Population structure and conservation biology of the endangered fern Trichomanes speciosum Willd. (Hymenophyllaceae) at its northern distributional limit

Genetic diversity in the Killarney fern, Trichomanes speciosum Willd. has been investigated in south-western Scotland, the northern-most limit of the distribution of the sporophyte. T. speciosum is unique amongst European pteridophytes in that both phases of the life cycle are perennial and capable of vegetative propagation. Within sites no variation was revealed by allozyme electrophoresis, even where both generations were growing together. In contrast, diversity was observed among sites, with seven different multilocus phenotypes (MLPs) present in the area. Two of these MLPs covered large areas while the others were restricted to one, or few localities. Asexual reproduction of the gametophyte via gemmae is assumed to be the main means of dispersal in recent times, allowing single clones to become widespread, while the overall genetic variability may be attributed to sexual reproduction and spore dispersal in historic times under more favourable climatic conditions. We suggest that it is not inbreeding, nor lack of genetic variation that limits sporophyte production, but rather the prevailing climatic conditions. The sporophyte is extremely rare and vulnerable. However, when the gametophyte is considered, the species is neither threatened with extinction, nor does it appear to face the danger of marked genetic erosion, because the long-lived gametophyte stage contains all of the genetic variability present in the area and can be regarded as a valuable 'seed-bank'.     

Comparative development of the sporophyte–gametophyte junction in six moss species

Developmental anatomy of the sporophyte–gametophyte junction in six moss species is described with special reference to sporophyte penetration into the gametophytic tissue. The sporophyte–gametophyte junction in mosses is classified into two types based on vaginula morphology: in the “true vaginula” type, the junction involves only an epigonium derived from the archegonium, and in the other “shoot vaginula” type, it involves a shoot and an epigonium. In both of the types, the sporophyte penetrates into an epigonial tissue accompanied by degeneration of epigonium cells under the developing sporophyte. In the “shoot vaginula” type, the sporophyte further penetrates into the conducting strand or similar cells that seem to be induced by stimulation of fertilization. It is likely that the difference in growth rate between the epigonium and the capped sporophyte is a mechanical force for sporophyte penetration.     

Patterns of Clonal Diversity in Dicranopteris linearis on Mauna Loa,Hawaii1

The clonal mat-forming fern, Dicranopteris linearis (N. L. Burm.) Underw., dominates vast areas of rainforests on the windward slopes of Mauna Loa Volcano on the island of Hawai'i. Because clone size has important ecological and evolutionary consequences in such a dominant species, we used isozyme analysis to investigate clone size and other aspects of genetic diversity and reproduction over a broad range of environmental conditions on primary successional sites (pahoehoe lava substrates). Isozyme analysis provided a measure of the upper limit of clonal size in this interdigitating clonal species. Each 0.5-ha primary successional site on Mauna Loa was comprised of a minimum of two to four clones. Genetic diversity in Dicranopteris was low; of 32 putative loci investigated, only 4 were polymorphic, with 2 or 3 alleles/locus. Over the 17 study locations on Mauna Loa and Kilauea Volcanoes, we identified nine multilocus genotypes based on unique combinations of allozymes. Seven of the nine genotypes were heterozygous for at least one locus, evidence of an intergametophytic mating system. Highly dispersible spores, coupled with intergametophytic mating should promote higher genetic diversity. We propose that the following factors contributed to low genetic diversity: founder effects; extreme isolation from mainland gene pools; high potential for mating among different gametophytes produced from the same sporophyte; relatively low numbers of safe sites for gametophyte establishment over space and time; and long-term reliance on vegetative growth. Leaf phenotypes were associated with genotype, but also with environmental conditions. Enough variability within a genotype existed to support the current treatment of Hawaiian Dicranopteris as one species. Vegetative growth was the primary means by which Dicranopteris covered the landscape. Nevertheless, spore production, gametophyte establishment, and sexual reproduction were absolutely essential for colonization of the few favorable microsites available on pahoehoe lava substrates of Mauna Loa following lava eruptions, dieback, and similar landscape-level disturbances.     

