Nitrogen deposition effects on soil organic matter chemistry are linked to variation in enzymes,ecosystems and size fractions

Recent research has dramatically advanced our understanding of soil organic matter chemistry and the role of N in some organic matter transformations, but the effects of N deposition on soil C dynamics remain difficult to anticipate. We examined soil organic matter chemistry and enzyme kinetics in three size fractions (>250 μm, 63–250 μm, and <63 μm) following 6 years of simulated atmospheric N deposition in two ecosystems with contrasting litter biochemistry (sugar maple, Acer saccharum—basswood, Tilia americana and black oak, Quercus velutina—white oak, Q. alba). Ambient and simulated (80-kg NO₃ ⁻–N ha⁻¹ year⁻¹) atmospheric N deposition were studied in three replicate stands in each ecosystem. We found striking, ecosystem-specific effects of N deposition on soil organic matter chemistry using pyrolysis gas chromatography/mass spectrometry. First, furfural, the dominant pyrolysis product of polysaccharides, was significantly decreased by simulated N deposition in the sugar maple–basswood ecosystem (15.9 vs. 5.0%) but was increased by N deposition in the black oak–white oak ecosystem (8.8 vs. 24.0%). Second, simulated atmospheric N deposition increased the ratio of total lignin derivatives to total polysaccharides in the >250 μm fraction of the sugar maple–basswood ecosystem from 0.9 to 3.3 but there were no changes in other size classes or in the black oak–white oak ecosystem. Third, simulated N deposition increased the ratio of lignin derivatives to N-bearing compounds in the 63–250 and >250 μm fractions in both ecosystems but not in the <63 μm fraction. Relationships between enzyme kinetics and organic matter chemistry were strongest in the particulate fractions (>63 μm) where there were multiple correlations between oxidative enzyme activities and concentrations of lignin derivatives and between glycanolytic enzyme activities and concentrations of carbohydrates. Within silt-clay fractions (<63 μm), these enzyme-substrate correlations were attenuated by interactions with particle surfaces. Our results demonstrate that variation in enzyme activity resulting from atmospheric N deposition is directly linked to changes in soil organic matter chemistry, particularly those that occur within coarse soil size fractions. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Effects of forest management intensity on carbon and nitrogen content in different soil size fractions of a North Florida Spodosol

Pine plantations of the southeastern USA are regional carbon (C) sinks. In spite of large increases in woody biomass due to advanced growing systems, studies have shown little or even negative effects on the C content of the extremely sandy soils of this region. Hence, it is important to understand the mechanisms that determine the impact of intensive forest management on soil organic carbon (SOC) sequestration. This study was conducted to examine the C profile in a 4-year-old loblolly pine (Pinus taeda L.) plantation managed under two levels of management intensity (chemical understory control and fertilizer inputs). Soil organic C and nitrogen (N) pools were evaluated using two size fractionation methods, dry and wet sieving (2000–250 μm, 250–150 μm, 150–53 μm and <53 μm). Dry sieving was preferred over wet sieving for soil size fractionation, as it preserved more structure and water-soluble SOC components such as esters and amides and did not affect the N distribution. Diffuse Reflectance Infrared Fourier Transform Spectroscopy (DRIFTS) spectra were used to examine the chemical composition of the size fractions, which showed the presence of recently added organic matter in the largest sand fraction, as well as more decomposed organic matter in the <53 μm fraction. Intensive forest management reduced SOC in all three 2000–53 μm fractions, most likely due to reduced root input of understory plants that were controlled using herbicides. The 2000–250 μm fractions contained nearly half of the total SOC and showed a 23% decrease in C content due to the intensive management regime. Results from this study indicated the significance and responsiveness of sand size SOC fractions in Florida Spodosols. Results also showed that reductions in SOC due to intensive management occurred after four years and highlighted the need to understand the long-term impacts and the mechanisms responsible. Responsible Editor: Barbara Wick     

Effects of forest conversion into grassland on soil aggregate structure and carbon storage in Panama: evidence from soil carbon fractionation and stable isotopes

