施用拮抗菌饼肥发酵液和土壤消毒剂对香蕉枯萎病病区土壤细菌群落的影响

【目的】探明施用拮抗菌饼肥发酵液与土壤消毒剂对香蕉枯萎病的防控效果及对土壤微生物的影响。【方法】在大田栽培条件下,采用Biolog和T-RFLP的方法研究了各处理在不同时期土壤微生物细菌的功能多样性及群落特征。【结果】结果表明,施用拮抗菌饼肥发酵液和土壤消毒剂均显著降低了香蕉枯萎病的病情指数,以两者配合施用防病效果最高,达60.82%。Biolog Eco微平板研究发现,施用拮抗菌饼肥发酵液可提高土壤微生物的AWCD及种群均匀度,施用土壤消毒剂显著降低了土壤微生物种群的丰富度和均匀度;主成分分析表明,土壤微生物利用碳源的种类在香蕉整个生长季呈增加的趋势,其前期主要利用碳源为氨基酸类、羧酸类、双亲化合物、糖类,后期主要增加了羧酸类和双亲化合物类碳源。T-RFLP分析土壤细菌多样性发现,施用拮抗菌饼肥发酵液处理的细菌TRFs片段最高,分析优势种群发现,增加的种类主要有黄秆菌属(Flavobacterium)、假单胞菌属(Pseudomonas)、乳酸秆菌(Lactobacillus)等。【结论】拮抗菌饼肥发酵液配合土壤消毒剂施用,可在降低土壤中病原菌的基础上,增加土壤拮抗微生物的种类,提高土壤微生物细菌的多样性,改善土壤微生物生态结构,最终达到提高香蕉枯萎病防病效果的目的。     

连续施肥对农田黑土微生物功能多样性的影响

应用Biolog Eco微平板培养法研究了中国科学院海伦农业生态试验站20余年连续不同施肥处理(对照、氮磷钾、氮磷钾+秸秆、氮磷钾+猪粪1、氮磷钾+猪粪2和氮磷钾+猪粪3)下土壤微生物代谢功能多样性的变化。结果表明:长期施肥条件下,单施化肥和有机肥与化肥配施对土壤细菌、真菌数量影响不明显,但高量有机肥与化肥配施可以显著增加放线菌数量。Biolog结果表明,施用有机肥的平均颜色变化率高于单施化肥和对照。Shannon指数、Simpson指数和McIntosh指数均是有机肥和化肥配施高于化肥单施与对照。主成分分析结果表明,对照、NPK与其他几种处理有较明显的距离,说明有机肥的连年施用导致了土壤微生物代谢功能多样性的变化。     

施氮水平对蚕豆枯萎病和根际微生物代谢功能多样性的影响

研究不同氮肥用量对蚕豆根际微生物功能多样性的影响及其与蚕豆枯萎病发生的关系.通过田间小区试验,采用Biolog微平板分析法研究了4个施氮水平N₀(0 kg·hm-2)、N₁(56.25 kg·hm^-2)、N₂(112.5 kg·hm^-2)和N₃(168.75 kg·hm^-2)对蚕豆枯萎病危害和根际微生物代谢功能多样性的影响.结果表明： 施氮(N₁、N₂、N₃)处理显著降低了蚕豆枯萎病的病情指数和根际镰刀菌的数量,显著增加了蚕豆根际的细菌、放线菌数量、细菌/真菌和放线菌/真菌.其中N₂处理蚕豆枯萎病病情指数和镰刀菌数量最低,而细菌、放线菌数量、细菌/真菌和放线菌/真菌最高.与N₀处理相比,N₁、N₂、N₃处理均提高了根际微生物群落碳源利用率(AWCD),但对6类碳源的利用存在一定的差异.不同施氮水平下根际微生物群落对糖类、羧酸类和氨基酸类碳源利用程度较高.主成分分析表明,施氮明显改变了蚕豆根际微生物群落结构,糖类、羧酸类和氨基酸类碳源是区分施氮导致土壤微生物群落变化的敏感碳源.施氮抑制了根际微生物对部分糖类和羧酸类碳源的利用,而提高了对氨基酸和酚酸类碳源的利用,这可能是施氮减轻蚕豆枯萎病危害的重要原因之一.适量施氮能增加根际细菌、放线菌数量,改变微生物代谢功能,降低病原菌数量,是抑制蚕豆枯萎病发生的有效措施.     