Migration load in males and females

Many theories have been proposed for interpreting the relative sexual mortalities in natural populations, but the effects of maladaptive genes from migrants on sexual mortality have not been examined. In this study, I systematically explore the properties of migration load in dioecious plants where gender dimorphism is determined by sex chromosomes (the XX-XY or similar system). Two stages of gene flow (pollen and seed) and two stages of selection (gametophyte and sporophyte) are jointly examined in the one- and two-locus cases. The general results show that several factors, including the maladaptive allele frequencies in migrants, migration rate, selection, and linkage disequilibria, can individually or jointly alter the relative sexual mortalities at either the gametophyte or the sporophyte stage, or both. When there are the same values between sexes in the parameters relevant to the migrant gene frequencies and two-stage selection coefficients under the additive viability model (without Y-chromosome and linkage disequilibrium effects), the average mortality is higher in ovules than in pollen since the males do not inherit the maladaptive genes from migrating pollen. The average mortality per individual in the homogametic sex is almost twice as large as that in heterogametic sex at the sporophyte stage. Under the additive viability model, the relative sexual mortalities at the gametophyte stage are negatively related to the relative sexual mortalities at the sporophyte stage.     

TRANSITION TO A LAND FLORA: PHYLOGENETIC RELATIONSHIPS OF THE GREEN ALGAE AND BRYOPHYTES

Abstract— Separate cladistic analyses of the green algae, liverworts, and hornworts are presented. Classificatory and evolutionary implications of these analyses, in addition to our previously published cladistic analyses of mosses and the embryophytes as a whole, are discussed. The embryophytes are monophyletic, and are part of a larger monophyletic group that includes some of the green algae (the "charophytes"). Important evolutionary transformations in the early phylogeny of the land plants include: (1) retention of the zygote on the haploid plant (gametophyte), with the sporophyte generation arising de novo by delaying meiosis, (2) independent elaboration of an elongate sporophyte in some liverworts, some hornworts, and in the moss-tracheophyte clade, (3) independent origin of radial (axial) symmetry in the gametophyte in some liverworts and in the moss-tracheophyte clade, (4) independent origin of leaves on the gametophyte in some liverworts and in mosses, and (5) the unique development of a branching sporophyte with multiple sporangia in the tracheophytes.     

扇蕨配子体发育与濒危机制的探讨

采用改良Knop’s固体培养基、原生境腐殖质土和红壤分别培养扇蕨（Neocheiropteris palmatopedate）孢子,光学显微镜及解剖镜下观察记录其孢子萌发及配子体发育过程,比较了3种培养方法对其配子体发育和有性繁殖的影响,并在此基础上探讨了扇蕨的濒危原因。结果表明：成熟孢子黄褐色,赤道面观为豆形,极面观椭圆形,单裂缝。孢子萌发类型为书带蕨型,原叶体发育为槲蕨型。成熟原叶体呈心脏形。毛状体在原叶体阶段出现。有性生殖周期长及配子体发育成幼孢子体的百分率低是扇蕨在配子体世代的主要濒危原因。此外,红壤固有的理化性质导致扇蕨配子体发育极其缓慢、精子器和颈卵器发生的时间间隔过长使其不能受精产生孢子体。原生植被遭受破坏引起的林下腐殖质土消失、红壤裸露,加剧了扇蕨的濒危。     

A method to establish an “immortalized F2” sporophyte population in the economic brown alga Undaria pinnatifida (Laminariales: Alariaceae)

Studies of quantitative trait loci based on genetic linkage maps require the establishment of a mapping population. Permanent mapping populations are more ideal than temporary ones because they can be used repeatedly. However, there has been no reported permanent sporophyte population of economically important kelp species. Based on the characteristics of the kelp life cycle, we proposed a method to establish, and then constructed experimentally, an “immortalized F₂” (IF₂) population of Undaria pinnatifida. Doubled-haploid “female” and “male” sporophytes were obtained through the parthenogenesis of a female gametophyte clone and the selfing of a “monoicous” gametophyte clone (originally male), respectively, and they were used as the parents. The F₁ hybrid line was generated by crossing the female and male gametophytes derived from the respective female and male parents. Full-sibling F₂ gametophyte clones, consisting of 260 females and 260 males, were established from an F₁ hybrid sporophyte. Thirty-five females and 35 males were randomly selected and paired to give rise to an IF₂ population containing 35 crossing lines. A parentage analysis using 10 microsatellite markers confirmed the accuracy of the IF₂ population and indicated the feasibility of this method. This proposed method may be adapted for use in other kelp species, and thus, it will be useful for genetic studies of kelp.     

