不同类型莲资源的RAPD聚类分析

利用17个随机引物对32份莲属(Nelumbo)品种资源进行RA PD分析.扩增形成207条谱带,其中多态带193条,占93.23%,显示该属植物在我国具有丰富的遗传多样性.结果还表明:(1)莲属种质资源可分为3个品种群:花莲、子莲和藕莲,与传统的园艺学分类相吻合.(2)美洲黄莲与中国莲的花莲之间在DNA水平上差异不大,遗传背景与花莲更相似.(3)藕莲、子莲和花莲可能由不同遗传背景的野莲演化而来.     

莲的绒毡层和花粉发育的细胞学观察

莲的绒毡层和花粉发育的细胞学观察陈祖铿，唐佩华，张和民，刘一鸣，张锦晖，周馥（中国科学院植物研究所，北京１０００４４）莲（Ｎｅｌｕｍｂｏｎｕｃｉｆｅｒａ）属睡莲科植物，睡莲目类群的最基本特征是原生无导管同型木质部，并趋向水生生活方式。因此，在探讨植物...     

睡莲科的系统发育:核糖体DNA ITS区序列证据

以金鱼藻Ceratophyllum demersum为外类群,使用PAUP4.0b4A软件对睡莲科Nymphaeaceae植物7属11个代表种的ITS区序列进行了系统发育分析。采用最大简约法分析获得了3个最简约树,步长为1125,一致性指数(CI)和维持性指数(RI)值分别为0.7618和0.7214。利用3个最简约树获取严格一致树。结果表明:(1)莲属Nelumbo位于系统树的基部,自展支持率为100%,可从睡莲科中独立出来成立莲科Nelumbonaceae和莲目Nelumbonales;(2)萍蓬草属Nuphar是一单系类群,位于分支Ⅱ的基部,并和睡莲科其他属(不包括莲属)植物聚在一起构成姐妹群,故萍蓬草属仍应置于睡莲科中;(3)水盾草属Cabomba和莼菜属Brasenia聚成一小支并构成姐妹群,自展支持率为99%,说明这两属之间亲缘关系较近;(4)睡莲属和芡实属Euryale、王莲属Victoria聚成一小支并构成姐妹群,自展支持率为94%,说明三者亲缘关系较近,仍应置于睡莲科中。     

孑遗和长寿命植物——莲

<正>莲(也称荷花)隶属莲科(Nelumbonaceae)莲属(Nelumbo),是被子植物家庭中起源较早的类群之一。最早化石出现在早白垩纪,第三纪时广布于北半球的众多湿地,共有5个化石属(Nelumbites、Paleonelumbo、Nelumbago、Exnelumbites和Nelumbo),约30个化石种。经过第四纪冰期后,仅现存一个莲属(Nelumbo),莲(N.nucifera Gaertn.)和美洲黄莲(N.lutea Willd.)2个种。莲分布于亚洲和澳大利亚北部,美洲黄莲分布于北美洲,二者被太平     

莲品种DNA指纹图谱的构建

为了克服单纯依据形态特性鉴定品种的局限性, 我们开展了莲品种DNA指纹图谱构建研究, 旨在对其品种的快速准确鉴定及专利权保护等起一定作用。本研究以圆明园保存的72个莲品种为实验材料, 用来自不同地点的1,409份野生莲(Nelumbo nucifera)和58份美洲黄莲(N. lutea)群体样本作遗传背景参照。从104对核微卫星引物(nSSR)中筛选出15对, 从17对叶绿体微卫星(cpSSR)引物中筛选出2对, 共17对引物作为72个莲品种DNA指纹鉴定的条码。15对nSSR引物共检测到94个等位基因(平均6.27个), 其中11个属于美洲黄莲, 65个属于野生莲, 18个不能区分; 多态信息含量(PIC)介于0.3899-0.8023之间 (平均0.5748)。2对cpSSR引物共检测到13个单倍型, 其中9个属于野生莲, 4个属于美洲黄莲。全部17对引物标记结果显示, 共有19个品种含有美洲黄莲遗传组分, 其中8个母系来源于美洲黄莲; 有36个品种(涉及12对引物)具有至少1个特有基因型; 最少8对引物组合可完全区分开68个品种。有2组共4个品种组内全部17对引物均不能区分。本研究通过核心引物组合法使68个莲品种获得特异性DNA指纹。推荐13对nSSR和2对cpSSR共15对引物作为莲品种鉴定的核心条码, 并建议将形态特征与DNA指纹相结合作为莲品种的鉴定标准。     