减施化肥配施有机肥对荔枝园土壤微生物区系的影响

有机肥替代部分化肥对荔枝生产有提质增效作用。为进一步探讨荔枝土壤微生物学机制,本试验以19年生“妃子笑”荔枝为对象,以化肥处理(CF)为对照,研究2018—2020连续两年减施化肥(平均减施化肥总养分21.5%)配施羊粪(OF)和配施生物有机肥处理(BIO)对土壤微生物多样性、群落组成及差异微生物等的影响,为荔枝科学施肥提供理论指导。结果表明: 与CF相比,连续两年OF和BIO处理均可有效提高荔枝产量和品质,产量平均增幅分别为23.1%和39.0%。土壤有机质含量和pH值均明显提高,土壤有效磷、有效钾、有效钙、有效镁、有效铁、有效锰、有效铜和有效锌含量均有不同程度增加。施用两种有机肥均能提高根际土壤细菌和真菌多样性,对非根际土壤影响不明显,同时改变土壤微生物群落结构,增加拟杆菌门、变形菌门和芽单胞菌门等富营养型细菌类群,减少酸杆菌门、绿弯菌门等贫营养型细菌类群。与CF相比,OF处理下MND1属和BIO处理下TK10属、芽单胞菌属、黄色杆菌属、木霉属、毛匍孢霉属的相对丰度均显著提高,并与产量呈显著正相关关系。综上,在荔枝上连续两年采用有机肥替代部分化肥可有效提高土壤pH值和养分有效性,增加根际土壤微生物丰富度和多样性,改变土壤微生物群落结构,从而形成更有利于产量提高和品质提升的微生物区系。     

盐爪爪根部微生物分布特征及盐浓度对碳源代谢分析的影响

【背景】耐盐植物盐爪爪广泛分布于盐碱荒漠区域,其根际存在明显的盐离子富集,形成"盐岛效应",研究此过程中微生物如何演替和适应,对揭示盐爪爪根际微生物的分布及其耐盐特性、"盐岛"的形成具有重要科学意义。【目的】揭示盐爪爪根际、根区及其周围环境土壤中微生物分布特征,确定不同盐浓度处理对根际微生物Biolog Eco微平板碳源代谢多样性的影响。【方法】采用Biolog Eco微平板技术,对采自新疆和硕地区的盐爪爪根际、根区和环境土壤微生物碳源利用情况进行分析,并采用不同浓度NaCl溶液对盐爪爪根际土壤样品进行稀释加样,评估盐浓度对根际微生物活性及多样性分析的影响。【结果】样品微生物代谢活性总体呈现根际根区环境的趋势;随着与根部距离的增加,样品中利用氨基酸、胺类碳源微生物所占比例明显降低,而利用吐温和肝糖等多聚化合物类碳源微生物所占比例明显增加;多样性分析表明,随着与根部距离的增加,Shannon指数(H)随之降低且存在明显差异。不同浓度NaCl溶液对采用BiologEco微平板技术分析盐爪爪根际微生物的代谢活性和代谢多样性有着明显的影响,其中采用5%NaCl溶液作为稀释加样液的根际微生物活性最高。【结论】盐爪爪根部微生物组成和分布有着明显的演变规律,且采用Biolog Eco微平板技术分析微生物代谢多样性时需进行培养条件的优化。     

