Spatial and temporal variation of the ichthyoplankton in a subtropical river in Brazil

Studies that assess reproduction dynamics and ichthyoplankton distributions are scarce for the upper Uruguay River, especially in environments such as tributary mouths. Therefore, this study aimed to evaluate: (i) ichthyoplankton composition; (ii) spatial and temporal variation in ichthyoplankton abundance; and (iii) relationships between environmental variables and the abundance of ichthyoplankton during one annual cycle in this region. Monthly samples were collected from September 2001 to August 2002 in 48 h cycles at 6 h intervals between each sampling. Samples of eggs and larvae were collected from three of the main tributaries of the region (Ligeiro, Palomas and Chapecó rivers) and from three stretches of the Uruguay River near the confluence of these tributaries. Surface samples were collected with a 0.5 mm mesh cylindro-conical net. In general, reproductive seasonality was well-defined between October and February. It was most intense from November to January, when the photoperiod reached its highest values, flow was decreased, and the water temperature was increased. Based on egg and larval distributions, we found that spawning occurred mainly in the Ligeiro and Chapecó tributaries and in the Uruguay/Chapecó section. In contrast, fish spawning in the sites downstream of dams was more restricted. Finally, a difference was observed between the egg and larval distributions of the main river and its tributaries: the greatest reproductive activity in the tributaries occurred during periods of high flow and increased water temperature, while in the main river, more eggs and larvae were observed when the flow decreased and the water temperature increased.     

Species composition and distribution of ichthyoplankton in the waters of northeast Sakhalin

Data on the species composition and abundance of the ichthyoplankton obtained in 2012, 2014, and 2015 in the waters of northeast Sakhalin are presented; these data were collected during the standard accounting surveys to estimate the egg concentration and breeders of Alaska pollock Theragra chalcogramma. The areas of the main concentrations of eggs and larvae of a number of commercial fish species have been determined, interannual variations in their abundance have been analyzed, and the distribution of ichthyoplankton with some parameters of the environment, such as depth, temperature, and main currents, has been linked. During the study period, 30 species representing 11 families were recorded in the ichthyoplankton. The average concentration of ichthyoplankton varies within the range of 113–201 ind./m². The pollock eggs absolutely dominated by 78–89%; followed by the eggs of the Bering flounder Hippoglossoides robustus (5–8%). It was found that the number of eggs and larvae of flounders and of a number of the other fish species in the northern part of the study area increases during the years characterized by a large volume of runoff of Amur River.     

Identification of spawning sites and natural nurseries of fishes in the upper Paraná River,Brazil

Synopsis We studied the timing of migratory fish spawning in the last dam-free stretch of the upper Paraná River and in Itaipu Reservoir. Eggs were more common in the Amambai and Ivaï Rivers, while larvae predominated in the Paraná River and in Itaipu Reservoir. Both eggs and larvae were more abundant at night. The highest abundance of eggs was in October and that of larvae in November. Migratory species predominated in the Amambai and Paraná Rivers, and non-migratory species in the Ivaï River and Itaipu Reservoir. The predominance of eggs in the upper and middle portions, and larvae in the lower, infer that there are spawning sites in the former and nurseries in the latter. The high nocturnal abundance of eggs is associated with spawning at sunset and that of larvae with feeding, avoidance of predators and nocturnal disorientation. The presence of tributaries such as the Amambai and Ivaí Rivers in the last dam-free stretch of the Paraná River is extremely important to the maintenance of regional fish diversity and fish stocks in both the Paraná River and Itaipu Reservoir.     

青岛崂山青山湾人工鱼礁区及附近海域鱼卵仔稚鱼种类组成与数量分布

为研究人工鱼礁对产卵鱼类的诱集效果和庇护效应,2014—2015年对青岛崂山青山湾海域人工鱼礁区及附近海域鱼卵和仔稚鱼的种类组成和数量分布进行了水平和垂直拖网调查. 2014年春、夏、秋3个季节的7个航次调查中,共采集鱼卵7306粒、仔稚鱼52尾,隶属于4目9科11属12种;2015年同期进行的13个航次调查中,共采集鱼卵10373粒、仔稚鱼159尾,隶属于6目11科14属15种.2年间鱼卵和仔稚鱼样品均以鲈形目数量最多,鲽形目次之,其中鱼卵样品中仅有少鳞鱚和短吻红舌鳎构成优势种;仔稚鱼样品以少鳞鱚优势度最高,但不存在仔稚鱼优势种.鱼卵和稚鱼的高优势度物种的季节间演替明显.春、夏、秋季鱼类浮游生物群落Margalef丰富度指数、Shannon多样性指数和Pielou均匀度指数平均值均较低,说明该海域鱼类浮游生物群落结构稳定性较低.2年间所采集物种对应的成鱼平均营养级分别为3.71和3.78,均属第三营养级中的低级肉食性鱼类,绝大多数为暖温种,无冷温性种类,表现出明显的暖温带特点.综合分析认为,人工鱼礁区鱼类浮游生物群落的多样性相对较高,这与鱼礁区流速和流场特征及复杂的空间异质性有关.     