基于EST-SSR标记的莲属种质资源遗传多样性分析

利用EST-SSR分子标记对30个亚洲莲、6个美洲莲及14个亚美杂交莲品种(野生居群)进行遗传多样性分析,结果表明:从123对EST-SSR引物中筛选出52对(42.3%)扩增稳定、具有多态性的引物;利用这52对引物对50个不同类型代表的莲属品种进行扩增,共获得177条多态性条带,引物的等位基因数和多态性信息量(PIC)的范围分别为2~8个和0.63(NNFB-1059)-0.91(NNFB-750),平均为3.4个和0.79。利用NTSYS-pc2.11软件对扩增结果进行Jaccard相似性系数分析,50个荷花品种材料遗传相似系数为0.24~0.86;通过UPGMA法进行聚类分析,在遗传相似系数0.37处供试荷花材料可分为4大类群:亚洲莲品种均聚类在I、II类群中,III类群绝大部分为亚美杂交莲品种,IV类群为美洲莲,亚美杂交莲品种与亚洲莲品种的亲缘关系相对较近,与传统分类及前人研究结果相一致。     

睡莲目的数量分支分类学研究

本文应用数量分支分类学的Farris-Wagner方法,研究了睡莲目10个已知属的系统发育关系。结果表明,唾莲目可分为3个科:莲科、睡莲科和金鱼藻科。本文还讨论了数量分支分析在植物分类学中的应用问题。     

花莲种质资源的遗传多样性及品种间亲缘关系的探讨

利用17个随机引物对来自中国和美国的29份花莲种质资源材料进行了RAPD分析。扩增形成207条谱带,多态带122条,多态率为58．94％。说明中国花莲具有较丰富的遗传多样性。结果还显示：（1）花莲种质资源可被分为2个品种群：品种群Ⅰ以大花型为主,少量小花型。品种群Ⅰ以中小型花为主。又在欧氏遗传距离11．01处分为7个亚品种群。（2）美洲黄莲与中国莲的花莲之间在DNA水平上没有显著差异,与中小型花关系更近。     

抗风桐(Pisonia grandis)的生态生物学特征

对收集于广西桂林的17份野生毛葡萄种质和24份栽培葡萄种质,分别使用12条ISSR和12条SCoT引物进行了遗传多样性和亲缘关系检测。结果表明：两种分子标记均能产生较丰富的多态性片段,可有效应用于葡萄的遗传多样性检测,但在聚类分析结果上表现出一定的差异性,SCoT分子标记能更好地区分野生种质和栽培品种,说明SCoT分子标记在葡萄遗传多样性检测和系统进化研究上可能更有优势。从SCoT聚类结果上看,广西植物研究所收集的3个野生毛葡萄种质zws1、zws2和zws3相对其它野生种质而言,更偏向于与栽培种质聚为一类,说明这一类野生毛葡萄可能是这些栽培品种的原始亲本来源之一。不同的野生种质聚为多个类群,并表现出明显的地域特性,但遗传距离相对较远,说明桂林野生毛葡萄资源具有丰富的遗传变异。栽培品种没有明显的聚类特点,可能因为所选用的栽培品种的地域代表性并不是很强,也可能是因为栽培品种在不断的人工杂交选育过程中,遗传背景趋向一致,遗传多样性降低。该研究证明SCoT分子标记在葡萄遗传多样性研究上具有一定的优势。该研究结果为桂林毛葡萄资源的保护、利用和品种选育提供了理论依据,也为葡萄的系统进化研究提供了参考。     