对枯萎病不同抗性的香蕉品种的内生细菌多样性及群落结构

【目的】了解抗感品种香蕉植株中内生细菌与香蕉枯萎病间的关系,从而为香蕉枯萎病的发生与防控提供一定的理论基础。【方法】通过基于16S rRNA的末端标记限制性片段长度多态性技术(Terminal restriction fragment length polymorphism,T-RFLP)分析健康和感枯萎病香蕉植株不同品种各组织,以及香蕉植株不同发病时间根组织中内生细菌的多样性和群落结构。【结果】抗病品种"农科一号"植株根、假茎、叶片各组织中内生细菌的种类基本都比感病品种"巴西蕉"的相应组织中的要丰富。感枯萎病香蕉植株根、假茎、叶片各组织中内生细菌种类基本都比健康植株各组织的丰富。在植株发病前、发病初期、再到发病后一个月的不同时期,对于抗病品种而言,其内生细菌的多样性都基本保持稳定,而感病品种则变化幅度较大。同时发现不同品种不同组织的内生细菌的优势种群有所不同,且不同品种健康和发病植株都存在一些特有优势种群。【结论】香蕉抗病品种比感病品种植株中内生细菌的多样性更丰富且更稳定;感枯萎病植株中的内生细菌种类比健康的丰富;而且不同抗性品种中健康和感病植株内的优势种群存在明显差异。     

不同香蕉枯萎病区土壤细菌群落多样性

分别采集海南省临高县3个地区的香蕉枯萎病发病土壤与健康土壤样品共6份,采用常规方法测定土壤理化性质,以末端限制性片段多态性分析(T-RFLP)技术研究不同地区发病与健康土壤微生物的多样性,并分析土壤微生物群落结构与土壤因子的关系.结果表明:同一地区发病蕉园土壤的大部分理化性质指标低于健康蕉园,以pH、有效P含量的差异最显著;T-RFLP结果表明供试蕉园发病土壤的细菌多样性比健康土壤丰富;3个地区的优势种分别为片段长度为144、147与233 bp的T-RFs,通过系统发育分配工具比对,推断这3个地区的优势菌群可能属于枯草芽孢杆菌、葡萄球菌、反刍真杆菌;大部分T-RFs的分布与土壤碱解N、pH、速效K、有效P及含水量有关,且在发病土壤中的相对丰度大于健康土壤.     

生物有机肥对连作蕉园香蕉生产和土壤可培养微生物区系的影响

以连续种植香蕉12年的枯萎病高发病蕉园为试验点,通过平板计数和可培养微生物群落变性凝胶电泳(CD PCR-DGGE)等方法研究田间条件下连续两年施用化肥、牛粪、猪粪和生物有机肥对香蕉枯萎病的抑制作用,以及对香蕉产量、品质和土壤中可培养微生物区系的影响.结果表明:相比于其他处理,连续两年施用生物有机肥能够有效降低香蕉枯萎病发病率,显著提高大田香蕉单株质量、小区产量、果实可溶性糖含量及可溶性糖与可滴定酸的比值(糖酸比).可培养微生物区系分析结果表明,施用生物有机肥能够显著提高土壤微生物生物量,增加可培养细菌、芽孢杆菌和放线菌数量及细菌与真菌比值,降低尖孢镰刀菌数量.CD PCR-DGGE聚类分析表明,连续两年施用生物有机肥明显改变了土壤可培养细菌群落结构,增加了其丰度和多样性.切胶测序结果表明,连续两年施用生物有机肥的香蕉园土壤增加了类芽孢杆菌、伯克氏菌、未培养疣微菌及Bacillus aryabhattai的丰度,降低了青枯菌、粘金黄杆菌、Fluviicola taffensis、肠杆菌及巨大芽孢杆菌的丰度.表明连续施用生物有机肥能够优化连作蕉园土壤可培养微生物群落结构,防控香蕉枯萎病的发生,提高香蕉产量并改善果实品质.     

