Magnetic alignment in mammals and other animals

Magnetic alignment (MA) constitutes the simplest directional response to the geomagnetic field. In contrast to magnetic compass orientation, MA is not goal directed and represents a spontaneous, fixed directional response. Because animals tend to align their bodies along or perpendicular to the magnetic field lines, MA typically leads to bimodal or quadrimodal orientation, although there is also growing evidence for a fixed unimodal orientation not necessarily coinciding with the magnetic cardinal directions. MA has been demonstrated in diverse animals including insects, amphibians, fish, and mammals. Alignment can be expressed by animals during resting as well as on the move (e.g. while grazing, hunting, feeding, etc.). Here, we briefly survey characteristic features and classical examples of MA and review the current knowledge about the occurrence of MA in mammals. In addition, we summarize what is known about mechanisms underlying MA and discuss its prospective biological functions. Finally, we highlight some physiological effects of alignment along the magnetic field axes reported in humans. We argue that the phenomenon of MA adds a new paradigm that can be exploited for investigation of magnetoreception in mammals.     

Morphometric and genetic differentiation of diploid and hexaploid populations of Aster amellus agg. in a contact zone

The aim of this study is to determine the origin, genetic relationships and morphological differences between diploid and hexaploid cytotypes of Aster amellus aggregate (Asteraceae) at their contact zone in the Czech Republic. We collected data on morphological and isozyme variation in a range of populations of the two cytotypes. We also studied the plasticity of the morphological traits in a common garden. The results suggest that hexaploid individuals of Aster amellus aggregate are of autopolyploid origin. The isozyme data indicate that diploids and hexaploids have different evolutionary histories. This, together with previous detailed cytological and ecological analyses, suggests that there is a secondary contact zone between the two cytotypes in the Czech Republic. The results of multivariate morphometric analyses and data on plasticity of the morphological traits indicate that it is not possible to distinguish the two cytotypes morphologically. The previously published morphological distinction between the cytotypes is thus not supported.     

Can We Distinguish Plant Species that are Rare and Endangered from Other Plants Using Their Biological Traits?

Understanding the factors responsible for species rarity is crucial for effective species conservation. One possible approach to obtaining information about causes of species rarity is to compare rare and common species. We analyzed the biological and ecological traits of critically endangered (CR) plant species of the Czech Republic. We compared the vegetative, generative and ecological traits of CR species with: i) common closely related species (a form of phylogenetic correction), ii) common closely related species sharing the same habitat (i.e., excluding pairs not sharing the same habitat, because many differences in species traits can be caused by adaptation to a specific habitat type) and iii) all plants of the Czech Republic. Information about species traits was mainly obtained from literature and databases. Comparison with common closely related species showed that CR species are smaller, flower for shorter periods, and have higher proportions of self-compatibility and higher terminal velocities. CR species also differ in their mode of dispersion, and their ecology and distribution. Comparison with species from the same habitat gave similar results. Comparison with the whole flora produced slightly different results, with additional differences in pollination mode and seed mass. The results of all three types of comparison suggest that critically endangered species of the Czech Republic are small, competitively inferior species, with some differences in the generative part of their life cycle, and occur mainly in open, unproductive habitats.     

Structural conservation and food habit-related liver expression of uncoupling protein 2 gene in five major Chinese carps