基于SSR标记的荷花品种遗传多样性及群体结构分析

采用SSR标记技术对42个荷花品种( Nelumbo spp.)的基因组DNA进行扩增,在此基础上,对供试品种进行UPGMA聚类分析、群体结构分析和主坐标分析( PCoA)。结果表明：采用17对SSR引物从42个荷花品种的基因组DNA中扩增出77个位点,多态性位点百分率为88.31%;每对引物可扩增出1~9个多态性位点。根据Nei's遗传距离,供试的42个荷花品种可被分成Ⅰ和Ⅱ两组,分别包含3和39个品种;在Nei's遗传距离0.150处,Ⅱ组被进一步分成Ⅱa、Ⅱb和Ⅱc 3个亚组,分别包含3、16和20个品种。群体结构分析结果表明：组分概率高于等于0.80时,供试的42个荷花品种被分成Pop1、Pop2和混合群3个亚群,分别包含17、16和9个品种。 PCoA分析结果表明：在F1水平上,供试的42个荷花品种被分成2个部分;其中,Pop1亚群的品种均分布在第二和第三象限,而Pop2亚群的品种则分布在第一和第四象限。总体来看,聚类分析、群体结构分析和PCoA分析的结果基本一致。综合分析结果表明：玉组包含美洲黄莲( N. lutea Pers.)品种‘艾江南',且与传统中国莲( N. nucifera Gaertn.)品种的亲缘关系最远,故认为该组为美洲黄莲;Ⅱ组为中国莲,其中,Ⅱc亚组以传统中国莲品种为主,而Ⅱb亚组则偏重于美洲黄莲。总体上看,供试的42个荷花品种主要被分为中国莲和美洲黄莲两组,而中美杂交莲并没有独立成组,其成因有待进一步研究。     

莲子食用价值研究进展

莲（Nelumbo nucifera Gaertn.）为莲科莲属多年生水生双子叶被子植物,在世界上具有广泛的分布。莲的用途广泛,其各个组织器官都可以食用或药用。莲的种子即莲子是一种广受欢迎的食物,既可鲜食也可加工成各种莲子产品后食用。莲子中含有丰富的淀粉、蛋白质、多糖、氨基酸、矿质元素、酚类、生物碱等成分,既能食用,也具有保健价值。前人对莲子的生长发育及营养价值已经开展了较多的研究,在此基础上,该文主要针对莲子的营养成分、保健功效和加工工艺进行综述,并对莲子的开发应用前景和限制因素进行总结和展望。     

Polymorphic chloroplast microsatellite loci in Nelumbo (Nelumbonaceae)

? Premise of the study: To study population genetics, phylogeography, and hybridization of Nelumbo (Nelumbonaceae), chloroplast microsatellite markers were developed. ? Methods and Results: Seventeen microsatellite loci were identified from the chloroplast genomes of N. nucifera and N. lutea. Polymorphisms were assessed in three populations of N. nucifera and one population of N. lutea. Nine loci were found to be polymorphic in N. nucifera, and all 17 loci were found to be polymorphic in N. lutea. In N. nucifera, the number of alleles per locus ranged from two to six, and the unbiased haploid diversity per locus ranged from 0.198 to 0.790. In N. lutea, the number of alleles ranged from two to four, and the unbiased haploid diversity per locus ranged from 0.245 to 0.694. ? Conclusions: The identified chloroplast simple sequence repeat markers will be useful for the study of genetic diversity, phylogeography, and identification of Nelumbo cultivars.     

