵母菌的感染分布情况及耐药情况。方法对临床检出侵袭性酵母菌进行菌株收集和统计,采用科马嘉显色培养基、API20C AUX和VITEK-2 Compact YST卡进行菌种鉴定及药物敏感试验,同时用质谱对所有菌株进行复核鉴定。其中真菌药敏试验采用ATB FUNGUS 3酵母样真菌药敏试剂盒(微量稀释)。结果 2012～2013年我院共检出侵袭性酵母菌62株,其中白念珠菌36株,占比58.06%;光滑念珠菌17株,占比27.41%;近平滑念珠菌5株,占比8.06%;热带念珠菌3株,占比4.83%;其他念珠菌1株,占比1.60%。2016～2017年我院共检出侵袭性酵母菌43株,其中白念珠菌21株,占比48.83%;光滑念珠菌11株,占比25.58%;近平滑念珠菌6株,占比13.95%;热带念珠菌5株,占比11.63%。真菌药物敏感结果显示白念珠菌、光滑念珠菌及热带念珠菌对5-氟胞嘧啶存在不同程度的耐药性。2016～2017年侵袭性酵母菌未发现菌株耐药。结论白念珠菌在我院侵袭性酵母菌感染中占主导地位,虽然近年来我院侵袭性酵母耐药情况有所好转,但仍需进一步做好真菌药物敏感性研究。     

慢性前列腺炎患者假丝酵母菌感染及耐药性分析

目的 了解慢性前列腺炎与假丝酵母菌感染的相关性及假丝酵母菌的耐药性。方法 采用常规沙堡平板分离360例慢性前列腺炎患者的前列腺液标本中的假丝酵母菌,疑似菌落用ATB Expression鉴定仪进行鉴定。采用ATB-Fungus真菌药敏板,对假丝酵母菌株进行药敏试验。结果 11．7％前列腺液标本（42／360）似丝酵母菌阳性,其中自假丝酵母菌23例（54．7％）,近平滑假丝酵母菌13例（30．9％）,其它6例（14．3％）。假丝酵母菌菌株对两性霉素B和制霉菌素敏感率均为100％,其次为酮康唑,敏感率为97．0％;对5-氟胞嘧啶耐药性最强,其耐药率为56．5％。结论 白假丝酵母菌和近平滑假丝酵母菌是慢性前列腺炎假丝酵母菌感染的优势菌种,假丝酵母菌株最敏感的药物是两性霉素B和制霉菌素。     

哈尔滨地区假丝酵母菌DNA异质性及药物敏感性分析

研究假丝酵母菌的DNA异质性及药物敏感性,为预防和监控院内假丝酵母菌感染奠定基础。将临床分离的假丝酵母菌菌株,用科玛嘉显色培养基鉴定菌种,经纸片扩散法进行药敏试验,应用随机扩增多态性DNA（RAPD）技术对这些菌株进行基因分型。结果显示：93株假丝酵母菌中白假丝酵母菌68株,非白假丝酵母菌25株,所有菌株对制霉菌素,两性霉素B两种药物的敏感率最高（100％）,酮康唑其次（70．9％）,氟康唑的敏感率最低（50．5％）,引物1和引物2将来源不同的68株白假丝酵母菌分别分成4型（A1、B1、C1、D1）和6型（A2、B2、C2、D2、E2、F2）。哈尔滨地区的假丝酵母菌感染以白假丝酵母菌为主,且主要为A1、B1型（引物1）或A2、B2型（引物2）;基因型与药敏谱无明显相关性。     

Diabetes mellitus and candidiases

Patients in various clinical states of diabetes mellitus (according to the recommendation of the American Diabetes Association) as a primary diagnosis were examined for fungal infections by Candida species. Candida spp. were detected in urine, in the material taken from the mouth cavity, nails, skin lesions, ears and eyes, by cultivation on the Sabouraud agar, CHROMagar Candida, and by saccharide assimilation. In the group of diabetics with symptoms of oral candidiasis and denture stomatitis C. albicans was identified in 8 cases, C. tropicalis in 3, C. parapsilosis in 2; 1 strain of C. guilliermondii was also isolated. In patients with urinary tract infections the presence of C. albicans was shown in 12 cases; C. parapsilosis was detected in 6 cases and two strains of each C. tropicalis and C. krusei were also isolated. In patients with leg ulcers C. albicans (25 cases), C. parapsilosis (5), C. tropicalis (3) and one strain of each C. krusei and C. robusta were isolated. Otomycosis was associated with one strain of C. albicans, C. parapsilosis, C. tropicalis and C. guilliermondii. C. albicans was most frequently associated with onychomycosis, paronychia and endophthalmitis; C. parapsilosis was the second most rated yeast.     