Land-use and land-cover strongly influence soil properties such as the amount of soil organic carbon (SOC), aggregate structure and SOC turnover processes. We studied the effects of a vegetation shift from forest to grassland 90 years ago in soils derived from andesite material on Barro Colorado Island (BCI), Panama. We quantified the amount of carbon (C) and nitrogen (N) and determined the turnover of C in bulk soil, water stable aggregates (WSA) of different size classes (<53 μm, 53–250 μm, 250–2000 μm and 2000–8000 μm) and density fractions (free light fraction, intra-aggregate particulate organic matter and mineral associated soil organic C). Total SOC stocks (0–50 cm) under forest (84 Mg C ha⁻¹) and grassland (64 Mg C ha⁻¹) did not differ significantly. Our results revealed that vegetation type did not have an effect on aggregate structure and stability. The investigated soils at BCI did not show higher C and N concentrations in larger aggregates, indicating that organic material is not the major binding agent in these soils to form aggregates. Based on δ¹³C values and treating bulk soil as a single, homogenous C pool we estimated a mean residence time (MRT) of 69 years for the surface layer (0–5 cm). The MRT varied among the different SOC fractions and among depth. In 0–5 cm, MRT of intra-aggregate particulate organic matter (iPOM) was 29 years; whereas mineral associated soil organic C (mSOC) had a MRT of 124 years. These soils have substantial resilience to C and N losses because the >90% of C and N is associated with mSOC, which has a comparatively long MRT.     

Contribution of trees to carbon storage in soils of silvopastoral systems in Florida, USA

Silvopastoral systems that integrate trees in pasture production systems are likely to enhance soil carbon (C) storage in lower soil layers due to the presence of deep tree roots. To quantify the relative soil C contribution from trees (C3 plants) and warm season grasses (C4 plants) in silvopastoral systems, soil samples were collected and analyzed from silvopastures of slash pine ( Pinus elliottii )+bahiagrass ( Paspalum notatum ), and adjacent open pasture (OP), at six depths down to 125 cm, at four sites representing two major soil orders (Spodosols and Ultisols) of Florida. The plant sources of C in whole (nonfractionated) and three soil fraction sizes (250–2000, 53–250, and <53 μm) were traced using stable C isotope signatures. The silvopasture sites contained higher amounts of C3-derived soil organic carbon (SOC) compared with OP sites, at all soil depths. Slash pine trees (C3 plants) seemed to have contributed more C in the silt+clay-sized (<53 μm) fractions than bahiagrass (C4 plants), particularly deeper in the soil profile. Spodosols sites contained more C in the <53 μm fraction at and below the spodic horizon (occurring between 15 and 50 cm) in silvopasture compared with OP. The results indicate that most of SOC in deeper soil profiles and the relatively stable <53 μm C fraction were derived from tree components (C3 plants) in all the sites, suggesting that the tree-based pasture system has greater potential to store more stable C in the soil compared with the treeless system.     

Effects of grazing intensity on soil carbon stocks following deforestation of a Hawaiian dry tropical forest

The effects of forest-to-pasture conversion on soil carbon (C) stocks depend on a combination of climatic and management factors, but factors that relate to grazing intensity are perhaps the least understood. To understand the long-term impact of grazing in converted pastures, methods are needed that accurately measure the impact of grazing on recent plant inputs to soil C in a variety of pasture management and climate settings. Here, we present an analysis from Hawai'i of changes in vegetation structure and soil organic carbon (SOC) along gradients of grazing intensity and elevation in pastures converted from dry tropical forest 100 years ago. We used hyperspectral remote sensing of photosynthetic vegetation, nonphotosynthetic vegetation (NPV) and exposed substrate to understand the effects of grazing on plant litter cover, thus, estimating recent plant inputs to soils (the NPV component). Forest-to-pasture conversion caused a shift from C3 to C4 plant physiology, thus the δ ¹³C method was used in soil cores to measure the fraction of SOC accumulated from pasture vegetation sources following land conversion. SOC decreased in pasture by 5–9 kg C m⁻², depending upon grazing intensity. SOC derived from C3 (forest) sources was constant across the grazing gradient, indicating that the observed variation in SOC was attributable to changes in C inputs following deforestation. Soil C stocks were also reduced in pastures relative to forest soils. We found that long-term grazing lowers SOC following Hawaiian forest-to-pasture conversion, and that these changes are larger in magnitude that those occurring with elevation (climate). Further we demonstrate a relationship between remotely sensed measurements of surface litter and field SOC measurements, allowing for regional analysis of pasture condition and C storage where limited field data are available.     