DNA barcoding of freshwater ichthyoplankton in the Neotropics as a tool for ecological monitoring

Quantifying and classifying ichthyoplankton is one of the most effective ways of monitoring the recruitment process in fishes. However, correctly identifying the fish based on morphological characters is extremely difficult, especially in the early stages of development. We examined ichthyoplankton from tributaries and reservoirs along the middle stretch of the Paranapanema River, one of the areas most impacted by hydroelectric projects in the Neotropics. Matching DNA sequences of the COI gene (628–648 bp) allowed us to identify 99.25% of 536 samples of eggs (293) and larvae (243) subjected to BOLD‐IDS similarity analysis with a species‐level threshold of 1.3%. The results revealed 37 species in 27 genera, 15 families and four orders, some 23.8% of documented fish species in the Paranapanema River. Molecular identification meant that we could include data from egg samples that accounted for about 30% of the species richness observed. The results in this study confirm the efficacy of DNA barcoding in identifying Neotropical ichthyoplankton and show how the data produced provide valuable information for preparing plans for conserving and managing inland waters.     

Year-to-year variation in larval fish assemblages of the Southern North Sea

In order to test the temporal stability within and the reproducibility of larval fish assemblages between years, the larval fish assemblage at Helgoland Roads, North Sea (NE Atlantic) was quantitatively sampled almost daily from January 2003 to December 2005. The survey resulted in a total of 462 samples containing 50,632 larval fish of at least 42 taxa. In winter the larval fish assemblage was mainly dominated by larvae emerging from demersal eggs. This changed gradually to larvae hatching from pelagic eggs. Larvae from pelagic eggs dominated the ichthyoplankton assemblage in summer. A remarkably stable seasonality in terms of dominance patterns with recurring, season-specific fish assemblages was observed over the 3 years, despite substantial variation in environmental conditions such as a temperature difference of almost 20°C between summer and winter. The lesser sandeel (Ammodytes marinus), was the only species which showed significant fluctuations in abundance between the years. After removal of this species from the analysis, the dominance patterns of the remaining fish species were almost identical between years.     

长江口水域鱼卵、仔稚鱼种类组成和数量的分布与变化

根据2005年4和11月、2006年4和9月在长江河口水域进行的鱼卵、仔稚鱼种类和数量调查,并结合1990年9月和1991年3月的历史数据,对该水域的鱼卵、仔稚鱼群落结构的种类组成和数量的季节变化作了研究,其结果共发现鱼卵、仔稚鱼36种(类),以海洋鱼类种类最多。秋季航次鱼卵、仔稚鱼的平均种类数和丰度均高于春季。河口咸淡水区鱼卵总数显著高于淡水区,而仔稚鱼总数略低于淡水区。与1990—1991年数据相比,2005—2006年春、秋季的鱼卵和仔稚鱼丰度均有所增加。1990、2006年秋季(9月)鱼卵、仔稚鱼种类组成差异较大,特别是翘嘴红鲌和太湖新银鱼丰度差异较大。这些都说明近20年来,长江河口水域鱼卵、仔稚鱼种类组成和数量均发生了明显的改变。     

Structure and diversity of fishes in a freshwater and coastal subtropical lagoon

This study examined the fish communities of Peri Lagoon in southern Brazil to aid in the development of an effective management plan because the area is under threat from human activities. Sampling of fish fauna, ichthyoplankton and limnological data were compared between sites, differing by habitat type and characteristics such as depth, substratum composition and vegetation type. Results were significantly related to site, with the highest diversity and abundance recorded at shallow vegetated sites. A total of 14 fish species were recorded throughout the lagoon, with the most abundant being Hyphessobrycon luetkenii. Of the 14 species, half were sampled at their larval stage, suggesting a healthy and protected system. Significantly more larvae and eggs were collected during colder months (autumn to winter) and at sites closer to stream flow, possibly owing to increased food sources and habitat protection. This study highlights the importance of Peri Lagoon as a nursery ground for a wide range of fish species, providing essential information for incorporation into the future protection of fish stocks throughout Brazil.     

