Are Bacteria Omnipresent on Phanerochaete chrysosporium Burdsall?

Cultures of Phanerochaete chrysosporium were examined for the presence of bacteria as previously described (F. Seigle-Murandi, P. Guiraud, C. Falsen, and K.-E. Eriksson, Appl. Environ. Microbiol. 62:2477-2481, 1996). Under no conditions could bacteria be isolated from cultures of P. chrysosporium. With PCR primers corresponding to small-subunit rRNA genes, no bacterium-like product could be amplified from cultures of the widely used P. chrysosporium strain BKM-F-1767. Thus, we could find no evidence of bacteria in association with P. chrysosporium BKM-F-1767.     

Pyranose 2-oxidase from Phanerochaete chrysosporium– further biochemical characterisation

Pyranose 2-oxidase (P2O) was purified 43-fold to apparent homogeneity from the basidiomycete Phanerochaete chrysosporium using liquid chromatography on phenyl Sepharose, Mono Q (twice) and phenyl Superose. The native enzyme has a molecular mass of about 250 kDa (based on native PAGE) and is composed of four identical subunits of 65 kDa. It contains three isoforms of isoelectric point (pI) 5.0, 5.05 and 5.15 and does not appear to be a glycoprotein. P2O is optimally stable at pH 8.0 and up to 60 °C. It is active over a broad pH range (5.0–9.0) with maximum activity at pH 8.0–8.5 and at 55 °C, and a broad substrate specificity. d-Glucose is the preferred substrate, but 1-β-aurothioglucose, 6-deoxy-d-glucose, l-sorbose, d-xylose, 5-thioglucose, d-glucono-1,5-lactone, maltose and 2-deoxy-d-glucose are also oxidised at relatively high rates. A Ping Pong Bi Bi mechanism was demonstrated for the P2O reaction at pH 8.0, with a catalytic constant (k _cat) of 111.0 s⁻¹ and an affinity constant (K _m) of 1.43 mM for d-glucose and 83.2 μM for oxygen. Whereas the steady-state kinetics for glucose oxidation were unaffected by the medium at pH ≥ 7.0, at low pH both pH and buffer composition affected the P2O kinetics with the k _cat/K _m value decreasing with decreasing pH. The greatest effect was observed in acetate buffer (0.1 M, pH 4.5), where the k _cat decreased to 60.9 s⁻¹ and the K _m increased to 240 mM. The activity of P2O was completely inhibited by 10 mM HgCl₂, AgNO₃ and ZnCl₂, and 50% by lead acetate, CuCl₂ and MnCl₂. Received: 28 August 1996 / Received revision: 25 November 1996 / Accepted: 29 November 1996     

Is cellobiose dehydrogenase from Phanerochaete chrysosporium a lignin degrading enzyme?

Cellobiose dehydrogenase (CDH) is an extracellular redox enzyme of ping-pong type, i.e. it has separate oxidative and reductive half reactions. Several wood degrading fungi produce CDH, but the biological function of the enzyme is not known with certainty. It can, however, indirectly generate hydroxyl radicals by reducing Fe(3+) to Fe(2+) and O2 to H2O2. Hydroxyl radicals are then generated by a Fenton type reaction and they can react with various wood compounds, including lignin. In this work we study the effect of CDH on a non-phenolic lignin model compound (3,4-dimethoxyphenyl glycol). The results indicate that CDH can affect lignins in three important ways. (1) It breaks beta-ethers; (2) it demethoxylates aromatic structures in lignins; (3) it introduces hydroxyl groups in non-phenolic lignins. The gamma-irradiated model compound gave a similar pattern of products as the CDH treated model compound, when the samples were analyzed by HPLC, suggesting that hydroxyl radicals are the active component of the CDH system.     

Comparison of alginate and “Pesta” for formulation of Phanerochaete chrysosporium

Summary Alginate and wheat gluten (Pesta) matrices were compared for the encapsulation of the white rot fungus Phanerochaete chrysosporium. Pesta granules were not successful for formulating P. chrysosporium although control granules made with Alternaria alternata yielded viable fungal colonies; the gluten in wheat flour apparently inhibits growth of the white rot fungus. P. chrysosporium formulated in alginate with corncob grits or sawdust, and stored at room temperature, yielded over 50% viability of encapsulated mycelia after six months. Alginate encapsulation offers a promising technology for the delivery of white rot fungi to toxic waste sites.     