Decomposition and transfer of plant residue 14C between size and density fractions in soil

The aim of our study was to follow the transfer of ¹⁴C-labeled ryegrass between size and density fractions of soil organic matter in a sandy and a loam soil. Our hypotheses were a) that the applied ¹⁴C would be transferred from light and soluble fractions to intermediate and heavy macroorganic matter fractions (>150 m) and finally become stabilized in microaggregates (<150 m), and b) that the physical protection of ¹⁴C associated with microaggregates against decomposition would decrease with increasing saturation of the microaggregates with soil organic matter. Generally, the hypotheses were confirmed. Immediately after application most of the label was present in the soluble and light macroorganic matter fractions. Newly synthesized microbial biomass fed on the labeled components of the fractions. The amounts of ¹⁴C in the soluble and light macroorganic matter fractions decreased rapidly, while the amounts of ¹⁴C in the intermediate and heavy macroorganic matter fractions and in microaggregates remained more or less stable. At the end of the incubation most of the residual soil ¹⁴C was found in the microaggregates. In the sandy soil ¹⁴C was concentrated in the 20–150 m fraction, whereas in the loam a larger proportion was present in the <20 m fraction.The mineralization rates of ¹⁴C-labeled material were similar in the light intermediate and heavy fractions of macroorganic matter and in the microaggregates 0 and 180 days after the application of ¹⁴C-labeled ryegrass. In all fractions, ¹⁴C mineralized more rapidly than total C. The results indicate that considerable amounts of ¹⁴C must have transferred from the soluble and light macroorganic matter fractions and newly synthesized microbial biomass to the intermediate and heavy macroorganic matter fractions and the microaggregates, and that ¹⁴C was not yet physically protected against microbial degradation during the whole incubation period. The degree of physical protection of ¹⁴C against decomposition in the microaggregate fraction <20 m was negatively correlated with the degree of saturation of this particle size fraction with soil organic matter.     

Soil macroaggregate dynamics in a mountain spatial climate gradient

We investigated the response of soil macroaggregate dynamics to soil temperature modification along a spatial gradient located on a forested north-facing slope in the southern French Alps, simulating long-term adjustment of soil–plant interactions to absence or occurrence of soil frost. Soil macroaggregate (>250 μm) content of Ah horizons was strongly depleted (72%) in colder plots affected by freeze-thaw events, compared to 96% in warmer and frost-free plots (p < 0.05). A visual assessment of soil macroaggregation showed that physical processes were the main drivers of soil macroaggregation in colder plots, with 66% of the 5–12.5 mm fraction and the whole 3.15–5 mm fraction. Conversely, we found a balanced contribution of biological and physical aggregation pathways in warmer plots. All identified macroaggregate types could be classified, depending on their organic matter (OM) quality, using principal component analyses of their near infrared spectra. Such spectral classifications indicated temporal changes in OM quality of macroaggregates, from formation to colonization by fine roots, suggesting ecosystem-specific ontogenic trajectories for soil macroaggregation. Further physico-chemical characterizations of soil macroaggregates and Ah horizons showed that soil organic carbon content in the Ah horizon was constant along the gradient, whereas soil erodibility was reduced in warmer soils, which prevented the occurrence of fragile macroaggregates formed by freeze-thaw events. Our study thus suggests changes in the erodibility of mountain forest soils under changing climate. Soil erodibility could be affected either positively under warmer conditions, or negatively, under increased soil frost.     

