环境生物技术信息学及其应用

通过介绍环境生物技术及生物信息学的产生发展及应用,概述了环境生物技术信息学的内容与应用前景。     

纤维素酶在工业领域中的应用及研究进展

纤维素酶广泛存在于自然界的生物体中,在食品、酿造行业、农副产品深加工、饲料、医药、环境保护和化工等领域有着非常广阔的应用前景和应用潜力。我国纤维素酶的生产及应用研究近年来取得了很大进展。本文对纤维素酶在工业领域中的应用及研究进展进行了综述。     

水生植物在污水处理和水质改善中的应用

介绍了水生植物在污水治理中的应用。通过与其他方法的比较,说明了水生植物净化法有其独特的优点。分别阐述了低等植物藻类及高等水生植物净化污水的应用类型、方式,应用范围及净化机理,还对高等水生植物的选取标准作了描述。指出了该方法使用的可行性,并对其应用前景作出了展望。     

除草剂及抗除草剂作物的应用现状与展望

除草剂、抗除草剂作物的应用大大提高了农田除草效率,具有巨大的经济效益.介绍除草剂的种类、作用特点及应用现状,阐述现有抗除草剂作物的类型、研究进展及应用概况,分析除草剂及抗除草剂作物种植所产生的直接和间接影响,探讨未来抗除草剂作物的发展趋势与应用展望.     

捷径生物脱氮的研究进展

对捷径生物脱氮的机理、运行条件、实验研究及工业应用作了简单的综述和讨论,并指出了捷径生物脱氮技术的特点及应用前景.     

荒漠生态系统中的先行者——荒漠藻类

由于世界荒漠化日益严重,荒漠藻类的研究与应用受到重视。对荒漠藻类的基础理论研究及应用状况进行了全面的介绍,重点论述了荒漠藻类的群落演替、逆境适应机制和在荒漠化治理中的应用等,并对荒漠藻类今后的研究及应用进行了展望。     

数字化外科技术在颌面部外伤修复重建中的应用与展望

近年来,数字化外科技术在颌面部外伤修复重建临床应用中得到不断发展和完善,极大地提高了手术的精确性和可靠性,节约了手术时间。本文主要从术前手术模拟、快速打印3D头模、术中导航、导板制作、个性化修复体及机器人的临床应用等六个方面来阐述数字化外科技术在颌面部骨折修复重建中的应用,总结了各个技术的原理、优缺点及应用现状,回顾了我们单位应用数字化技术提高颌面部外伤修复手术的精确度和可行性以及恢复了患者良好的面型及功能的临床应用经验。同时,本文对未来数字化外科在颌面部骨折修复重建中的应用提出了新的展望,我们认为,结合术前手术模拟、术中导航及术中机器人技术依据术中具体情况自动调整手术方案进行颌面部骨折修复重建的完全自动化智能机器人的实现将是最终的目标。     

SSR分子标记在烟草研究中的应用进展

SSR分子标记技术作为最常用的分子标记技术之一,该标记技术重复性好,结果可靠,近年来在烟草遗传育种中展示了广阔的应用前景,是应用潜力较大的分子标记技术。介绍了SSR分子标记的原理及其分布特征,对其在烟草基因定位及分子标记辅助选择、种质资源研究、遗传图谱构建及种子纯度及真伪鉴定研究中的应用等方面进行了综述,并探讨了SSR分子标记技术在烟草遗传育种中的应用前景,以期为烟草SSR分子标记技术的研究提供参考。     

荧光原位杂交技术及其在环境微生物生态学中的应用研究

荧光原位杂交技术是一种能够同时对微生物进行定性、定量和研究微生物群落空间分布情况的有力工具。简要介绍了荧光原位杂交技术的方法,并对其在人为创制环境和自然环境中特征性微生物种群及群落生态学中的应用研究进行了讨论,指出了该种技术在应用中存在的问题与缺陷,最后对荧光原位杂交技术在堆肥微生物生态中的应用及与其他方法的组合应用进行了展望。     

典型环境污染物修复基因工程菌的构建及应用

随着人类活动的增加,对有机物和重金属的应用越来越广泛,同时造成的环境污染程度越来越严重.综述了石油、农药、表面活性剂及重金属类污染物治理中基因工程菌的构建及应用的研究进展,指出利用基因工程菌解决环境中的石油、农药、表面活性剂及重金属的污染问题已成为环境污染修复领域的研究热点,并提出基因工程菌的构建及应用过程中的难点及发展趋势.     