Impacts of variability of habitat factors on species composition of ichthyoplankton and distribution of fish spawning ground in the Changjiang River estuary and its adjacent waters

During June, August and October 2006, there were three multi-disciplinary surveys carried out in the Changjiang River estuary and its adjacent waters (122°00′–125°00′E, 27°50′–34°00′N) by R/V Beidou to study the species composition and abundance of ichthyoplankton (including fish eggs, larvae and juveniles), the spatial distribution of fish spawning ground and their relationship with habitat factors. There were 29, 29 and 25 grid stations sampled in the three cruises, respectively. The ichthyoplankton samples were collected by horizontally towing with a macro-plankton net (mouth diameter 80 cm, length 270 cm, mesh size 0.50 mm) at the sea surface, and the towing speed was 3.0 n mile/h at each sampling station. The towing lasted for 10 min. After hauling for each station, habitat factors including temperature and salinity were measured by Sea Bird-25 CTD. Samples were preserved in 5% formaldehyde solution immediately after sampling for analysis in laboratory. Since the trawl speed could not be accurately evaluated due to the effects of ocean currents and wind-induced wave, the amount of ichthyoplankton was evaluated by actual number of the sampling haul in each station. Ichthyoplankton collected were divided into three categories: dominant species, important species and main species by the index of relative importance (IRI). There are 71 species (including 1200 fish eggs and 2575 fish larvae and juveniles) collected during 3 cruises and 59 species have been correctly identified to species level, which belongs to 50 genera, 37 families and 9 orders; while 5 species can only be identified to genera level, 1 species only identified to family level and 6 species identified to order level. These 59 species identified to species level and 5 species identified to genera level are divided into three ecological patterns, i.e., brackish water species, neritic water species and coastal water species. Warm water species have 34 species in those 59 species identified to species level, accounting for 57.63%, warm temperature species have 25 species, accounting for 42.37%. According to the analysis of IRI, the dominant species are Engraulis japonicus (in June and August, that is important species in October), Scomber japonicus (in August), and Johnius grypotus (in October) during the survey; important species are Cynoglossus joyneri (in June and August), Trichiurus lepturus (in June, August and October), Gonorhynchus abbreviatus (in August), Stolephorus commersonii (in October), Saurida undosquamis (in October) and Saurida elongate (in October), and main species have 12 species in June, 9 species in August and 10 species in October, respectively. The amount of fish eggs and larvae of the dominant species, important species and main species (28 species) are 97.50% and 97.13% of the total amount of fish eggs and larvae, respectively, which are the important composition of fish eggs and larvae in the Changjiang River estuary and its adjacent waters.
In June and August of 2006, if compared with that in corresponding months in 1986, there are great changes in the habitat factors especially for temperature and salinity in the investigating areas: high salinity water from off-shelf is much closer to the coastal areas which results in the dramatic increase of sea surface salinity during all three surveys. Sea surface temperature, on the other hand, decreases distinctively in June, but significantly increases in August. The run-off of the Changjiang River greatly reduced due to the long-term drought in summer 2006, which is responsible for the great changes of habitat factors in the Changjiang River estuary and its adjacent waters. The habitat of the Changjiang River estuary is greatly changed, which consequently has significant influences on the spawning, breeding and the spatial distribution of spawning ground of neritic water species, such as Sardinella zunasi, Thryssa kammalensis, Thryssa mystax, Setipinna taty and S. commersonii ect, and coastal water species, such as Ilisha elongate and Konosirus punctatus ect.     