Land-Use Intensity Effects on Soil Organic Carbon Accumulation Rates and Mechanisms

Restoring soil C pools by reducing land use intensity is a potentially high impact, rapidly deployable strategy for partially offsetting atmospheric CO₂ increases. However, rates of C accumulation and underlying mechanisms have rarely been determined for a range of managed and successional ecosystems on the same soil type. We determined soil organic matter (SOM) fractions with the highest potential for sequestering C in ten ecosystems on the same soil series using both density- and incubation-based fractionation methods. Ecosystems included four annual row-crop systems (conventional, low input, organic and no-till), two perennial cropping systems (alfalfa and poplar), and four native ecosystems (early successional, midsuccessional historically tilled, midsuccessional never-tilled, and late successional forest). Enhanced C storage to 5 cm relative to conventional agriculture ranged from 8.9 g C m⁻² y⁻¹ in low input row crops to 31.6 g C m⁻² y⁻¹ in the early successional ecosystem. Carbon sequestration across all ecosystems occurred in aggregate-associated pools larger than 53 μm. The density-based fractionation scheme identified heavy-fraction C pools (SOM > 1.6 g cm⁻³ plus SOM < 53 μm), particularly those in macroaggregates (>250 μm), as having the highest potential C accumulation rates, ranging from 8.79 g C m⁻² y⁻¹ in low input row crops to 29.22 g C m⁻² y⁻¹ in the alfalfa ecosystem. Intra-aggregate light fraction pools accumulated C at slower rates, but generally faster than in inter-aggregate LF pools. Incubation-based methods that fractionated soil into active, slow and passive pools showed that C accumulated primarily in slow and resistant pools. However, crushing aggregates in a manner that simulates tillage resulted in a substantial transfer of C from slow pools with field mean residence times of decades to active pools with mean residence times of only weeks. Our results demonstrate that soil C accumulates almost entirely in soil aggregates, mostly in macroaggregates, following reductions in land use intensity. The potentially rapid destruction of macroaggregates following tillage, however, raises concerns about the long-term persistence of these C pools.     

长期不同植被覆盖对黑土团聚体内有机碳组分的影响

为探究黑土团聚体内土壤有机碳(SOC)的“分馏”特征, 揭示不同植被覆盖下土壤团聚体的固碳机制, 该文以中国科学院海伦农业生态系统国家野外综合研究站内不同植被覆盖(草地、农田和裸地)长期定位实验的土样为研究对象, 利用团聚体湿筛分组、有机碳物理和化学分组相结合的方法, 研究了黑土团聚体及其内部的碳密度和腐殖质组分的碳分配特征。研究发现, 黑土经过不同植被覆盖31年后, 长期草地覆盖使土壤表层SOC、全氮(TN)含量显著增加, 农田和无植被覆盖的裸地SOC含量减少, 且在裸地显著降低。3种处理中, 2-0.25 mm (含2 mm, 下同)粒级团聚体均为优粒级。土壤团聚体的稳定性顺序为草地>农田>裸地。草地覆盖使土壤大团聚体的比例和有机碳库增加, 微团聚体和粉黏粒所占比例和碳库均减少, 说明草地覆盖促进了土壤大团聚体形成, 土壤固碳能力显著增强。而农田和裸地因外源碳投入少, 有机碳含量均是微团聚体>大团聚体>粉黏粒, SOC主要分布在微团聚体中。不同植被覆盖处理对土壤团聚体内密度组分和腐殖质各组分碳的富集“分馏”作用很明显, 与农田和裸地相比, 长期草地植被覆盖处理>2 mm和2-0.25 mm粒级团聚体中轻组碳含量富集的较多, 2-0.25 mm粒级团聚体中富里酸、胡敏酸和胡敏素的碳富集均最高, 而农田和裸地促进了微团聚体内腐殖质碳的富集。草地覆盖显著增加了大团聚体内活性有机碳组分, 来源于植物的碳首先进入到大粒径的团聚体中, 使土壤团聚结构显著改善, 农田和无植被覆盖的裸地土壤中轻组碳含量显著降低, 团聚体内有机碳以重组碳和胡敏素为主, 稳定化程度更高。     

Incorporation of Plant Residues into Soil Organic Matter Fractions With Grassland Management Practices in the North American Midwest