Optimization of cellobiose dehydrogenase and β-glucosidase production by cellulose-degrading cultures of Phanerochaete chrysosporium

The effect of succinate, acetate, and phosphate on the production of cellobiose dehydrogenase (CDH), cellobiose: quinone oxidoreductase (CBQase), -glucosidase, and protease by Phanerochaete chrysosporium in media containing cotton linters, filterpaper, microcrystalline cellulose, or acid-treated cellulose was investigated. The succinate medium,with an initial pH of 4.5 and with cotton linters as the cellulose source, has been demonstrated to yield the highest levels of CDH (141 U/l) and -glucosidase (237 U/l), and the lowest levels of CBQase (53 U/l). The optimized culture conditions identified here permit isolation of milligram quantities of CDH and -glucosidase from P. chrysosporium.     

NaCl对黄孢原毛平革菌(Phanerochaete chrysosporium)的损伤效应

染料中含有大最NaCl是影响黄孢原毛平革菌脱色效率的重要因素。为研究NaCl对黄孢原毛平革菌处理功能的影响,分别采用孢子和菌丝球与不同浓度的NaCl混合培养10d,以观察孢子生长和菌丝球的损伤效应,并利用透射电子显微镜和AFLP法对其进行细胞结构分析与DNA扩增,通过分析不同浓度NaCl对其生长及微观结构的影响、NaCl浓度与DNA相似性关系以及构建UPGMA相似性树状图等方法,评价NaCl对P.chrysosporium结构与功能的损伤效应。结果显示,3％NaCl对黄孢原毛平革菌影响较小,细胞结构保持完整,异常细胞量为14．2％,DNA变异率小,与空白的相似度达90％以上,表明黄孢原毛平革菌在3％的浓度范围内结构功能基本不受影响;5％NaCl使DNA相似度下降为71．4％,下降幅度最为显著,并且细胞内含物松散和出现胞浆空泡化趋势,异常细胞占有量为71．1％,说明3％～5％的浓度范围最易对P．chrysosporium的结构与功能产生不良影响;NaCl浓度≥8％可对黄孢原毛平革菌产生严重损伤,细胞变形严重,空泡化,DNA相似度降至67％以下,异常细胞量约90％,表明此浓度范围可使黄孢原毛平革菌基本丧失了原有的结构与功能。     

Alkyl-phenyl cleavage of the lignin model compounds guaiacylglycol and glycerol-β-guaiacyl ether by Phanerochaete chrysosporium

The white rot basidiomycete Phanerochaete chrysosporium metabolized guaiacylglycol--guaiacyl ether (I) in high nitrogen, shaking and stationary cultures. 2-(o-Methoxyphenoxy) ethanol (X), 2-(o-methoxyphenoxy) acetic acid (IX) and methoxy-phydroquinone (MHQ) were identified as products of the metabolism of (I). P. chrysosporium also metabolized guaiacylglycerol--guaiacyl ether (IV) in high nitrogen stationary cultures. 2-(o-Methoxyphenoxy)-1,3 propanediol (XII) and 3-hydroxy, 2-(o-methoxy-phenyxy) propionic acid (XIV) were identified as products of the metabolism of (IV). Finally, P. chrysosporium metabolized -deoxyguaiacylglycol--guaiacyl ether (VI) and -deoxyguaiacylglycerol--guaiacyl ether (VII) in limiting nitrogen cultures. 2-(o-Methoxyphenoxy) ethanol (X) and 2-(o-methoxyphenoxy)-1,3 propanediol (XII) were identified as products of the metabolism of VI and VII respectively indicating hydroxylation of those substrates with subsequent alkyl-phenyl bond cleavage. Metabolites were identified after comparison with chemically synthesized standards by GLC-mass spectrometry.Abbreviations GLC Gas liquid chromatography - TMSi trimethylsilyl - TLC thin layer chromatography - MHQ methoxyhydroquinone     

Recombinant expression,characterization, and pulp prebleaching property of a Phanerochaete chrysosporium endo-β-1,4-mannanase