Evaluation of biochemical and serological methods to identify and clustering yeast cells of oral Candida species by CHROMagar test, SDS-PAGE and ELISA.

The purpose of this work was to evaluate biochemical and serological methods to characterize and identify Candida species from the oral cavity. The strains used were five Candida species previously identified: C. albicans, C. guilliermondii, C. parapsilosis, C. krusei, C. tropicalis, and Kluyveromyces marxianus, as a negative control. The analyses were conducted through the SDS-PAGE associated with statistical analysis using software, chromogenic medium, and CHROMagar Candida (CA), as a differential medium for the isolation and presumptive identification of clinically important yeasts and an enzyme-linked immunoabsorbent assay (ELISA), using antisera produced against antigens from two C. albicans strains. This method enabled the screening of the three Candida species: C. albicans, C. tropicalis, and C. krusei, with 100% of specificity. The ELISA using purified immunoglobulin G showed a high level of cross-reaction against protein extracts of Candida species. The SDS-PAGE method allowed the clustering of species-specific isolates using the Simple Matching coefficient, S(SM) = 1.0. The protein profile analysis by SDS-PAGE increases what is known about the taxonomic relationships among oral yeasts. This methodology showed good reproducibility and allows collection of useful information for numerical analysis on information relevant to clinical application, and epidemiological and systematical studies.     

26S rDNA单链构象多态性分析在临床酵母菌菌种鉴定中的应用

摘要： 【目的】探讨酵母菌临床分离株26S rDNA D1/D2区序列种内相似性和种间差异性的快速检测方法,为临床酵母菌菌种鉴定方法的改进奠定基础。调查北京地区临床酵母菌的种群多样性,为国内酵母菌感染的流行病学研究提供新的基础数据。【方法】用5种常见临床酵母菌种的模式和权威菌株作为标准参考菌株,从北京四家综合性医院收集临床酵母菌260余株,PCR扩增其26S rDNA D1/D2区,对扩增产物进行单链构象多态性（Single-Strand Conformation Polymorphism,SSCP）分析和序列测定分析。【结果】常见病原酵母菌26S rDNA D1/D2区的SSCP图谱具有明显的种间差异性和种内相似性,可以通过该方法对菌株进行初步的菌种鉴定。D1/D2-SSCP和序列分析相结合,对260余株临床酵母菌进行了菌种鉴定,共鉴定有10个属20个种,优势属为念珠菌属(Candida),优势种及其所占比例分别是：C. albicans (57.7%), C. parapsilosis (10.0%), C. tropicalis (9.2%), C. glabrata (6.7%)和C. krusei (5.8%),并发现过去从未或很少报道致病的酵母菌种,愈来愈多地出现在临床分离菌株中。【结论】 26S rDNA D1/D2区的SSCP图谱分析为临床酵母菌株的快速鉴定提供了新的方法;北京地区酵母菌临床分离株呈种群多样性分布,C. albicans虽然仍占优势,但其它念珠菌种的比例已达42%。     

Identification of yeasts of clinical interest on CHROMagar Candida culture medium.

The efficiency of CHROMagar Candida was evaluated as a medium for the presumptive identification of yeasts. We tested 36 different yeast species, pertaining to 9 genera: one Blastoschizomyces, 20 Candida, five Cryptococcus, two Geotrichum, one Kloeckera, two Pichia, three Rhodotorula, one Saccharomyces and one Trichosporon, to determine the colony colors and characteristics on this medium. Afterwards, we identified 2,230 strains isolated directly on CHROMagar Candida from clinical samples by specific colouration and morphology of the colonies after 72 hours. Their results were compared with standard methods for the identification of yeasts. The sensitivity and specificity were both superior to 97% for all strains, 100% and 100% for Candida albicans, 97.3% and 99.9% for Candida glabrata, 92.3% and 99.6% for Candida krusei, 90.3% and 99.6% for Candida parapsilosis, and 100% and 100% for Candida tropicalis. CHROMagar Candida is a very useful medium for the culture of clinical samples; its use for identification of yeasts has an accuracy of 97.5%, close to 100% of conventional methods.     