The full-length cDNA of grass carp (Ctenopharyngodon idellus) and silver carp (Hypophthalmichthys molitrix) uncoupling protein 2 (UCP2) was obtained from liver. The grass carp UCP2 cDNA was determined to be 1152 bp in length with an open reading frame that encodes 310 amino acids. Five introns (Intron 3, 4, 5, 6 and 7) in the translated region, and partial sequence of Intron 2 in the untranslated region of grass carp UCP2 gene were also obtained. Gene structure comparison between grass carp and mammalian (human and mouse) UCP2 gene shows that, the UCP2 gene structure of grass carp is much similar to that of human and mouse. Partial UCP2 cDNA sequences of bighead carp (Aristichthys nobilis) and mud carp (Cirrhinus molitorella), were further determined. Together with the common carp (Cyprinus carpio) UCP2 sequence from GenBank (AJ243486), multiple alignment result shows that the nucleotide and amino acid sequences of the UCP2 gene, were highly conserved among the five major Chinese carps that belong to four subfamilies. Using beta-actin as control, the ratio UCP2/beta-actin mRNA (%) was determined to be 149.4 +/- 15.6 (common carp), 127.4 +/- 22.1(mud carp), 96.7 +/- 12.7 (silver carp), 94.1 +/- 26.8 (bighead carp) and 63.7 +/- 16.2 (grass carp). The relative liver UCP2 expression of the five major Chinese carps, shows a close relationship with their food habit: benthos and detritus-eating fish (common carp and mud carp) > planktivorious fish (silver carp and bighead carp) > herbivorous fish (grass carp). We suggest that liver UCP2 might be important for Chinese carps to detoxify cyanotoxins and bacteria in debris and plankton food.     

Factors influencing fatty acid composition of common carp (Cyprinus carpio) muscle

There is evidence that n-3 highly unsaturated fatty acids (n-3 HUFA), especially eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA), are beneficial for human health, especially for the cardiovascular system. The sources of n-3 HUFA, including EPA and DHA, are scarce in diet consumed by the Czech population. Thus, it would be beneficial to generally increase fish consumption and also to increase the content of the beneficial fatty acids (FA) in locally produced fish and other products. Therefore the overall aim of this paper was to review factors influencing lipid content and composition in common carp, which is the major cultured fish in the Czech Republic, and to identify long term sustainable ways for increasing the beneficial fatty acids in the carp flesh. We conclude that there are several ways to improve the FA composition of common carp in the traditional pond production. High amount of natural food, good supplemental diet containing high level of alpha-linolenic acid (ALA) and suitable processing and cooking were identified as the most important ones.     

Aquarium hitchhikers: attached commensals imported with freshwater shrimps via the pet trade

The keeping of home aquaria is one of the most popular hobbies globally. In contrast to the ornamental fish trade, decapod crustaceans such as shrimps, crayfish and crabs are relatively new to the pet trade. Nevertheless, the popularity of ornamental shrimp in freshwater aquaria has rapidly increased in recent years. Indonesia is one of the leading producers and exporters of ornamental aquatic animals globally and the Czech Republic is a gateway for these animals into the European Union territory. The pathway for introductions of organisms unintentionally moved in association with ornamental shrimps via the international trade has to date not been evaluated. We examined a small number of shrimps imported from Indonesia into the Czech Republic in May 2015 and found large numbers of the protozoan Vorticella sp., one species of scutariellid temnocephalidan (Caridinicola sp.), and one species of bdelloid rotifer, associated with two species of atyid shrimps, indicating an invasion risk from fauna carried unintentionally by this vector. Although our observations were limited in scale, we estimate the total number of commensal fauna imported into the Czech Republic with ornamental shrimps via the pet trade to be in the order of hundreds of thousands per month. As attached organisms can directly or indirectly cause diseases in certain species of decapod crustaceans, we recommend five steps to reduce risks of introduction of “hitchhikers” to aquaria and wildlife.     

Oestrous females investigate the unfamiliar male more than the familiar male in both commensal and non-commensal populations of house mice

We studied female preferences for familiar and unfamiliar males. The subjects were laboratory-born house mice: (1) non-commensal Mus musculus domesticus from the eastern part of Syria along the Euphrates River; and (2) commensal M. m. musculus from the Czech Republic. Pair-choice preference tests have revealed that oestrous females of both populations sniffed towards unfamiliar males more than familiar males. In the case of females exhibiting postpartum oestrus, this preference was less pronounced and statistically not significant. Thus, our mice clearly exhibited the behavioural pattern known from commensal populations of polygynous and/or promiscuous M. m. domesticus. We found no inverse tendency to seek proximity to the familiar male that has been previously reported from closely related and presumably monogamous aboriginal mouse Mus spicilegus. We conclude that neither commensal M. m. musculus, nor non-commensal M. m. domesticus, are likely to share a monogamous mating system with mound-building mice.     