Disturbed grassland soils are often cited as having the potential to store large amounts of carbon (C). Fertilization of grasslands can promote soil C storage, but little is known about the generation of recalcitrant pools of soil organic matter (SOM) with management treatments, which is critical for long-term soil C storage. We used a combination of soil incubations, size fractionation and acid hydrolysis of SOM, [C], [N], and stable isotopic analyses, and biomass quality indices to examine how fertilization and haying can impact SOM dynamics in Kansan grassland soils. Fertilized soils possessed 113% of the C possessed by soils subjected to other treatments, an increase predominantly harbored in the largest size fraction (212–2,000 μm). This fraction is frequently associated with more labile material. Haying and fertilization/haying, treatments that more accurately mimic true management techniques, did not induce any increase in soil C. The difference in ¹⁵N-enrichment between size fractions was consistent with a decoupling of SOM processing between pools with fertilization, congruent with gains of SOM in the largest size fraction promoted by fertilization not moving readily into smaller fractions that frequently harbor more recalcitrant material. Litterfall and root biomass C inputs increased 104% with fertilization over control plots, and this material possessed lower C:N ratios. Models of incubation mineralization kinetics indicate that fertilized soils have larger pools of labile organic C. Model estimates of turnover rates of the labile and recalcitrant C pools did not differ between treatments (65.5 ± 7.2 and 2.9 ± 0.3 μg C d⁻¹, respectively). Although fertilization may promote greater organic inputs into these soils, much of that material is transformed into relatively labile forms of soil C; these data highlight the challenges of managing grasslands for long-term soil C sequestration.     

Impact of land use change on soil aggregate dynamics in the dry tropics

A 2‐year study was conducted to elucidate land use change (LUC) impact on the distribution of aggregate size fractions and associated carbon (C) concentration involving natural forest (NF), degraded forest (DF), cropland (CL), and biofuel plantation (JP, Jatropha plantation) in the dry tropical region of India across the soil profile (0–10, 10–20, and 20–30 cm). Across the seasons and the land uses, the proportion of macro‐ and microaggregates was maximum at upper and minimum at lower layer whereas mesoaggregates increase with depth. The trend of macro‐ and microaggregate fractions through the soil profile was NF > JP > DF > CL whereas that of mesoaggregates was CL > DF < JP > NF. Dry mean weight diameter was highest at upper layer and decreased down the depth in all the land uses and followed the trend NF > JP > DF > CL. Aggregate associated organic carbon (OC) concentration in all the fractions decreased from NF to DF, CL, or JP indicates that macroaggregate associated OC concentration was more susceptible to loss than that of meso‐ and microaggregate associated OC concentration. LUC induced decline in macroaggregate associated OC stock and increase in meso‐ and microaggregate associated OC stock; indicated redistribution of OC stock among aggregate fractions. It may be concluded that JP in dry tropics can be an efficient strategy for rehabilitation of degraded land as it improves aggregate structure and stability in the whole profile and aggregate associated OC stock in upper layer of soil.     

A comparison of phytoplankton size-fractions in Mondsee,an alpine lake in Austria: distribution,pigment composition and primary production rates

Production rates, abundance, chlorophyll a (Chl a) concentrations and pigment composition were measured for three size classes (<2 μm, 2–11 μm and >11 μm) of phytoplankton from May to December 2000 in deep, mesotrophic, alpine lake Mondsee in Austria. The study focuses on differences among phytoplankton size fractions characterised by their surface area to volume ratio ([mm² l⁻¹: mm³l⁻¹]), pigment distribution patterns and photosynthetic rates. Particular attention was paid to autotrophic picophytoplankton (APP, fraction <2 μm) since this size fraction differed significantly from the two larger size fractions. Among the three fractions, APP showed the highest surface area to volume ratios and a high persistence in the pattern of lipophilic pigments between temporarily and spatially successive samples (about 80% similarity of pigment composition between samples over seasons and depths). The epilimnetic abundance of APP varied seasonally with an annual maximum of 180 × 10³ cells ml⁻¹ in June (at 4–9 m). The minimum (October at 12 m) was more than an order of magnitude lower (4.9 × 10³ ml⁻¹). APP peaked during autumn and contributed between 24% and 42% to the total area-integrated Chl a (10–23 mg m⁻²) and between 16% and 58% to total area-integrated production (5–64 mg m⁻²  h⁻¹) throughout seasons.     