Chromosome and DNA damage analysis in individuals occupationally exposed to pesticides with relation to genetic polymorphism for CYP 1A1 gene in Ecuador

DNA damage was measured by using the alkaline comet assay and the chromosomal aberration (CA) test using peripheral blood samples from 45 pesticide sprayers from Cayambe, Ecuador. From a total of approximately 200 nuclei scored for each donor with the comet assay, a highly significant increase in DNA migration was observed when compared with a similar unexposed control population. Additionally, in the CA test, the exposed individuals were found to be significantly different when compared to the control population. Polymorphisms for the CYP 1A1 (Msp I and Ile/Val) in exposed individuals were analyzed by PCR-RFLP and allele-specific PCR techniques. No association was found between the polymorphisms and higher levels of DNA damage as assessed by the comet assay.     

In vitro cytogenetic studies of cypermethrin on human lymphocytes

Assessment of cytotoxicity and response to external factors like pesticides were evaluated by 3-(4,5-dimethylthiazol-2-yl)-2.5-diphenyltetrazolium bromide (MTT) or MTT assay, which measures mitochondrial metabolism in the entire cell culture and provides information about the percentage of cell survival. Utilizing the MTT assay, the cytotoxicity of cypermethrin was determined on lymphocyte cultures from human peripheral blood samples, the short-term lymphocyte cultures were incubated with various aliquots of the cypermethrin and the LC50 was found to be 33.6 microM. Lymphocytes treated with low-doses (1/10 of LC50) of cypermethrin showed an increase in the frequency of chromosomal aberrations and found to be significant. Karyotype analysis revealed more satellite associations and chromosomal breaks in cypermethrin treated samples. Low-doses of the pesticide also induced single-strand breaks in the DNA as assessed by comet assay. The pesticide caused increase in the comet tail length with increase in pesticide concentration, implicating genotoxicity in somatic cells. It is concluded that In vitro assays could give important information of the mechanism of toxicity at low dosages and impact on genetic material of human origin.     

Evaluation of DNA damage in workers occupationally exposed to pesticides using single-cell gel electrophoresis (SCGE) assay. Pesticide genotoxicity revealed by comet assay

The comet assay, also called the single-cell gel electrophoresis (SCGE) assay, is a rapid and sensitive method for the detection of DNA damage (strand breaks and alkali-labile sites) in individual cells. The assay is based on the embedding of cells in agarose, their lysis in alkaline buffer and finally subjection to an electric current. In the present study, alkaline SCGE was used to evaluate the extent of primary DNA damage and DNA repair in peripheral blood lymphocytes of workers employed in pesticide production. After the period of high pesticide exposure, lymphocytes of the occupationally exposed workers manifested increased tail length and tail moment compared to the control group. After the workers spent 6 months out of the pesticide exposure zone, both endpoints were still above that of the control but significantly decreased as compared to the results of the first analysis.     

Genotoxicity of three pesticides used in Costa Rican banana plantations

The in vitro genotoxicity of imazalil and thiabendazole fungicides and the insecticide chlorpyrifos, compounds used in Costa Rican banana plantations, was evaluated with the single-cell gel electrophoresis technique (comet assay). The comet assay is a simple, rapid and low cost technique for quantification of DNA damage. This assay detects DNA single-strand breaks and alkali-labile sites in individual cells. The effects were analyzed by using human lymphocytes exposed to doses of 0, 25, 50, 75 and 100 microg/ml of each pesticide for 30 min at 37 degrees C. The cells were embedded in agarose, lysed, subjected to alkaline electrophoresis (pH >13) for 20 min at 25V, neutralized and dehydrated to be stained with a fluorescent dye and later comets visualization with the epifluorescence microscope. Chlorpyrifos and imazalil induced significant DNA damage in a dose-dependent manner. Chlorpyrifos was the major inductor of DNA breaks. These results indicate that both are genotoxic compounds in vitro. Thiabendazole fungicide did not induced DNA damage using the comet assay for all concentrations tested.     

Application of Comet Assay in Plant Protoplast Apoptosis Detection

The authors report the application of neutral comet assay in the detection of apoptosis in tobacco (Nicotiana tabacum L. ) pretoplasts. The results suggested a close inter-relationship between comet formation and nuclear compacting into densed masses at the nuclear periphery (a typical morphological symptom of apoptosis). Standard detection of hallmarks of apoptosis, including DNA laddering and TdT-mediated biotin-dUTP nick end-Lase Labeling (TUNEL), was also performed in order to conform the reliability of comet assay in the detection of apoptosis in plant protoplasts.     