黄海中北部不同断面鱼卵、仔稚鱼群落结构特征

为了解黄海中北部近岸海域不同断面的鱼卵、仔稚鱼群落结构特征, 基于2017年5月、6月和7月对黄海中北部近岸海域内不同断面表层水平拖网的调查数据, 对该海域鱼卵和仔稚鱼的种类组成、数量分布、多样性等进行分析。结果表明: 3个航次共采获鱼卵5493粒, 仔稚鱼43尾, 经鉴定共20种, 隶属于7目16科20属, 种类以鲈形目为主要类群。采获鱼卵、仔稚鱼的数量在不同月份和不同断面间有所差异, 总体来看数量分布不均匀。采获鱼卵、仔稚鱼对应成鱼的适温类型主要由暖温种和暖水种组成, 仅有少量冷温种, 各生态类型种类数随断面不同有所变化, 暖温种在调查海域内由北向南呈递减的趋势, 暖水种则呈递增的趋势。鱼卵、仔稚鱼优势种和重要种组成在不同月份和不同断面间均有所差异, 鳀(Engraulis japonicus)为5月航次调查海域及T1和T2断面的鱼卵优势种, 仔稚鱼没有出现优势种。3个航次采集的鱼卵、仔稚鱼对应成鱼平均营养级分别为3.58、3.51和3.41, 呈现逐渐降低的趋势。调查海域内鱼卵、仔稚鱼的丰富度指数(D)、多样性指数(H′)和均匀度指数(J′)均以5月航次最高, 6月航次最低。此外, 两个断面各站位之间的丰富度指数(D)、多样性指数(H′)和均匀度指数(J′)均与深度关系密切。研究为黄海海域产卵场的养护及海洋鱼类早期补充群体资源的量化管理提供科学依据。     

Species composition and distribution of summer ichthyoplankton in Chupa Estuary (Kandalaksha Bay of the White Sea)

On the basis of ichthyoplankton surveys performed in July 2002 and June 2004–2005 in Chupa Estuary and adjacent waters of Kandalaksha Bay, species composition and distribution of eggs and larvae of fish were studied. Early stages of development of seven fish species were found in the composition of ichthyoplankton. The bulk of abundance of ichthyoplankton was formed of Clupea pallasii marisalbi larvae. It was shown that the sites of aggregation of larval C. pallasii marisalbi from June to July are constant and located in the central and preestuarine areas of Chupa Estuary. Possible routes of their passive migrations within Chupa Estuary and the adjacent water area of Kandalaksha Bay are considered. It is suggested that the drift of larvae beyond the estuary proceeds slowly, and after hatching they can long stay in the estuary concentrating in its central and preestuarine areas.     

Temporal and spatial distributions of the fish larval assemblages of the Ivinheima River sub-basin (Brazil)

Fish, like other animals, choose environments for reproduction that are favorable for their offspring’s initial development. For example, these environments may be chosen to provide shelter and food. This study examined the fish larvae inhabiting the Ivinheima River sub-basin. The study aimed to (i) characterize the taxonomic composition of the larval fish fauna, (ii) analyze the structure of the larval assemblage, and (iii) verify the relationship between the larval assemblages and environmental variables. The sampling areas included three environments: the Ivinheima River, the Finado Raimundo Lagoon and the Patos Lagoon. Sampling was performed between October 2002 and March 2006 during four reproductive periods (RPs). The data were analyzed with correspondence analysis (CA) and canonical correlation analysis (CCA). A total of 120 619 larvae were collected. These larvae belonged to several species characterized by different reproductive strategies. Our results showed differences between the composition of the Ivinheima River’s assemblages, where there were more larvae of migratory fish, and the lagoons, where larvae of sedentary species were predominant. In addition, differences were found among the RPs evaluated in the Ivinheima River: the first and second RPs were characterized by milder floods and by a greater abundance of migratory piscivore larvae, whereas the third and fourth RPs had more outflow and a greater abundance of larvae of detritivore and omnivore species. We conclude that the Ivinheima River plays a significant role in the maintenance of native migratory fish stocks in the upper Paraná River basin and that the environment shows a segregation of the spatial and temporal composition and abundance of larvae related to running and flooding/standing water.     

Ichthyoplankton in the plankton community of the Crimean Peninsula shelf zone (Black Sea) in July 2010

Data on the species composition and quantitative distribution of ichthyoplankton, zooplankton, and jelly fish macroplankton from different areas of the Crimean Peninsula shelf zone in July 2010 are presented. It has been shown that the structure of species composition and the maximum abundance of ichthyoplankton are comparable to those in July 1988, i.e., until negative changes in the ecosystem of the Black Sea shelf, which took place in the 1990s. The average abundance of ichthyoplankton in July 2010 corresponds to the lowest long-term data obtained in July 1950s and 1960s. The effect produced by organochlorine contaminants and by the abundance of jelly fish macroplankton on the survival of pelagic fish eggs and fish larvae is studied. The prevalence of juvenile copepods in the guts of fish larvae, as well as the low proportion of fish larvae with empty stomachs (<10%), if compared to the data obtained in the 1990s (50–90%), point to the favorable trophical conditions for fish larvae in the area of investigation.     