Cytogeographical survey ofEleocharis subser.Eleocharis in Europe 1:Eleocharis palustris

Chromosome numbers forEleocharis palustris subsp.palustris (based on 70 samples from Austria, Bulgaria, Croatia, the Czech Republic, Germany, Greece, Hungary, Lithuania, Romania, Russia, Slovakia, Slovenia, and Sweden) andEleocharis palustris subsp.vulgaris (based on 74 samples from Austria, the Czech Republic, Denmark, Germany, Ireland, Latvia, Luxembourg, the Netherlands, Portugal, and Sweden) are given. Also the chromosome number estimates based on relative DNA contents of plants from 8 localitiesE. palustris subsp.palustris from Croatia, the Czech Republic, Germany, Italy, Israel, and Slovenia, and from 18 localities ofE. palustris subsp.vulgaris from the Czech Republic, Germany and Sweden are included. InE. palustris subsp.palustris, 2n=16 prevailed, the mixoploid 2n=15, 16 was rare and a lone hypoploid 2n=15 was detected. InE. palustris subsp.vulgaris 2n=38 was most frequently detected, the hyperploid 2n=39 and mixoploid 2n=38, 39 were common, and the hypoploid 2n=36 and mixoploids in which 2n ranges from 36 to 42 were rarer. Distribution maps based on plants investigated either by chromosome counting or by flow cytometry, augmented by similar data from published sources are given for both subspecies in Europe.     

Geographic variation in growth responses in Phragmites australis

Phragmites australis is a cosmopolitan wetlands species occurring in a wide range of climatic habitats. It can be assumed that adaptations to climate have evolved to enable the synchronization of growth with the seasonality of the environment. To study these adaptations, European P. australis was collected in different geographic regions, and grown in common environments situated in the Czech Republic, Denmark and The Netherlands.Phragmites australis originating from higher latitudes showed higher relative length growth rates (RLGR), and flowered earlier in time than that from lower latitudes. Plants from Spain even continued growth until the first autumn frosts. When grown in the different common environments, population differences were found in RLGR, but no general trend was apparent. On average, shoots started to grow 2 weeks earlier in The Netherlands than in Denmark and 6 weeks earlier than in the Czech Republic. These differences could be largely related to lower spring temperatures in the latter two countries. When shoot-growth was plotted against the temperature sum, no differences in RLGR between Denmark and The Netherlands were apparent, whereas shoot-growth was slower in the Czech Republic.Results from a greenhouse experiment showed that seedlings from southern populations formed taller but fewer shoots and thicker but shorter rhizomes than those from northern populations, irrespective of total dry weight. They also allocated more dry matter to stems at the expense of leaves, whereas no differences in allocation to below-ground plant parts were found.It was concluded that populations of P. australis showed clinal variation in (i) the length of the growing season, (ii) time of flowering, and (iii) morphology and biomass allocation. These results are discussed with respect to the possible effects of global warming on population functioning.     

Comparison of gemma production among three Lophozia species during the growing season

The extent and seasonal pattern of asexual reproduction and ability to germinate in the rare liverwort Lophozia ascendens and the common liverworts L. ventricosa and L. longiflora were studied in the Boubínský prales National Nature Reserve in Šumava Mts. (Bohemian Forest), South Bohemia, Czech Republic. Asexual reproduction was quantified as the number of gemmae produced per individual shoot. Numbers of gemmae per shoot among sampling months differed significantly; increase of gemma production was delayed in L. ascendens in comparison with gemma production of L. ventricosa and L. longiflora. We suggest that gemma production is influenced by environmental factors, mainly air humidity. Germinability of gemmae was low in early spring, highest in August and September and slightly depressed in October. This pattern suggests that rather mild winters in the Czech Republic cause the lower mortality of shoots during winter and the environmental pressure towards the production of dormant gemmae is not a prominent factor affecting the population dynamics of the species under study.     