A Phanerochaete chrysosporium cDNA predicted to encode endo-1,4-β-d-mannanase, man5D, was cloned and expressed in Aspergillus niger. The coding region of the gene man5D was predicted to contain, in order from the N-terminal: a secretory signal peptide, cellulose-binding domain, linker region, and glycosyl hydrolase family 5 catalytic site. The enzyme was purified from culture filtrate of A. niger transformants that carried the recombinant man5D. Recombinant Man5D had an apparent molecular size of about 65 kDa by SDS-PAGE, and optimal activity at pH 4.0–6.0 and 60 °C. It was stable from pH 4.0 to 8.0 and up to 60 °C. The enzyme showed affinity for Avicel cellulose, suggesting that the predicted cellulose-binding domain is biologically functional. The specific activities of Man5D on mannan, galactomannan, and glucomannan at pH 5 and 60 °C ranged from 160 to 460 μmol/(min mg), with apparent K_m values from 0.54 to 2.3 mg/mL. Product analysis results indicated that Man5D catalyzes endo-cleavage, and appears to have substantial transglycosylase activity. When used to treat softwood kraft pulp, Man5D hydrolyzed mainly glucomannan and exhibited a positive effect as a prebleaching agent. Compared to a commercial prebleaching with xylanase, the prebleaching effect of Man5D was weaker but with reduced loss of fibre yield as determined by the release of solubilized sugars.     

Atypical Biosynthetic Properties of a Δ12/ν+3 Desaturase from the Model Basidiomycete Phanerochaete chrysosporium