DNA barcoding and morphological identification of neotropical ichthyoplankton from the Upper Paraná and São Francisco

The identification of fish larvae from two neotropical hydrographic basins using traditional morphological taxonomy and DNA barcoding revealed no conflicting results between the morphological and barcode identification of larvae. A lower rate (25%) of correct morphological identification of eggs as belonging to migratory or non‐migratory species was achieved. Accurate identification of ichthyoplankton by DNA barcoding is an important tool for fish reproductive behaviour studies, correct estimation of biodiversity by detecting eggs from rare species, as well as defining environmental and management strategies for fish conservation in the neotropics.     

Spatio-temporal variability of ichthyoplankton and its relationship with oceanographic conditions at the shelf break off Chilean Patagonia (43°S–51°S)

Larval fish composition and abundance have been studied in fjords of south Patagonia. However, the ichthyoplankton of the adjacent shelf and slope waters of the Pacific Ocean, which is an important spawning and nursery ground for demersal fishery species (e.g. austral hake and Patagonian grenadier), remains largely unknown. To compare ichthyoplankton occurrence with environmental conditions in August 2013 and 2014 (austral winter), two bio-oceanographic cruises were carried out between 43° and 51°S. Conductivity, temperature and depth (CTD) data and ichthyoplankton samples were collected. The highest frequency of occurrence (FO) was observed for eggs of lightfish Maurolicus parvipinnis (84 and 91% FO in 2013 and 2014, respectively) and larvae of the myctophid Lampanyctodes hectoris (60 and 94% FO, respectively). Ichthyoplankton composition and abundance varied significantly between years, and richness varied from 10 (2013) to 18 taxa (2014). Only larval L. hectoris showed a significant increase in abundance during the winter of 2014. Water column temperature and salinity were significantly different between years; the water was warmer and saltier in 2013. Canonical Correspondence Analysis detected positive relationships between temperature and salinity with egg abundance and larval distribution of Merluccius australis. The highest abundance of eggs of M. australis was found at ～6–10°C, mainly off south Guafo Island. Additionally, ichthyoplankton from the shelf-break area off south Patagonia showed a wider latitudinal distribution in the winter of 2014 than in 2013.     

Larval fish variability in response to oceanographic features in a nearshore nursery area

The influence of oceanographic features on ichthyoplankton assemblages in the warm temperate nearshore region of Algoa Bay, South Africa, was assessed. The nearshore ichthyoplankton comprised 88 taxa from 34 families. Samples were collected at six stations between August 2010 and July 2012 using a plankton ring net of 750 mm diameter and 500 µm mesh aperture. The majority of larvae collected were in a preflexion stage, indicating the potential importance of the nearshore for newly hatched larvae. Engraulidae dominated the catch (38·4%), followed by Cynoglossidae (28·1%) and Sparidae (8·4%). Larval fish abundance was highest during austral spring and summer (September to February). Unique patterns in responses of each dominant fish species to oceanographic features in the nearshore indicate the sensitivity of the early developmental stage to environmental variables. Using generalized linear models, ichthyoplankton abundance responded positively to upwelling and when warm water plumes originating from an Agulhas Current meander entered Algoa Bay. Highest abundances of Engraulis encrasicolus and Sardinops sagax were observed during Agulhas Plume intrusions into Algoa Bay. When a mixed and stratified water column persisted in the nearshore region of Algoa Bay, larval fish abundance decreased. The nearshore region of Algoa Bay appears to serve as a favourable environment for the accumulation of ichthyoplankton.     

State of the Ichthyoplankton Community along the Crimean Peninsula in August 2011

Data on species composition, spatial distribution of ichthyoplankton, and feeding of fish larvae in August 2011 are presented for the shelf and the open waters along the Crimean Peninsula from Kerch Strait to Karkinit Bay. In the ichthyoplankton, fish eggs and larvae represented 19 species from 16 families. The average egg abundance was 111 egg/m² and larvae abundance was 22 ind./m². The elimination ratio of the European anchovy Engraulis encrasicolus, which dominates in the plankton from the final stages of development to the prelarvae in 2011, was similar to that observed in 1957. The high number of larvae of the older age group in the western halistatic zone is explained by the peculiarities of the hydrological regime. Decrease in the pressure of predatory jelly macroplankton and an fodder zooplankton (zooplankton abundance) contribute to the survival of the fish larvae.     