Origin and genetic structure of white-tailed sea eagles (<Emphasis Type="Italic">Haliaeetus albicilla</Emphasis>) in the Czech Republic: an analysis of breeding distribution,ringing data and DNA microsatellites

The population of white-tailed sea eagles (Haliaeetus albicilla) in the Czech Republic declined dramatically during the twentieth century. None were observed in the area for more than 60 years until population recoveries were observed beginning in the 1980s. It is currently estimated that 25–30 breeding pairs of white-tailed sea eagles nest in the Czech Republic. This article analyses surveillance data from three periods between 1973 and 2003 on the occurrence and nesting of white-tailed sea eagles in the Czech Republic. We investigated recolonization of European white-tailed sea eagles in the Czech Republic in terms of migration patterns and population structures. Bird ringing data suggest the Czech population may be recovered from various areas encompassing northern Europe. Using data collected by DNA microsatellite, no population structure was revealed through Bayesian and cluster analyses with an existing Hardy–Weinberg equilibrium, which suggests mixed panmictic populations of white-tailed sea eagles in the Czech Republic and Slovakia. While analysis of genetic diversity showed no difference between recovered populations in the southeastern Czech Republic and those persisting in Slovakia, there was genetic diversity between eagles of the southeastern subpopulation and eagles in other parts of the Czech Republic. Taken together, these observations on the population structure of white-tailed sea eagles in the Czech Republic imply that other European birds contributed to the recovery of the Czech population, likely through breeding mixture with an identifiable centre in the southeastern Czech Republic.     

Tag retention and survival of juvenile bighead carp implanted with a dummy acoustic tag at three temperatures

Bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix (together, the bigheaded carps) are invasive fishes in North America that have resulted in substantial negative effects on native fish communities and aquatic ecosystems. Movement and behavior of adult bigheaded carps has been studied previously using telemetry, while similar studies with juvenile bigheaded carps have yet to be attempted. Recent technological advances in telemetry transmitters has increased the availability of tags sufficiently small enough to implant in juvenile carps. However, the effects of surgical implantation of telemetry tags on juvenile bigheaded carps have not been evaluated. We determined tag retention and survival associated with surgical implantation of acoustic telemetry tags into juvenile bighead carp (range 128–152 mm total length) at three temperatures (13, 18, and 23°C). In addition, we assessed the effect of surgically implanted transmitters on the fitness, defined as changes in weight or critical swimming speed, of carp implanted with transmitters. Survival was high among tagged fish (85%) with 47% of tags retained at the conclusion of the 45‐day study. No substantial decline in fitness of the fish was observed in tagged fish compared to untagged fish.     

Grasshoppers and bushcrickets regionally extinct in the Czech Republic: consequence of the disappearance of habitats scattered on the edge of their ranges

According to the International Union for the Conservation of Nature, taxa extinct within a region but extant in other parts of the world should be classified as Regionally Extinct (RE). A taxon is designated RE when there is no reasonable doubt that the last individual capable of reproduction within a region has died or disappeared. A taxon can also be designated RE if it previously but no longer visited a particular region. The species Arcyptera fusca, Arcyptera microptera, Celes variabilis, Gampsocleis glabra, Locusta migratoria, Oedaleus decorus, and Stenobothrus rubicundulus had previously been found in only a small number of localities in the Czech Republic. We studied localities in the Czech Republic where they had been been previously reported but where their occurences had not been recently confirmed; the last specimens were observed in the 1940, 1960, or 1970s. All these species occurred at Czech localities representing borderline areas for such sub-Mediterranean and mountainous (Carpathian) species. The localities therefore had not offered optimal conditions for these insects, and the suitable biotopes were also scattered and isolated from each other. In most cases, these biotopes had disappeared due to change in management (either to natural or artificial forestation). Although certain of these species are excellent flyers (especially O. decorus), the known recent localities are separated by hundreds of kilometers. Based on our failure to find these species after extensive attempts, we conclude that discussed species should be considered regionally extinct in the Czech Republic. These species are of particularly vulnerable vegetation structures. The loss of these species indicate urgency for assessing status of co-occuring taxa.     