化肥减量配施腐植酸生物肥对土壤生物学性质和玉米干物质量的影响

降低化肥施用量、提高肥料利用率是稳定粮食产量、缓解黑土退化的有效途径。本研究以玉米为对象,采用2年室内盆栽试验,设置化肥减量配施腐植酸生物肥4个处理[T₀:不施肥;T₁:常规化肥用量;T₂:化肥减量15%配施腐植酸生物肥(400 kg·hm^-2);T₃:化肥减量30%配施腐植酸生物肥(600 kg·hm^-2)],研究腐植酸生物肥对土壤微生物数量、酶活性和养分含量的影响,以明确退化黑土对腐植酸生物肥的响应,为黑土土壤保护提供参考。结果表明: 与单施化肥相比,腐植酸生物肥的施用显著增加了土壤细菌和真菌数量,菌群数量随着腐植酸生物肥用量的增加而增加。与T₁处理相比,T₂处理可显著提高土壤脲酶、蔗糖酶和过氧化氢酶活性,玉米抽雄期以后脲酶、蔗糖酶和过氧化氢酶活性分别显著增加了11.4%～21.6%、34.9%～46.7%和6.5%～13.4%。T₂、T₃处理土壤碱解氮含量较T₁处理升高了8.2%～18.1%,保障了抽雄期后土壤的供氮能力;土壤有效磷和速效钾含量分别较T₁处理显著增加了17.1%～121.0%和9.6%～57.3%,随着腐植酸生物肥用量的增加,土壤磷素和钾素活化效果更显著。与T₁处理相比,T₂、T₃处理玉米单株干物质量显著增加。可见,施用腐植酸生物肥增加了土壤细菌和真菌的数量,提高了过氧化氢酶、脲酶、蔗糖酶活性和土壤养分含量,增加了玉米单株干物质量。本试验条件下常规化肥减量15%配施400 kg·hm^-2腐植酸生物肥是黑土玉米生产最适宜的养分管理策略。     

玉米连作及其施肥对土壤微生物群落功能多样性的影响

采用Biolog技术,借助吉林农业大学1984年建立的长期定位试验,以撂荒和非玉米连作(当季作物为芸豆)为对照,研究玉米连作及其不同施肥措施对土壤微生物功能多样性的影响。结果表明,反映土壤微生物活性的平均颜色变化率(AWCD)呈现出以下变化规律:撂荒(UC)非玉米连作(NCC)玉米连作不施肥(CK);玉米连作配施秸秆(S、SN、SNPK)玉米连作配施NPK(NPK)玉米连作不施肥(CK)玉米连作单施N(N)。微生物培养72h活性旺盛,各处理AWCD在0.395—0.732之间,其中撂荒AWCD显著高于非玉米连作和玉米连作不施肥(P0.05);玉米连作配施秸秆明显提高微生物活性,玉米连作配施秸秆(S、SN、SNPK)AWCD是玉米连作不施肥和单施化肥(N、NPK)的1.26—1.62倍。玉米连作不施肥土壤微生物群落多样性指数(H、E、S)低于撂荒处理,但高于非玉米连作处理,非玉米连作提高了土壤微生物优势度指数。玉米连作配施秸秆土壤微生物物种丰富度指数和均匀度指数高于玉米连作不施肥和玉米连作施化肥,玉米连作单施氮肥优势度指数较高,其它多样性指数降低。主成分分析结果表明,不同处理土壤微生物碳源利用特征出现分异:撂荒和玉米连作配施秸秆处理集中在第1主成分正方向,得分系数在2.39—4.17之间,土壤微生物碳源利用特征相似;玉米连作不施肥、玉米连作单施化肥和非玉米连作处理分布在第1主成分负方向,得分系数在-5.43—-1.59之间。土壤微生物利用的碳源主要是糖类、羧酸类、氨基酸和聚合物。玉米连作配施秸秆和撂荒有利于提高土壤微生物代谢活性和土壤微生物群落功能多样性,玉米连作单施化肥尤其单施氮肥土壤微生物活性和功能多样性下降。     

Development of a Real-Time Fluorescence Loop-Mediated Isothermal Amplification Assay for Rapid and Quantitative Detection of Fusarium oxysporum f. sp. cubense Tropical Race 4 In Soil