Etiologic agents of fungemia in hospitalized patients]

The aim of performed examinations was the analysis of fungi as etiological agents of blood infections in patients hospitalized in surgical wards, internal medicine wards and intensive care units of the Medical Academy Central Clinical Hospital in Warsaw. Blood samples from patients hospitalized in 1997 were examined. Peripheral blood samples were incubated in BacT/Alert system (Organon Teknika, USA). Positive blood samples were inoculated on Sabouraud medium with chloramphenicol (bioMerieux, France or Oxoid, England). The time of cultivation was from 48 hours to 7 days at 30 degrees C. Fungal strains were identified by standard mycological procedures with the use of chromogenic medium BBL CHROMagar Candida (Becton Dickinson, USA) and biochemical test ID 32 C (bioMerieux, France). Susceptibility of strains to antifungal agents was determined by ATB FUNGUS method (bioMerieux, France). The total number of positive blood cultures in 1997 was 1380. Forty-two fungal strains were isolated from blood samples (3%). Strains belonged to the following species: C. albicans (17 isolates), C. parapsilosis (15), C. glabrata (3), melibiosica (2), C. pelliculosa (2), C. guilliermondii (1), C. tropicalis (1) and T. beigelii (1). Among fungi cultured from patients hospitalized in operative wards dominated C. parapsilosis (11) and C. albicans (10) strains, whereas from patients hospitalized in conservative wards most often C. albicans (6) strains were isolated. Candida strains were mostly susceptible to antifungal agents tested. It was interesting to culture Trichosporon beigelii (T. cutaneum) strain as an etiological agent of fungemia. This strain was multidrug-resistant.     

Comparison between conventional methods, ChromAgar Candida® and PCR method for the identification of Candida species in clinical isolates

The increase in the incidence of yeast species causing fungemia in susceptible immunocompromised patients in the last two decades and the low sensitivity of conventional blood culture has led to the need to develop alternative approaches for the early detection and identification of causative species. The aim of this study was to compare the usefulness of molecular testing by the polymerase chain reaction (PCR) and conventional methods to identify clinical isolates of different species, using the ID32C ATB system (bioMérieux, France), chromogenic culture Chromagar Candida? (CHROMagar, France) and morphogenesis in corn meal agar. We studied 79 isolates, in which the most prevalent species using the system ID32C and PCR was C. albicans, followed by C. tropicalis, C. glabrata and C .krusei. PCR patterns obtained for the identification of clinical isolates were stable and consistent in the various independent studies and showed good reproducibility, concluding that PCR with species-specific primers that amplify genes ITS1 and ITS2 for rRNA or topoisomerase II primers is a very specific and sensitive method for the identification of C. glabrata, C. krusei, C. albicans, and with less specificity for C. tropicalis.     

Cell-surface hydrophobicity of Candida species as determined by the contact-angle and hydrocarbon-adherence methods

Cell-surface hydrophobicities of six Candida species were studied by two methods: measurement of the contact angle, and partitioning with aqueous-hydrocarbon (n-octane, n-hexadecane and p-xylene) mixtures. C. tropicalis, C. glabrata and C. krusei adhered better to the hydrocarbons than did C. albicans, C. stellatoidea and C. parapsilosis. Contact angles for the less adherent species were smaller than those for the more adherent species. Thus the two methods gave results that were similar overall and indicated that C. tropicalis, C. glabrata and C. krusei have greater cell-surface hydrophobicities than C. albicans, C. stellatoidea and C. parapsilosis.     

Characterization of Candida Species from Different Populations in Taiwan

The opportunistic Candida species existing as part of commensal microbiota in humans are usually the etiological agents causing infections. We investigated whether isolates collected from different age groups, hospital units, and sources have distinct characteristics. A total of 913 isolates comprising 395 Candida albicans, 230 Candida tropicalis, 202 Candida glabrata, 62 Candida parapsilosis, 13 Candida krusei, and 11 of other six species were analyzed. Urine was the most common source (41.2%), followed by sputum (16.3%), blood (15.2%), and others (27.3%). Candida albicans and C. parapsilosis were more prevalent in the working group [from 19 to 65 years], whereas C. tropicalis and C. glabrata were more prevalent in the elder one (≥ 66 years). We found that the age of patients and the source of isolates affect the distribution of species. On the other hand, the drug susceptibility of isolates was associated with fungal species and whether patients were hospitalized.     

几种念珠菌DNA总含量的流式细胞分析

应用流式细胞术(FCM)对处于稳定生长阶段的念珠菌属(Candida)的7种8株念珠菌进行了DNA总含量的流式细胞(FCM)分析。这8株念珠菌是:白念珠菌(C.albicans)2株,热带念珠菌(C.tropicalis),克柔念珠菌(C.krusei),近平滑念珠菌(C.parapsiolosis),乳酒念珠菌(C.kefyr),白念珠菌星形变种(C.stellatoidea),即血清B型白念珠菌,季也蒙念珠菌(C.guilliermondii)各一株。应用EB一步插入法染色,用鸡红细胞(CRBC)作为内参标准进行DNA总含量测定。分析结果表明:稳定生长阶段的组方图上,大多数念珠菌细胞处于DNA合成周期的G_0/G_1期;DNA总含量有明显的种间和种内差异。