Detection of Mycobacterium avium subsp. paratuberculosis in Retail Cheeses from Greece and the Czech Republic

We investigated the presence of Mycobacterium avium subsp. paratuberculosis in retail cheeses from Greece and the Czech Republic. We found that 31.7% and 3.6% of our samples reacted positive by PCR and culture, respectively. Consumption of these cheeses is likely to result in human exposure to M. avium subsp. paratuberculosis, albeit at a low level for viable cells.     

Benthic macroinvertebrates along the Czech part of the Labe and lower section of the Vltava rivers from 1996–2005, with a particular focus on rare and alien species

In the Czech part of the Labe River and the lower part of the Vltava River, we examined if the benthic macroinvertebrate composition changed from 1996 to 2005 due to expected improvements in water quality resulting from socioeconomic changes in the Czech Republic since the 1990s. Special attention was given to rare and alien species. The four biological metrics used (Number of taxa, BMWP, Number of sensitive taxa, and Number of EPT taxa) demonstrated that there was indeed an improvement in water quality as well as a slight improvement of the Labe microhabitats during the investigated period. An increasing Number of taxa over time was observed at most sites. Two main concurrent ecological processes are recently in progress in the Labe: a recovery of native species and an expansion of alien species, some of which are considered invasive. The caddisfly Setodes punctatus and the beetle Pomatinus substriatus, considered as regionally extinct in the Czech Republic until 2005, were rediscovered during our investigations. Findings of the crustacean Hemimysis anomala (invasive) and the chironomids Stenochironomus sp. and Lipiniella sp. were the first records of these taxa in the Czech Republic.     

Long-term changes in fish community structure in relation to the establishment of Asian carps in a large floodplain river

The Upper Mississippi River System, including the Illinois River, has been invaded by a number of nonnative species including silver carp Hypophthalmichthys molitirx and bighead carp H. nobilis, collectively referred to here as Asian carps. Silver carp densities in the Illinois River have increased dramatically and now represent some of the highest densities of wild silver carp anywhere in the world. Asian carps have the potential to alter existing ecosystems by consuming planktonic resources and therefore, could have the ability to alter existing fish communities as most fishes are dependent on planktonic resources during early development. However, identifying the relationship of fish community structure to the establishment of Asian carps has yet to be thoroughly investigated. Using long-term fish community data collected by the Upper Mississippi River Restoration’s Long Term Resource Monitoring element, we investigate changes in fish community structure pre- and post-establishment of Asian carps. Significant differences in the pre- and post-establishment communities were observed for the majority of gears and habitats. Species contributing to changes between establishment periods included most sportfish species and catostomids, which were less abundant post-establishment of Asian carps, while shortnose gar, grass carp, and emerald shiner were more abundant. While our analyses show Asian carps are likely contributing to major differences in fish community structure, future research and long-term monitoring should investigate the mechanisms and interactions responsible for community changes as well as identifying any potential concurrent or confounding factors such as changes in river hydrology or sedimentation.     

The genetic structure of raccoon introduced in Central Europe reflects multiple invasion pathways

Invasions of non-native species are of great concern as they have a devastating impact on native biodiversity and can also affect the economy of a region. Multiple introductions in several locations of a new range greatly promote the success of non-native species. The raccoon (Procyon lotor) is an omnivore whose native distribution extends from southern Canada to Panama. It has been successfully introduced in many European countries. We examined the microsatellite and mitochondrial diversity of raccoon populations in Central Europe (Germany, Poland, and Czech Republic) in order to determine their introduction sources and pathways as well as the factors affecting genetic structure in this invasive species. We found low diversity of the mtDNA control region and moderate diversity of microsatellite markers. Raccoon showed three hierarchic levels of genetic structure which separate at different levels sampled from Czech Republic, Germany and raccoon inhabiting two different habitats in Poland. In Poland the raccoon population was established through migration from Germany to Czech Republic. Analysis of the intensity of migration between two different habitat types indicated source-sink dynamics in the Polish populations of raccoons. Our results confirm the high intensity of the raccoon invasion in Central Europe and point to specific measures needed as part of an effective management strategy.     