Fusarium oxysporum f. sp. cubense (Foc), the causal agent of Fusarium wilt (Panama disease), is one of the most devastating diseases of banana (Musa spp.). The Foc tropical race 4 (TR4) is currently known as a major concern in global banana production. No effective resistance is known in Musa to Foc, and no effective measures for controlling Foc once banana plants have been infected in place. Early and accurate detection of Foc TR4 is essential to protect banana industry and guide banana planting. A real-time fluorescence loop-mediated isothermal amplification assay (RealAmp) was developed for the rapid and quantitative detection of Foc TR4 in soil. The detection limit of the RealAmp assay was approximately 0.4 pg/µl plasmid DNA when mixed with extracted soil DNA or 10³ spores/g of artificial infested soil, and no cross-reaction with other relative pathogens were observed. The RealAmp assay for quantifying genomic DNA of TR4 was confirmed by testing both artificially and naturally infested samples. Quantification of the soil-borne pathogen DNA of Foc TR4 in naturally infested samples was no significant difference compared to classic real-time PCR (P>0.05). Additionally, RealAmp assay was visual with an improved closed-tube visual detection system by adding SYBR Green I fluorescent dye to the inside of the lid prior to amplification, which avoided the inhibitory effects of the stain on DNA amplification and makes the assay more convenient in the field and could thus become a simple, rapid and effective technique that has potential as an alternative tool for the detection and monitoring of Foc TR4 in field, which would be a routine DNA-based testing service for the soil-borne pathogen in South China.     

Occurrence and correlations of nematodes,Fusarium oxysporum and edaphic factors on banana plantations

Problems caused by nematodes and Fusarium wilt (Panama disease) on banana plantations are responsible for yield losses and are limiting to its cultivation. In the state of Goias, there is little information about the nematode occurence on this crop, and its relation with the incidence of Fusarium oxysporum f.sp. cubense (Foc). This research had the purpose to identify the occurrence of plant‐parasitic nematodes on banana plantations and to verify its correlation with the Fusarium wilt and with the soil attributes (pH, texture, nutrients). Twelve banana orchards in the state of Goias were sampled in the municipalities of Anapolis, Caiaponia, Goiatuba, Itaguaru, Itumbiara (two areas), Jatai, Morrinhos, Ouro Verde, Palestina, Taquaral and Uruana. All sampled areas, except Morrinhos, revealed contamination with Foc, and all areas had different genera of nematodes either in the soil or in the roots samples. Meloidogyne sp., Helicotylenchus sp. and Rotylenchus sp. were the main genera of plant‐parasitic nematodes found in the samples, with Meloidogyne sp. and Rotylenchus sp. being the most dominant and abundant genera. The presence of Pratylenchus sp. increases the population levels of F. oxysporum. Helicotylenchus sp. is highly correlated with high concentrations of Mn. High population density of Meloidogyne sp. was found in irrigated areas with low concentrations of P, Ca, Mg and soil pH.     

Combined application of botanical formulations and biocontrol agents for the management of Fusarium oxysporum f. sp. cubense (Foc) causing Fusarium wilt in banana

Plant products along with biocontrol agents were tested against Fusarium wilt of banana caused by Fusarium oxysporum f. sp. cubense (Foc). Of the 22 plant species tested, the leaf extract of Datura metel (10%) showed complete inhibition of the mycelial growth of Foc. Two botanical fungicides, Wanis 20 EC and Damet 50 EC along with selected PGPR strains with known biocontrol activity, Pseudomonas fluorescens 1, Pf1 and Bacillus subtilis, TRC 54 were tested individually and in combination for the management of Fusarium wilt under greenhouse and field conditions. Combined application of botanical formulation and biocontrol agents (Wanis 20 EC + Pf1 + TRC 54) reduced the wilt incidence significantly under greenhouse (64%) and field conditions (75%). Reduction in disease incidence was positively correlated with the induction of defense-related enzymes peroxidase (PO) and polyphenol oxidase (PPO). Three antifungal compounds (two glycosides and one ester) in D. metel were separated and identified using TLC, RP-HPLC (Reverse Phase-High Pressure Liquid Chromatography) and mass spectrometry. In this study it is clear that combined application of botanical formulations and biocontrol agents can be very effective in the management of Fusarium wilt of banana.     