Life history variation in gametophyte populations of the moss Ceratodon purpureus (Ditrichaceae)

The life cycles of mosses and other bryophytes are unique among land plants in that the haploid gametophyte stage is free-living and the diploid sporophyte stage is ephemeral and completes its development attached to the maternal gametophyte. Despite predictions that populations of haploids might contain low levels of genetic variation, moss populations are characterized by substantial variation at isozyme loci. The extent to which this is indicative of ecologically important life history variation is, however, largely unknown. Gametophyte plants from two populations of the moss Ceratodon purpureus were grown from single-spore isolates in order to assess variation in growth rates, biomass accumulation, and reproductive output. The data were analyzed using a nested analysis of variance, with haploid sib families (gametophytes derived from the same sporophyte) nested within populations. High levels of life history variation were observed within both populations, and the populations differed significantly in both growth and reproductive characteristics. Overall gametophytic sex ratios did not depart significantly from 1:1 within either population, but there was significant variation among families in both populations for progeny sex ratio. Some families produced predominantly male gametophytes, while others yielded predominantly females. Because C. purpureus has a chromosomal mechanism of sex determination, these observations suggest differential (but unpredictable) germination of male and female spores. Life history observations showed that male and female gametophytes are dimorphic in size, maturation rates, and reproductive output.     

ROLE OF SETTLEMENT DENSITY ON GAMETOPHYTE GROWTH AND REPRODUCTION IN THE KELPS PTERYGOPHORA CALIFORNICA AND MACROCYSTIS PYRIFERA (PHAEOPHYCEAE)1

Laboratory studies were used to examine how variation in the density of spore settlement influences gametophyte growth, reproduction, and subsequent sporophyte production in the kelps Pterygophora californica Ruprecht and Macrocystis pyrifera (L.) C. Ag. In still (non-aerated) cultures, egg maturation in both species was delayed when spores were seeded at densities 300 · mm^?2. Although the density at which this inhibition was first observed was similar for both species, the age at which their eggs matured was not. P. californica females reached sexual maturity an average of 4 days (or ～ 30%) sooner than did M, pyrifera. As observed previously in field experiments, per capita sporophyte production was negatively density dependent for both species when seeded at spore densities of 10 · mm^?2. Total sporophyte production (i.e. number · cm^?2) for both species, however, was greatest at intermediate densities of spore settlement (～ 50 spores · mm^?2). In contrast, total sporophyte production by P. californica steadily increased with increasing spore density in aerated cultures; highest sporophyte density was observed on slides seeded at a density of 1000 spores · mm^?2. Preliminary experiments with P. californica involving manipulation of aeration and nutrients indicate that inhibition of gametophyte growth and reproduction at higher densities of spore settlement in non-aerated cultures was probably caused by nutrient limitation.     

Sexual conflict and the alternation of haploid and diploid generations

Land plants possess a multicellular diploid stage (sporophyte) that begins development while attached to a multicellular haploid progenitor (gametophyte). Although the closest algal relatives of land plants lack a multicellular sporophyte, they do produce a zygote that grows while attached to the maternal gametophyte. The diploid offspring shares one haploid set of genes with the haploid mother that supplies it with resources and a paternal haploid complement that is not shared with the mother. Sexual conflict can arise within the diploid offspring because the offspring's maternal genome will be transmitted in its entirety to all other sexual and asexual offspring that the mother may produce, but the offspring's paternally derived genes may be absent from these other offspring. Thus, the selective forces favouring the evolution of genomic imprinting may have been present from the origin of modern land plants. In bryophytes, where gametophytes are long-lived and capable of multiple bouts of asexual and sexual reproduction, we predict strong sexual conflict over allocation to sporophytes. Female gametophytes of pteridophytes produce a single sporophyte and often lack means of asexual reproduction. Therefore, sexual conflict is predicted to be attenuated. Finally, we explore similarities among models of mate choice, offspring choice and segregation distortion.     

Holocene re‐colonisation,central–marginal distribution and habitat specialisation shape population genetic patterns within an Atlantic European grass species

Corynephorus canescens (L.) P.Beauv. is an outbreeding, short‐lived and wind‐dispersed grass species, highly specialised on scattered and disturbance‐dependent habitats of open sandy sites. Its distribution ranges from the Iberian Peninsula over Atlantic regions of Western and Central Europe, but excludes the two other classical European glacial refuge regions on the Apennine and Balkan Peninsulas. To investigate genetic patterns of this uncommon combination of ecological and biogeographic species characteristics, we analysed AFLP variation among 49 populations throughout the European distribution range, expecting (i) patterns of SW European glacial refugia and post‐glacial expansion to the NE; (ii) decreasing genetic diversity from central to marginal populations; and (iii) interacting effects of high gene flow and disturbance‐driven genetic drift. Decreasing genetic diversity from SW to NE and distinct gene pool clustering imply refugia on the Iberian Peninsula and in western France, from where range expansion originated towards the NE. High genetic diversity within and moderate genetic differentiation among populations, and a significant pattern of isolation‐by‐distance indicate a gene flow drift equilibrium within C. canescens, probably due to its restriction to scattered and dynamic habitats and limited dispersal distances. These features, as well as the re‐colonisation history, were found to affect genetic diversity gradients from central to marginal populations. Our study emphasises the need for including the specific ecology into analyses of species (re–)colonisation histories and range centre–margin analyses. To account for discontinuous distributions, new indices of marginality were tested for their suitability in studies of centre–periphery gradients.     