Prevalence of kairomone-induced diapause in Daphnia magna from habitats with and without fish

The prevalence of the diapause response of the freshwater crustacean Daphnia magna to chemical cues on fish predation was evaluated in 35 clones originating from 14 European water bodies—inhabited or not inhabited by fish. Clonal lineages of experimental animals were cultured for 4 weeks in the presence or absence of water to which an extract of faeces of crucian carps (Carassius carassius), that were fed with Daphnia, was added. The proportion of females producing diapausing forms during the experimental period was used as a measure of the diapause response. A positive diapause response to fish predation cues was observed in 43% of investigated clones that originated from 71% of the water bodies tested. This indicated that the diapause response to fish scent is a common phenomenon in Daphnia magna from various locations in Europe. Surprisingly, no signs of a stronger diapause reaction to the tested cues were found in Daphnia originating from water bodies inhabited by fish compared with those from fish-free habitats.     

Disruption of magnetic orientation in hatchling loggerhead sea turtles by pulsed magnetic fields

Loggerhead sea turtles (Caretta caretta) derive both directional and positional information from the Earths magnetic field, but the mechanism underlying magnetic field detection in turtles has not been determined. One hypothesis is that crystals of biogenic, single-domain magnetite provide the physical basis of the magnetic sense. As a first step toward determining if magnetite is involved in sea turtle magnetoreception, hatchling loggerheads were exposed to pulsed magnetic fields (40 mT, 4 ms rise time) capable of altering the magnetic dipole moment of biogenic magnetite crystals. A control group of turtles was treated identically but not exposed to the pulsed fields. Both groups of turtles subsequently oriented toward a light source, implying that the pulsed fields did not disrupt the motivation to swim or the ability to maintain a consistent heading. However, when swimming in darkness under conditions in which turtles normally orient magnetically, control turtles oriented significantly toward the offshore migratory direction while those that were exposed to the magnetic pulses did not. These results are consistent with the hypothesis that at least part of the sea turtle magnetoreception system is based on magnetite. In principle, a magnetite-based magnetoreception system might be involved in detecting directional information, positional information, or both.     

Ontogeny of magnetoreception in chickens (Gallus gallus domesticus)

Chickens are precocial birds, capable of moving independently from within a few hours of hatching, and thus provide a useful model to investigate the development of magnetoreception in young birds. Chicks show some sharply-timed behavioural changes at around 11 days of age that may be indicative of improvements in navigation ability around this age. We trained Young (<10 days, n = 7) and Old (11 days or older, n = 6) chicks to find a hidden imprinting stimulus behind one of four screens in a square arena. Once criterion was reached, the directional choices of chicks were recorded in unrewarded tests in the geomagnetic field and in an experimental field shifted by 90° clockwise. These tests were separated with rewarded training trials to avoid extinction. In the first, and the first 3 tests, no indication was found that chicks chose the correct unimodal magnetic direction. Instead, in all tests, Old chicks preferred the screens in the same magnetic axis as the training direction in tests in the geomagnetic and shifted experimental fields significantly more than Young chicks (P < 0.05). Choices of Young chicks were no different to chance in tests, whereas choices by Old chicks were significantly different from chance (P < 0.05). Our findings support the hypothesis that magnetoreception appears in the second week of life in the chicken. It is, however, unclear when a truly directional magnetic response (i.e. an unimodal, rather than axial, response in our test) develops that could be used by the chicks for accurate navigation.