Effect of the combination of bio-organic fertiliser with Bacillus amyloliquefaciens NJN-6 on the control of banana Fusarium wilt disease,crop production and banana rhizosphere culturable microflora

Soil amended with organic amendments has been suggested to be a strategy for managing the Fusarium wilt disease which severely hindered the banana production. The effects of four fertilisation regimes, including chemical fertiliser, manure composts and bio-organic fertiliser (BIO) containing Bacillus amyloliquefaciens NJN-6 for 2-year continuous application on the banana Fusarium wilt disease incidence, crop yield and rhizosphere culturable microbial community were investigated. To explore the soil microflora, plate counting method, in vitro screening method for antagonism, eco-physiological index and culture-dependent denaturing gradient gel electrophoresis method (CD DGGE) were used. The highest banana yield, culturable bacteria, actinobacteria and Bacillus populations, culturable bacteria to fungi (B/F) value, antagonistic Bacillus ratio and lowest Fusarium wilt disease incidence were observed in the BIO treatment. Based on CD DGGE results, the BIO application significantly altered the soil bacteria structure and showed highest richness and diversity. The phylogenetic analysis of the selected bands showed that the most abundant phyla were Proteobacteria and Bacteroidetes and BIO application enriched the genera Comamonas, Chitinophaga, the species Bacillus flexus and uncultured Bacillus. All the results showed that 2-year continuous application of BIO containing B. amyloliquefaciens NJN-6 more effectively controlled Fusarium wilt disease and improved fruit yields under field conditions and modulated banana rhizosphere microflora.     

Development of DArT markers and assessment of diversity in Fusarium oxysporum f. sp. ciceris,wilt pathogen of chickpea (Cicer arietinum L.)

Background

Fusarium oxysporum f. sp. ciceris (Foc), the causal agent of Fusarium wilt of chickpea is highly variable and frequent recurrence of virulent forms have affected chickpea production and exhausted valuable genetic resources. The severity and yield losses of Fusarium wilt differ from place to place owing to existence of physiological races among isolates. Diversity study of fungal population associated with a disease plays a major role in understanding and devising better disease control strategies. The advantages of using molecular markers to understand the distribution of genetic diversity in Foc populations is well understood. The recent development of Diversity Arrays Technology (DArT) offers new possibilities to study the diversity in pathogen population. In this study, we developed DArT markers for Foc population, analysed the genetic diversity existing within and among Foc isolates, compared the genotypic and phenotypic diversity and infer the race scenario of Foc in India.

Results

We report the successful development of DArT markers for Foc and their utility in genotyping of Foc collections representing five chickpea growing agro-ecological zones of India. The DArT arrays revealed a total 1,813 polymorphic markers with an average genotyping call rate of 91.16% and a scoring reproducibility of 100%. Cluster analysis, principal coordinate analysis and population structure indicated that the different isolates of Foc were partially classified based on geographical source. Diversity in Foc population was compared with the phenotypic variability and it was found that DArT markers were able to group the isolates consistent with its virulence group. A number of race-specific unique and rare alleles were also detected.

Conclusion

The present study generated significant information in terms of pathogenic and genetic diversity of Foc which could be used further for development and deployment of region-specific resistant cultivars of chickpea. The DArT markers were proved to be a powerful diagnostic tool to study the genotypic diversity in Foc. The high number of DArT markers allowed a greater resolution of genetic differences among isolates and enabled us to examine the extent of diversity in the Foc population present in India, as well as provided support to know the changing race scenario in Foc population.

Electronic supplementary material

The online version of this article (doi: 10.1186/1471-2164-15-454) contains supplementary material, which is available to authorized users.     