Genetic diversity and historical population structure in the New Zealand mayfly Acanthophlebia cruentata

1. Nucleotide sequences of a 280 base pair region of the cytochrome b gene were used to assess genetic diversity and to infer population histories in the New Zealand mayfly Acanthophlebia cruentata. 2. A hierarchial examination of populations from 19 streams at different spatial scales in the central and northern North Island of New Zealand found 34 haplotypes. A common haplotype was found in all central region streams and unique haplotypes in northern streams. Several central streams had region specific haplotypes with genetically differentiated populations at the 70–100 km scale. 3. Haplotype diversity was high (0.53–0.8) at most sites, but low (0–0.22) in some central sites. amova analyses found significant genetic diversity among regions (69%) and among catchments (58%). Most population pairwise F_ST tests were significant, with non‐significant pairwise tests among sites in the central region and pairs of sites between neighbouring streams. 4. The levels of sequence divergence are interpreted as the result of Pleistocene divergence in multiple refugia, leading to the evolution of regionally unique haplotypes. The low diversity in some central region populations may result from recent colonisation following local extinctions, associated with volcanic events.     

An in vitro whole plant selection system: paraquat tolerant mutants in the fern Ceratopteris

Summary A whole plant selection system using the haploid gametophyte generation of the fern Ceratopteris richardii has been developed to select for mutations that confer resistance or tolerance to various selection pressures. The expression of the mutations can be analyzed and characterized in both the haploid gametophyte and diploid sporophyte generations. Genetic analyses are facilitated by the fern's rapid life cycle and the ease of manipulating the gametophyte generation. Selection for tolerance to the herbicide paraquat has yielded two mutants which have an increased tolerance to the herbicide in both the gametophyte and sporophyte generations. Both mutants exhibit single nuclear gene inheritance patterns and appear to be closely linked or allelic.     

Developing sporophytes transition from an inducible to a constitutive ecological strategy of desiccation tolerance in the moss Aloina ambigua: effects of desiccation on fitness

Background and Aims Two ecological strategies of desiccation tolerance exist in plants, constitutive and inducible. Because of difficulties in culturing sporophytes, very little is known about desiccation tolerance in this generation and how desiccation affects sexual fitness.Methods Cultured sporophytes and vegetative shoots from a single genotype of the moss Aloina ambigua raised in the laboratory were tested for their strategy of desiccation tolerance by desiccating the shoot–sporophyte complex and vegetative shoots at different intensities, and comparing outcomes with those of undried shoot–sporophyte complexes and vegetative shoots. By using a dehardened clonal line, the effects of field, age and genetic variance among plants were removed.Key Results The gametophyte and embryonic sporophyte were found to employ a predominantly inducible strategy of desiccation tolerance, while the post-embryonic sporophyte was found to employ a moderately constitutive strategy of desiccation tolerance. Further, desiccation reduced sporophyte fitness, as measured by sporophyte mass, seta length and capsule size. However, the effects of desiccation on sporophyte fitness were reduced if the stress occurred during embryonic development as opposed to postembryonic desiccation.Conclusions The effects of desiccation on dehardened sporophytes of a bryophyte are shown for the first time. The transition from one desiccation tolerance strategy to the other in a single structure or generation is shown for only the second time in plants and for the first time in bryophytes. Finding degrees of inducible strategies of desiccation tolerance in different life phases prompts the formulation of a continuum hypothesis of ecological desiccation tolerance in mosses, where desiccation tolerance is not an either/or phenomenon, but varies in degree along a gradient of ecological inducibility.     

Sex and the fixation of single favourable mutations

Sexual populations will accumulate favourable mutations more rapidly than asexual populations. This is true if it is often the case that two different favourable mutations can be found to be spreading simultaneously through populations. It is argued here that sexual species will incorporate single favourable mutations more quickly than asexual “species”, if the latter are multi-clonal. Thus one mutation can spread to fixation within a sexual species but in an asexual “species” with N_c clones at least N_c mutations must occur if the mutation is to be subsequently found in every member of the “species”. Asexual “species” may minimise this disadvantage by evolving polyploidy or occasional episodes of hybridisation. Both are in fact common in asexual “species”.     