Carbon isotope ratio and photosynthetic activity of phytoplankton in the eutrophic Mikawa Bay,Japan

Primary production by phytoplankton in the eutrophic Mikawa Bay, Japan, was studied by simultaneous measurements of natural carbon isotope ratio (δ ¹³C) and short-term carbon uptake rates (¹³C tracer study) of size-fractionated nannoplankton (<10 μm) and net plankton (>10 μm) samples. Short-term photosynthetic rates, which represent the physiological state of algae, were variable regardless of standing stock sizes. Theδ ¹³C values of particulate organic carbon (POC) in June and July displayed horizontal variations for both the net plankton fraction (−19.8 to −12.7‰) and the nannoplankton fraction (−22.0 to −12.8‰). For both fractions, low concentrations of POC had more negativeδ ¹³C values (−22 to −18‰). Highδ ¹³C values for the net plankton were found when POC concentrations were much higher, due to red tide. This suggests that the increase in algal standing crop for the net plankton fraction resulted from accelerated photosynthetic activity. However the nannoplankton fractions with higher POC values have relatively lowδ ¹³C values.     

Elevated [CO2], temperature increase and N supply effects on the accumulation of below-ground carbon in a temperate grassland ecosystem

The effects of elevated [CO₂] (700 μl l⁻¹ [CO₂]) and temperature increase (+3 °C) on carbon accumulation in a grassland soil were studied at two N-fertiliser supplies (160 and 530 kgN ha⁻¹ year⁻¹) in a long-term experiment (2.5 years) on well established ryegrass swards (Lolium perenne L.,) supplied with the same amounts of irrigation water. For all experimental treatments, the C:N ratio of the top soil organic matter fractions increased with their particle size. Elevated CO₂ concentration increased the C:N ratios of the below-ground phytomass and of the macro-organic matter. A supplemental fertiliser N or a 3 °C increase in elevated [CO₂] reduced it. At the last sampling date, elevated [CO₂] did not affect the C:N ratio of the soil organic matter fractions, but increased significantly the accumulation of roots and of macro-organic matter above 200 μm (MOM). An increased N-fertiliser supply stimulated the accumulation of the non harvested plant phytomass and of the OM between 2 and 50 μm, without positive effect on the macro-organic matter >200 μm. Elevated [CO₂2] increased C accumulation in the OM fractions above 50 μm by +2.1 tC ha⁻¹, on average, whereas increasing the fertiliser N supply led to an average supplemental accumulation of +0.8 tC ha⁻¹. There was no significant effect of a 3 °C temperature increase under elevated [CO₂] on C accumulation in the OM fractions above 50 μm. This revised version was published online in June 2006 with corrections to the Cover Date.     

Altitudinal changes in carbon storage of temperate forests on Mt Changbai, Northeast China

A number of studies have investigated regional and continental scale patterns of carbon (C) stocks in forest ecosystems; however, the altitudinal changes in C storage in different components (vegetation, detritus, and soil) of forest ecosystems remain poorly understood. In this study, we measured C stocks of vegetation, detritus, and soil of 22 forest plots along an altitudinal gradient of 700–2,000 m to quantify altitudinal changes in carbon storage of major forest ecosystems (Pinus koraiensis and broadleaf mixed forest, 700–1,100 m; Picea and Abies forest, 1,100–1,800 m; and Betula ermanii forest, 1,800–2,000 m) on Mt Changbai, Northeast China. Total ecosystem C density (carbon stock per hectare) averaged 237 t C ha⁻¹ (ranging from 112 to 338 t C ha⁻¹) across all the forest stands, of which 153 t C ha⁻¹ (52–245 t C ha⁻¹) was stored in vegetation biomass, 14 t C ha⁻¹ (2.2–48 t C ha⁻¹) in forest detritus (including standing dead trees, fallen trees, and floor material), and 70 t C ha⁻¹ (35–113 t C ha⁻¹) in soil organic matter (1-m depth). Among all the forest types, the lowest vegetation and total C density but the highest soil organic carbon (SOC) density occurred in Betula ermanii forest, whereas the highest detritus C density was observed in Picea and Abies forest. The C density of the three ecosystem components showed distinct altitudinal patterns: with increasing altitude, vegetation C density decreased significantly, detritus C density first increased and then decreased, and SOC density exhibited increasing but insignificant trends. The allocation of total ecosystem C to each component exhibited similar but more significant trends along the altitudinal gradient. Our results suggest that carbon storage and partitioning among different components in temperate forests on Mt Changbai vary greatly with forest type and altitude.     