Land use intensification affects soil microbial populations, functional diversity and related suppressiveness of cucumber Fusarium wilt in China’s Yangtze River Delta

The extent of soil microbial diversity in agricultural soils is critical to the maintenance of soil health and quality. The aim of this study was to investigate the influence of land use intensification on soil microbial diversity and thus the level of soil suppressiveness of cucumber Fusarium wilt. We examined three typical microbial populations, Bacillus spp., Pseudomonas spp. and Fuasarium oxysporum, and bacterial functional diversity in soils from three different land use types in China’s Yangtze River Delta, and related those to suppressiveness of cucumber Fusarium wilt. The land use types were a traditional rice wheat (or rape) rotation land, an open field vegetable land, and a polytunnel greenhouse vegetable land that had been transformed from the above two land use types since 1995. Results generated from the field soils showed similar counts for Bacillus spp. (log 5.87–6.01 CFU g⁻¹ dw soil) among the three soils of different land use types, significantly lower counts for Pseudomonas spp. (log 5.44 CFU g⁻¹ dw soil) in the polytunnel greenhouse vegetable land whilst significantly lower counts for Fusarium oxysporum (log 3.21 CFU g⁻¹ dw soil) in the traditional rice wheat (or rape) rotation land. A significant lower dehydrogenase activity (33.56 mg TPF kg⁻¹ dw day⁻¹) was observed in the polytunnel greenhouse vegetable land. Community level physiological profiles (CLPP) of the bacterial communities in soils showed that the average well color development (AWCD) and three functional diversity indices of Shannon index (H′), Simpson index (D) and McIntosh index (U) at 96 h incubation in BIOLOG Eco Micro plates were significantly lower in the polytunnel greenhouse vegetable land than in both the traditional rice wheat (or rape) rotation land and the open field vegetable land. A further greenhouse experiment with the air-dried and sieved soils displayed significantly lower plant growth parameters of 10-old cucumber seedlings as well as significantly lower biomass and total fresh fruit yield at the end of harvesting at day 70 in the polytunnel greenhouse vegetable soil sources. The percentages of Fusarium wilt plant death were greatly increased in the polytunnel greenhouse vegetable plants, irrespective of being inoculated with or without Fusarium oxysporum f. sp. cucumerinum. Our results could provide a better understanding of the effects of land use intensification on soil microbial population and functional diversity as well as the level of soil suppressiveness of cucumber Fusarium wilt.     

香蕉植株根区土壤的真菌多样性分析

尖孢镰孢菌古巴专化型(Fusarium oxysporum f.sp.cubense)是香蕉枯萎病的病原菌,该菌是一种土壤习居菌,了解香蕉根区土壤中真菌多样性及镰孢菌属(Fusarium)真菌所占比例,对如何减少土壤中的病原菌、预防香蕉枯萎病的发生有重要的指导意义。该文通过采集不同宿根年限的香蕉健康植株和枯萎病植株的根区土壤,利用高通量测序技术测定土壤样品中的真菌种群。结果表明:(1)同一宿根年限的香蕉植株中,健康植株根区土壤中所获的reads及OTUs数量均高于枯萎病植株,说明健康植株根区土壤的真菌多样性丰富于枯萎病植株。(2)除了一年生香蕉枯萎病植株以担子菌门(Basidiomycota)为主外,其他土壤样品中均以子囊菌门(Ascomycota)为主,其中的丛赤壳科最高相对丰度来自三年生健康植株的根区土壤(26.02%),其次是五年生的枯萎病植株根区土壤(15.56%)。(3)在丛赤壳科中,镰孢菌属在三年生健康植株土壤中的相对丰度最高(2.54%),在其他样品中的相对丰度在0.1%～0.65%之间;在镰孢菌属中,腐皮镰孢菌(Fusarium solani)的相对丰度(0～1.59%之间)高于尖孢镰孢菌(F.oxysporum),尖孢镰孢菌仅占很小的比例(相对丰度0～0.08%之间)。可见,在不同香蕉植株的根区土壤中,健康植株的根区土壤真菌多样性高于枯萎病植株,无论是健康植株还是枯萎病植株的根区土壤中,作为香蕉枯萎病病原菌的镰孢菌属或尖孢镰孢菌的群体均不占主导地位。