ISSR analysis of genetic diversity in sacred lotus cultivars

In this study, inter-simple sequence repeats (ISSR) markers were applied to assess genetic diversity and genetic relationships of 92 cultivars of sacred lotus (Nelumbo nucifera Gaertn.), one of the most famous flowers in China. Our results showed that sacred lotus exhibited a low level of genetic diversity (percentage of polymorphic bands, PPB = 55.8%), which may result from its asexual mode of reproduction and long-term artificial selection. Clustering analyses indicated that these cultivars could be divided into two clades. Most cultivars of Chinese lotus species origin were included in one clade, and one cultivar of American lotus species origin was nested in the other clade. The hybrid cultivars from hybridization between the two subspecies were interspersed in these two clades. Seven cultivars native to Thailand formed a distinct subclade among the cultivars of Chinese lotus species origin. Genetic differentiation between two subspecies, and between cultivars from Thailand and other cultivars could be attributed to geographic isolation. The monophyly of three cultivars of Sanshui Winter Lotus and their closest relationships to Chinese lotus species origin suggests that they might have a common origin and may consist completely or mainly of genetic material from N. nucifera subsp. nucifera.     

不同荷花品种出泥部分与根状茎生长性状和部分生理指标的比较及相关性分析

在盆栽条件下,对不同荷花(Nelumbo nucifera Gaertn.)品种〔藕莲品种'大紫红'('Dazihong')、花莲品种'中国红·上海'('Zhongguohongshanghai')和花藕兼用莲品种'逸仙莲'('Yixianlian')〕出泥部分(叶和花)和泥下部分(根状茎)的生长性状和部分生理指标进行了比较研究,并对3个荷花品种出泥部分与根状茎间的生长性状和部分生理指标进行了相关性分析.结果表明:'大紫红'在整个生长发育期不开花;'中国红·上海'开花时间相对较早(6月上旬),花重瓣且色泽鲜艳;'逸仙莲'开花时间相对较晚(7月上中旬),花单瓣呈白色.3个荷花品种中,'大紫红'立叶数最少,立叶面积最大,根状茎膨大明显,根状茎中可溶性糖和可溶性蛋白质含量最高;'中国红·上海'立叶数最多,立叶中叶绿素含量最高,根状茎节间长度最长,但根状茎膨大不明显;'逸仙莲'立叶数居中,叶柄最长,根状茎膨大明显,根状茎中可溶性蛋白质、可溶性糖、淀粉和维生素C含量介于其他2个荷花品种之间.相关性分析结果表明:荷花立叶面积与根状茎节间长度呈显著负相关,而与根状茎中可溶性糖、可溶性蛋白质及维生素C含量呈极显著或显著正相关;叶柄长度与根状茎直径和根状茎节间质量呈显著正相关;立叶中叶绿素含量与根状茎节间长度和根状茎中淀粉含量呈显著正相关,而与根状茎中可溶性糖含量呈显著负相关.研究结果显示:根据供试3个荷花品种的立叶面积、叶柄长度、立叶中叶绿素含量可间接判断根状茎的生长发育及营养品质状况,并可进一步应用于快速选育花藕兼用莲品种.     

荷花花蕾cDNA文库构建及质量评价

为理解荷花Nelumbo nucifera花器官转录组表达情况,分别选取不同花型的代表品种‘洪湖红莲’Nelumbo nucifera ‘Honghu Honglian’(单瓣)、‘唐招提寺莲’N. nucifera ‘Tangzhaotisi Lian’(重瓣)和‘千瓣莲’N. nucifera ‘Qianban Lian’(千瓣及全重瓣)的花蕾为材料分离mRNA,利用SMART技术合成双链cDNA,经限制性内切酶SfiI酶切后回收去掉接头和500 bp以下片段的cDNA。将cDNA与pUC19载体连接,构建荷花花蕾cDNA文库。经检测,该文库容量为1.12 × 106 pfu·mL-1,插入片段大小集中在500～2000 bp,重组率为95%。该文库的成功构建为荷花花蕾期转录组数据的开发及其花器官发育相关基因的功能研究奠定了分子基础。     