Plant litter chemistry alters the content and composition of organic carbon associated with soil mineral and aggregate fractions in invaded ecosystems

Through the input of disproportionate quantities of chemically distinct litter, invasive plants may potentially influence the fate of organic matter associated with soil mineral and aggregate fractions in some of the ecosystems they invade. Although context dependent, these native ecosystems subjected to prolonged invasion by exotic plants may be instrumental in distinguishing the role of plant–microbe–mineral interactions from the broader edaphic and climatic influences on the formation of soil organic matter (SOM). We hypothesized that the soils subjected to prolonged invasion by an exotic plant that input recalcitrant litter (Japanese knotweed, Polygonum cuspidatum) would have a greater proportion of plant‐derived carbon (C) in the aggregate fractions, as compared with that in adjacent soil inhabited by native vegetation that input labile litter, whereas the soils under an invader that input labile litter (kudzu, Pueraria lobata) would have a greater proportion of microbial‐derived C in the silt‐clay fraction, as compared with that in adjacent soils that receive recalcitrant litter. At the knotweed site, the higher C content in soils under P. cuspidatum, compared with noninvaded soils inhabited by grasses and forbs, was limited to the macroaggregate fraction, which was abundant in plant biomarkers. The noninvaded soils at this site had a higher abundance of lignins in mineral and microaggregate fractions and suberin in the macroaggregate fraction, partly because of the greater root density of the native species, which might have had an overriding influence on the chemistry of the above‐ground litter input. At the kudzu site, soils under P. lobata had lower C content across all size fractions at a 0–5 cm soil depth despite receiving similar amounts of Pinus litter. Contrary to our prediction, the noninvaded soils receiving recalcitrant Pinus litter had a similar abundance of plant biomarkers across both mineral and aggregate fractions, potentially because of the higher surface area of soil minerals at this site. The plant biomarkers were lower in the aggregate fractions of the P. lobata‐invaded soils, compared with noninvaded pine stands, potentially suggesting a microbial co‐metabolism of pine‐derived compounds. These results highlight the complex interactions among litter chemistry, soil biota, and minerals in mediating soil C storage in unmanaged ecosystems; these interactions are particularly important under global changes that may alter plant species composition and hence the quantity and chemistry of litter inputs in terrestrial ecosystems.     

<Emphasis Type="Italic">Vibrio cholerae</Emphasis> in waters of the Sunderban mangrove: relationship with biogeochemical parameters and chitin in seston size fractions

Wetland dynamics are probably linked to cholera endemicity in South Asia. We focus on links between Vibrio cholerae abundance, chitin content and suspended particle load in size fractions of suspended particulate matter (SPM) along the salinity gradient of Sunderban mangrove waters. SPM decreased downstream, while salinity increased from 0.2 to 4. Particulate organic carbon (90 ± 25 μM) and nitrogen (9.1 ± 3.3 μM) highly correlated with SPM and turbidity, suggesting a significant contribution of fine particles to organic matter. Total chitin ranged 1–2 mg/l and decreased downstream. The distribution among size fractions of SPM, chitin and V. cholerae O1 (the bacterial serogroup mainly associated with cholera epidemics) was similar, with ~98% of the total in the fraction <20 μm. In comparison, the number of V. cholerae O1 attached to zooplankton and microplankton size classes >20 μm was almost negligible, in contrast to usual assumptions. Thus, microdetritus, nanoplankton and fungal cells in size classes <20 μm represent a chitinaceous substrate on which V. cholerae can grow and survive. Total bacteria, cultivable vibrios and V. cholera O1 increased 5–10 times downstream, together with salinity and nitrite concentration. Overall, nitrate and silicate concentrations were relatively constant (>22 μM N and 100 μM Si). However, nitrite increased ~9 times in the outer sector, reaching ~1.2 μM N, probably as a result of increased abundance of nitrate-reducing vibrios. A characterization of Vibrio habitats that takes account of the presence of nitrate-reducing bacteria could improve the understanding of both mangrove nitrogen cycling and cholera seasonality.     