Generating Autotetraploid Sporophytes and Their Use in Analyzing Mutations Affecting Gametophyte Development in the Fern Ceratopteris

The haploid gametophytes of the fern Ceratopteris richardii are autotrophic and develop independently of the diploid sporophyte plant. While haploid genetics is useful for screening and characterizing mutations affecting gametophyte development in Ceratopteris, it is difficult to assess whether a gametophytic mutation is dominant or recessive or to determine allelism by complementation analysis in a haploid organism. This report describes how apospory can be used to produce genetically marked polyploid sporophytes whose gametophyte progeny are heterozygous for mutations affecting sex determination in the gametophyte and a known recessive mutation affecting the phenotype of both the gametophyte and sporophyte. The segregation ratios of wild-type to mutant phenotypes in the gametophyte progeny of polyploid sporophyte plants indicate that all of the mutations examined are recessive. The presence of many multivalents and few univalents in meiotic chromosome preparations of spore mother cells confirm that the sporophyte plants assayed are polyploid. The DNA content of the sperm of their progeny gametophytes was also found to be approximately twice that of sperm from wild-type haploid gametophytes.     

Population Genetic Analyses of Transplanted Eelgrass (Zostera marina) Beds Reveal Reduced Genetic Diversity in Southern California

Seagrass ecosystems fulfill ecologically and economically valuable functions in coastal marine environments. Unfortunately, seagrass beds are susceptible to natural and human disturbances, and their distrubution is declining worldwide. Although intentional disturbance of seagrass beds must be mitigated pursuant to U.S. law, to date mitigation of seagrass beds has not prevented a net loss of habitat. Transplantation of vegetative material from small areas of nearby beds is the primary method of seagrass mitigation. Restoration research on seagrasses has focused primarily on establishment of the plants and secondarily on the functional equivalency of the habitats. We questioned whether transplanted seagrass beds were comparable to “natural” beds in terms of genetic diversity and structure. We sampled Zostera marina L. (eel-grass) from 12 sites in the highly urbanized area of San Diego County and from pristine sites in Baja California. Using allozyme electrophoresis, we determined that genetic diversity (percentage of polymorphic loci, allele richness, expected and observed heterozygosities, and proportion of genetically unique individuals) was significantly reduced in transplanted eelgrass beds. Eelgrass from Baja California exhibited the highest genetic diversity. Based on Wright's F statistics, most of the genetic variation was distributed within rather than among sites (F_ST= 0.139), and the degree of genetic structure was only moderate at the greatest geographical scale (San Diego—Baja). Using a spatial statistical analysis (second-order analysis), we found virtually no evidence for nonrandom distribution of alleles or genotypes at scales of 3–50 m within beds. We discuss several hypotheses for reduced genetic diversity in transplanted eelgrass beds, including transplantation protocol, small size of transplantations, and reduced or failed sexual reproduction.     

Correlation in the tolerance to ozone between sporophytes and male gametophytes of several fruit and nut tree species (Rosaceae)

We analyzed relative sensitivities to ozone partial pressure for male gametophytes (pollen and pollen tubes) of five tree-crop species in the family Rosaceae (almond, apple, apricot, nectarine/peach, pear) and of four cultivars of almond. Relative sensitivities to ozone partial pressure were previously described using field-based, whole-plant, physiological measurements for the sporophytes of each of the species and cultivars used in this study. Our objective was to determine the extent of correlation between sporophyte and gametophyte responses to ozone among and within these tree species. If the relative sensitivities prove to be similar for the two generations, two research strategies become possible for breeders interested in developing new cultivars with improved tolerance to atmospheric ozone: First, because screening large numbers of sporophytes for their responses to ozone partial pressure is a formidable task, exploiting the much more easily manipulated male gametophyte generation for large-scale screening of individuals for ozone tolerance could greatly facilitate identification and selection of tolerant genotypes. Second, it opens the possibility of applying selection pressure to the gametophyte generation (as during pollen germination or pollen tube growth) to favor production of ozonetolerant progeny. Results indicate that, among and within species, relative responses of pollen tube growth to ozone partial pressure are highly correlated with that of the sporophytes. Pollen germination was inhibited by ozone treatments for all but one species (pear), but differences among and within species were neither significant nor (with the exception of pear) did they correlate with relative sporophyte sensitivities.