彗星电泳法在植物原生质体凋亡检测中的应用

应用中性法彗星电泳检测烟草（ＮｉｃｏｔｉａｎａｔａｂａｃｕｍＬ．）原生质体的凋亡。结果表明,彗星发生的百分率（彗星率）和发生核质固缩及“核着边”（凋亡形态学标志）的细胞的百分率之间存在明确的相关性。利用标准的细胞凋亡检测手段,包括ＤＮＡｌａｄｄｅｒｉｎｇ及核糖核酸末端转移酶介导的ｂｉｏｔｉｎｄＵＴＰ缺口末端标记（ＴＵＮＥＬ）,都证明这种彗星电泳法可以用来比较精确地检测植物原生质体的凋亡。     

In vivo genotoxicity of the pyrethroid pesticide beta-cyfluthrin using the comet assay in the fish Bryconamericus iheringii

Environmental pollution by pesticide residues is a major environmental concern due to the extensive use of these substances in agriculture. The insecticide beta-cyfluthrin is a synthetic pyrethroid widely used in agricultural and other domestic activities. The aim of the present study was to assess the genotoxic effects of a sublethal exposure of the fish Bryconamericus iheringii (Characidae) to a commercial formulation of beta-cyfluthrin using the comet assay. Fish were exposed to sublethal concentrations (4.2 and 5.6 microg/L) of beta-cyfluthrin under static conditions during 24- and 48-h exposure periods. Fish in tap water were used as negative controls. Results obtained by the comet assay revealed genotoxic effects of the pyrethroid in the higher concentration and at the longer exposure period. The mean DNA damage index of fish exposed to 5.6 microg/L beta-cyfluthrin for 48 h was significantly higher (145.9 +/- 51.8) than in the control group (69.3 +/- 39.5). These findings indicate that native fish species might be at risk for genotoxic damage in waters contaminated with beta-cyfluthrin.     

Comet assay: rapid processing of multiple samples

The present study describes modifications to the basic comet protocol that increase productivity and efficiency without sacrificing assay reliability. A simple technique is described for rapidly preparing up to 96 comet assay samples simultaneously. The sample preparation technique allows thin layers of agarose-embedded cells to be prepared in multiple wells attached to a flexible film of Gelbond, which improves the ease of manipulating and processing samples. To evaluate the effect of these modifications on assay sensitivity, dose-response curves are presented for DNA damage induced by exposure of TK6 cells to low concentrations of hydrogen peroxide (0-10 microM) and for exposure of human lymphocytes to X-irradiation (0-100 cGy). The limit of detection of DNA damage induced by hydrogen peroxide in TK6 cells was observed to be 1 uM for all parameters (tail ratio, tail moment, tail length and comet length) while the limit of detection of DNA damage in human lymphocytes was 10 cGy for tail and comet length parameters, but 50 cGy for tail ratio and tail moment parameters. These results are similar to those previously reported using the conventional alkaline comet assay. The application of SYBR Gold for detection of DNA damage was compared to that of propidium iodide. Measurements of matching samples for tail length and comet length were similar using both stains. However, comets stained with SYBR Gold persisted longer and were much brighter than those obtained with propidium iodide. SYBR Gold was found to be ideal for measuring tail length and comet length but, under present assay conditions, impractical for measuring tail ratio or tail moment due to saturation of staining in the head region of the comets.     

Detection of DNA damage in haemocytes of zebra mussel using comet assay

The aim of the study was to use the comet assay on haemocytes of freshwater mussel, Dreissena polymorpha Pallas, for detection of possible DNA damage after exposure to pentachlorophenol (PCP) and to evaluate the potential application of the comet assay on mussel haemocytes for genotoxicity monitoring of freshwater environment. Zebra mussels were exposed for seven days to different concentrations (10, 80, 100, 150 microg/l) of PCP and in the river Sava downstream from Zagreb municipal wastewater outlet. Significant increase in DNA damage was observed after exposure to PCP at doses of 80 microg/l and higher and after in situ exposure in the river Sava as well. This study confirmed that the comet assay applied on zebra mussel haemocytes may be a useful tool in determining the potential genotoxicity of water pollutants.     

Detection of DNA damage in haemocytes of zebra mussel using comet assay

The aim of the study was to use the comet assay on haemocytes of freshwater mussel, Dreissena polymorpha Pallas, for detection of possible DNA damage after exposure to pentachlorophenol (PCP) and to evaluate the potential application of the comet assay on mussel haemocytes for genotoxicity monitoring of freshwater environment. Zebra mussels were exposed for seven days to different concentrations (10, 80, 100, 150 μg/l) of PCP and in the river Sava downstream from Zagreb municipal wastewater outlet. Significant increase in DNA damage was observed after exposure to PCP at doses of 80 μg/l and higher and after in situ exposure in the river Sava as well. This study confirmed that the comet assay applied on zebra mussel haemocytes may be a useful tool in determining the potential genotoxicity of water pollutants.