Biochemical characteristics of surface sediments on the eastern Weddell Sea continental shelf, Antarctica: is there any evidence of seasonal patterns?

Biochemical characteristics of seafloor sediment off Austasen in the southeastern Weddell Sea were assayed in samples recovered in the early autumn and late spring of 2000 and 2003, respectively. Sediment was separated in the grain-size fractions >200 μm and <200 μm to distinguish biochemical characteristics in the fraction available for benthic suspension feeders (<200 μm). In the bulk sediment, the lipid (LPD) and carbohydrate (CHO) contents were significantly different between seasons with higher LPD content in the early autumn and higher CHO content in the late spring. In the grain-size fractions <200 μm, the LPD and protein (PRT) contents were significantly higher in the early autumn meaning that in this season the fraction available for benthic suspension feeders presented higher nutritive value. The relatively higher CHO concentrations observed in each fraction in the late spring were attributed to refractory matter, whereas the higher PRT and LPD concentrations found during the early autumn were associated with planktonic material settled after the summer phytoplankton bloom. Our results suggest that there is seasonal variation in the composition of organic matter in the sediment, with better nutritive quality in the early autumn, especially in the grain-size fraction available for benthic suspension feeders. These variations also suggest that the benthic community exploits the fresh organic matter accumulated after the summer throughout the Antarctic dark months leaving the sediment almost exhaust of LPD and with higher CHO contents, presumably of refractory nature, at the onset of the seasonal phytoplankton bloom of the following year.     

Carbon storage in relation to soil size-fractions under tropical tree-based land-use systems

The extent of carbon (C) sequestration in soils under agroforestry systems in relation to soil types (fraction sizes) and vegetation structure remains largely unexplored. This study examined soil C storage, an indicator of C sequestration potential, in homegardens (HGs), natural forest, and single-species stands of coconut (Cocos nucifera), rice (Oryza sativa)-paddy, and rubber (Hevea brasiliensis), in Thrissur district, Kerala, India. Soil samples collected from four depth zones up to 1 m were fractionated to three size classes (250 – 2000 µm, 53 – 250 µm, ?<?53 µm) and their total C content determined. Total C stock (Mg ha^?1) was highest in forests (176.6), followed by managed tree-based systems, and lowest in rice-paddy field (55.6). The results show storage of higher amounts of C in the ?<?53 µm fraction, the most stable form of C in soil, up to one- meter depth, in land-use systems with high stand density of trees such as forests and small-sized HG. Although the results do not allow comparison of changes in soil C stock in different land-use systems, they show higher C storage in soils under tree-based land-use systems compared with the treeless (rice-paddy) system, especially in lower soil depths, suggesting the higher soil C sequestration potential of tree-based systems, and thereby their role in reducing atmospheric concentration of carbon dioxide.     

Is nitrification affected by the diameter and other properties of soil aggregates?

Nitrification was measured in fractions of chernozemic rendzina and lessivē soil differing in aggregate size. In both soils the maximum rates occurred in aggregates between 1 and 3 mm in diameter. The effects of structural and other properties (particle composition, pore-size distribution, surface area, organic C and total N content, ratio of air volume to water volume in aggregates) proved to be insignificant except for the nitrification rate in the lessivē soil, which positively correlated with the fraction of particles between 20 and 50 μm in diameter.