RAPD Analysis of Germplasm in Ancient

By using 40 random primers and 8 anchor-SSR primers, RAPD and microsatellite DNA (SSR) polymorphism were detected in the ancient "Taizi lotus" and the modem Chinese red flower lotus (Nelumbo nucifera Gaertn. ) from Hebei, Harbin (wild population), Jiangxi and Hunan (cultivar). The polymorphism information could be provided with 13 random primers and 2 SSR primers. Total 135 loci were amplified, 71 loci of these were polymorphic (53%). Agarose electrophoresis showed high genetic identity without any genetic variation whithin "Taizi" and Harbin lotus by using the above-mentioned 15 primers. However, there were different extent of differentiation within Hebei, Jiangxi and Hunan lotus. According to the UPGMA analysis of MEGA program, "Taizi", Harbin and Hebei lotus were gathered to a branch in the dendrogram. The genetic distance of "Taizi" and Hebei lotus were very close (0.05). They shared a common ancestry. Comparing with the modem Chinese lotus ( N. nucifera ), the ancient "Taizi" lotus only lacked one locusOPM06-300, so it still belonged to N. nucifera. Hunan and Jiangxi lotus were close to gather and could be grouped in another branch. Their genetic distances from the ancient "Taizi" lotus were farthest (0.67).     

Genetic Diversity Analysis of Nelumbo Accessions Based on EST SSR Markers

EST-SSR markers were applied to estimate the genetic diversity for 30 accessions of Nelumbo nucifera, 6 accessions of Nelumbo lutea and 14 hybrids between these two species. The 52 of 123 EST SSR markers (423%) were screened and then applied to amplify the 50 Nelumbo accessions. A total of 177 alleles were identified, and the number of alleles per locus and Polymorphic Information Content (PIC) value varied from 2 to 8 with an average of 34 alleles and from 063 (NNFB 1059) to 091 (NNFB 750) with an average value of 079, respectively. Jaccard similarity coefficients of the amplification results were analyzed by NTSYS pc2.11 software and the genetic similarity coefficient was from 024 to 086. The clustering dendrogram constructed by UPGMA method indicated that 50 accessions of Nelumbo could be divided into four major groups at the similarity coefficient of 037. Group I and group II included Nnucifera; group III included the majority of Asian American lotus hybrids; and group IV included Nlutea. In addition, the Asian American hybrids were closer to Nnucifera based on genetic relationship, which is consistent with the traditional classification result and the previous reports.     

Nelumbonaceae:Systematic position and species diversification revealed by the complete chloroplast genome

<正>Nelumbonaceae is a morphologically unique family of angiosperms and was traditionally placed in Nymphaeales;more recently,it was placed in Proteales based on molecular data,or in an order of its own,Nelumbonales. To determine the systematic position of the family and to date the divergence time of the family and the divergence time of its two intercontinentally disjunct species,we sequenced the entire chloroplast genome of Nelumbo lutea and most of the chloroplast genes of,N.nucifera.We carried out phylogenetic and molecular dating analyses of the two species and representatives of 47 other plant families,representing the major lineages of angiosperms, using 83 plastid genes.The N.lutea genome was 163 510 bp long,with a total of 130 coding genes and an overall GC content of 38%.No significant structural differences among the genomes of N.lutea,Nymphaea alba, and Platanus occidentalis were observed.The phylogenetic relationships based on the 83 plastid genes revealed a close relationship between Nelumbonaceae and Platanaceae.The divergence times were estimated to be 109 Ma between the two families and 1.5 Ma between the two Nelumbo species.The estimated time was only slightly longer than the age of known Nelumbo fossils,suggesting morphological stasis within Nelumbonaceae.We conclude that Nelumbonaceae holds a position in or close to Proteales.We further conclude that the two species of Nelumbo diverged recently from a common ancestor and do not represent ancient relicts on different continents.     

莲子长寿机制的研究进展

莲（Nelumbo nucifera Gaertn.）为莲科、莲属多年水生宿根草本植物。莲子生命力极强,在自然条件下的泥碳层中能存活千年,甚至在极端高温、高湿条件下仍能保持较高的萌发活力。随着莲基因组测序与基因注释的完善,莲子长寿机制的相关研究取得了一定进展。本文对莲子的结构形态、保护系统和基因组特性方面的研究进展进行了综述,阐明莲子的长寿机制,对后续研究方向进行了展望。