中街山列岛海域鱼卵、仔稚鱼群落结构特征及其与环境因子的关系

为了解中街山列岛海域鱼卵仔稚鱼空间分布、种类组成及与环境因子的关系,于2010年5月—2012年2月在中街山列岛海域利用水平和垂直拖网开展了8个航次的鱼卵、仔稚鱼调查。运用非度量多维标度排序、聚类分析和典范对应分析(CCA)等方法对该海域鱼卵、仔稚鱼的空间分布进行了综合分析。结果表明:两年水平拖网共采集到鱼卵1783粒,仔稚鱼67尾;垂直拖网共采集到鱼卵576粒,仔稚鱼59尾。2010年平拖优势种为短吻红舌鳎(Cynoglossus joyneri),垂拖重要种为鲉形目未定种(Scorpaeniformes sp.)和扁舵鰹(Auxis thazard)。2011年平拖重要种为短吻红舌鳎、鰏属未定种(Leiognathuss sp.)、龙头鱼(Harpodon nehereus)和鳀(Engraulis japonicus);垂拖重要种为短吻红舌鳎、龙头鱼和中华小公鱼(Stolephorus chinensis)。经单因子相似性分析(ANOSIM),鱼卵仔稚鱼的优势种和重要种群落物种组成存在显著差异(P0.01)。研究结果表明,温度和盐度对鱼卵仔稚鱼的影响较大,夏季是中街山列岛海域鱼类产卵的重要时期。该海域以恋礁的小型底层鱼类为主,是褐菖鲉(Sebastiscus marmoratus)、龙头鱼等小型底层经济鱼类的重要产卵场和育幼场。     

长江口水域夏季鱼卵和仔稚鱼年间变化

基于2005年、2008年、2009年和2011年8月(夏季)在长江口水域(30°30'—31°45'N,121°15'—123°10'E)4个航次的浮游生物拖网资料,分析了长江口水域鱼卵和仔稚鱼的种类组成、数量分布特征及其年间变化。结果表明:4个航次采集的鱼卵和仔稚鱼鉴定到种的种类有17种,隶属于8目13科,以鲈形目种类最多,11种,其次是鲱形目,5种,其他各目种类均小于5种;种类数存在明显年间差异,2005年种类数最多(鱼卵3种,仔稚鱼8种),其次是2009年和2011年,2008年种类数最少(鱼卵1种,仔稚鱼5种)。优势种年间更替明显,长蛇鲻(Saurida elongata)、虾虎鱼(Gobiidae spp.)和中华小公鱼(Stolephorus chinensis)在2005年是优势种,2008年优势种为鳀鱼(Engraulis japonicus),2009年优势种为鳀鱼、寡鳞飘鱼(Pseudolaubuca engraulis)、虾虎鱼等,2011年虾虎鱼和小公鱼(包括小公鱼属未定种Stolephorus spp.和中华小公鱼Stolephorus chinensis)成为优势种。2005年鱼卵和仔稚鱼数量分布的密集区在嵊泗列岛附近水域,2008年鱼卵和仔稚鱼出现较少,未出现明显的数量密集区;2009年鱼卵数量较少,仔稚鱼数量较多,密集区主要分布在在长江口以外123°E附近水域;2011年鱼卵主要分布在在长江北支口门外附近水域,仔稚鱼在调查区内分布相对均匀。     

Spatial and Temporal Patterns of Diversity and Distribution of the Upper Juruá River Fish Community (Brazilian Amazon)

We studied spatial and temporal patterns in fish species composition and diversity at the upper Juruá River located in the west Brazilian Amazon. We collected with gillnet 822 fishes belonging to 90 species in the main Juruá River, its tributaries and the floodplain lakes during wet and dry seasons. Fish abundance and species richness were greater in the dry season. During that season, fishes may be concentrated due to the low water level, being caught more easily by gillnets. There has been a trend towards a greater fish biomass caught in lakes. This might be associated with a greater environmental stability as lakes may be less subject to large variations in water level. The fish communities differed between the two seasons and between lakes and the lotic environments (main river and tributaries). Fish species from the family Curimatidae were most abundant in the lakes, while Pimelodus spp. and Hypostomus spp. predominated in the main Juruá River. Seasonal variations in fish communities may be related to differences in the migratory behavior among fish species. Such spatial and temporal patterns influencing fish community structure at the Upper Juruá Extractive Reserve must be accounted for in management and conservation strategies.