The model white-rot basidiomycete Phanerochaete chrysosporium contains a single integral membrane Δ¹²-desaturase FAD2 related to the endoplasmic reticular plant FAD2 enzymes. The fungal fad2-like gene was cloned and distinguished itself from plant homologs by the presence of four introns and a significantly larger coding region. The coding sequence exhibits ca. 35% sequence identity to plant homologs, with the highest sequence conservation found in the putative catalytic and major structural domains. In vivo activity of the heterologously expressed enzyme favors C₁₈ substrates with ν+3 regioselectivity, where the site of desaturation is three carbons carboxy-distal to the reference position of a preexisting double bond (ν). Linoleate accumulated to levels in excess of 12% of the total fatty acids upon heterologous expression of P. chrysosporium FAD2 in Saccharomyces cerevisiae. In contrast to the behavior of the plant FAD2 enzymes, this oleate desaturase does not 12-hydroxylate lipids and is the first example whose activity increases at higher temperatures (30°C versus 15°C). Thus, while maintaining the hallmark activity of the fatty acyl Δ¹²-desaturase family, the basidiomycete fad2 genes appear to have evolved substantially from an ancestral desaturase.Desaturases, the enzymes responsible for unsaturated fatty acid biosynthesis, are found throughout the eukaryotic taxa. Critical cellular processes dependent on the modification of acyl lipids by desaturases include the regulation of membrane structure and fluidity, proper function of ion channels and other membrane proteins, and the biosynthesis of signaling molecules, such as jasmonic acid and arachidonic acid-derived second messengers (53, 71). Polyunsaturated fatty acids (PUFAs) with double bonds at carbon-12, such as linoleic acid (18:2Δ9c,12c), are not synthesized by animals, who therefore depend upon the activities of the stepwise action of the Δ⁹- and Δ¹²-desaturases from plants and lower eukaryotes to generate these essential lipids.Supplementation of our diet with PUFAs derived from transgenic organisms has been targeted in recent years. Expression of fungal (37) and plant (56) desaturase genes in mammalian cells has been explored as a means to enhance the nutritional quality of meat products. Oleate and PUFA desaturases and elongases are gene targets sought after for transgenic production of the C₂₀ and C₂₂ polyunsaturated food supplements docosahexenoic and eicosapentenoic acids in alga, plants, and yeast (35, 51). The practical success of lipid metabolic engineering studies is dependent upon the expression of enzymes with high chemo- and regioselectivity within the transgenic organism, coupled with the manipulation of lipid biochemical flux to result in high, economically viable levels of unsaturated storage oil accumulation.Two evolutionarily distinct desaturase types exist: the soluble plastidal and the membrane-bound endoplasmic reticulum (ER)-localized enzymes, both of which use NAD(P)H and O₂ to sequentially abstract two hydrogens from vicinal sp³-hybridized carbons leading to a cis-alkene (15, 61). Current models for all fatty acyl desaturases postulate the activation of molecular oxygen at a nonheme diferrous active site that culminates with two C-H bond scissions and the formation of water (20, 29, 39, 46). In the case of the microsomal desaturases, conserved iron ligands appear to be located in three distinctive histidine box motifs (61). Microsomal Δ¹²-desaturases (FAD2s) are best known from plants, where they exhibit substantial (60 to 90%) sequence identity and have focused regioselectivity yet have evolved into the diverged desaturases that catalyze distinct oxidative processes, resulting in natural products with hydroxy, conjugated polyalkenyl, epoxy, and acetylenic functionalities (65). Studies of the FAD2 superfamily have been propelled by commercial interest in the modification of standard oilseed crops with “diverged” fad2 genes that show atypical regio- and/or chemoselectivity (32, 38, 50). Despite the sheer number of plant Δ¹²-desaturases, the refractory nature of these membrane-bound enzymes to purification has left structure/function relationships ill defined (33). Consequently, only the rough classification of the FAD2 enzymes into distinct functional or evolutionary classes has occurred, largely using genetic and in vivo functional characterization (12, 38, 42).While the Δ¹²- or FAD2 desaturases, which form a 12,13-double bond, are best known from plants, fungal fad2 homologs have been found in zygomycetes and ascomycetes (8, 52, 59). As suggested by molecular clock data, Basidiomycota and Ascomycotina diverged approximately 550 million years ago (3), indicating that metabolic basidiomycete genes may differ significantly from those of other fungal subtypes. With their high linoleic acid content, typically 60 to 80% of the lipid in basidiomycete fruiting bodies (63), and their ability to grow under varied temperature regimes, macrofungi provide an untapped genetic resource for desaturases that may be well suited for biotechnological applications. Indeed, two homobasidiomycete Δ¹²-desaturases have been recently reported (57, 77).In fungi, variations in membrane lipid composition caused by temperature cycling may be integral to the morphological changes of fruit body formation (58). Linoleate-derived hydroxy fatty acids and lactones have been shown to provide molecular signals, called Psi factors, involved in ascomycete sporulation (8, 9). Disruption of the oleoyl-phosphatidycholine desaturase odeA in Aspergillus parasiticus results in diminished growth; delayed germination has been proposed as a countermeasure for controlling this aflatoxigenic species (74). Additionally, volatile organic species emitted by fungi (e.g., (−)-1-octen-3-ol and 10-oxodecanoic acid) play a role in the palatability of mushrooms and may also mediate sporulation and the transition from vegetative to reproductive tissues (10). Separately, targeting Δ¹²-desaturases, which have no known homologs in humans, in pathogenic basidiomycetes has real potential as selective fungicidal targets. Cryptococcus neoformans infections in AIDS and immunosuppressed patients are frequently observed in the clinic; consequently, developing antimicrobial agents targeting C. neoformans will markedly improve the health of these patients (55).Phanerochaete chrysosporium is a widely distributed wood decay homobasidiomycete that has become a model system for studying lignocellulose degradation (41). It harbors an array of peroxidases and degrading lignocellulose as well as aromatic pollutants (14, 26). A role for linoleate (18:2), which may be supplied from endogenous wood lipids or through fungal Δ¹²-desaturation, in the mediation of lignin degradation has been suggested whereby diffusible lipid-derived peroxyl or alkoxy radicals aid in the initial decay of sound wood, particularly in white-rot fungi lacking lignin peroxidase (36, 73). The production of free 18:2 during early colonization of wood meal, followed by extracellular lipid peroxidation and in vitro degradation of nonphenolic lignin, has been shown for the white-rot fungus Ceriporiopsis subvermispora (16).As part of our program to elucidate the biosynthetic networks leading to highly unsaturated natural products in basidiomycetes (e.g., the polyacetylenes) (45), we carried out the cloning and sequence analysis of the gene encoding the sole Δ¹²-desaturase from P. chrysosporium. In this paper, we demonstrate its function through heterologous expression in Saccharomyces cerevisiae and show that this enzyme has features distinct from other fungal and plant FAD2 desaturases, which should facilitate future isolation and structure-function analysis of diverged macrofungal desaturases.     

Gene Cloning and Heterologous Expression of Glycoside Hydrolase Family 55 β-1,3-Glucanase from the Basidiomycete Phanerochaete Chrysosporium

The basidiomycete Phanerochaete chrysosporium produces several β-1,3-glucanases when grown on laminarin, a β-1,3/1,6-glucan, as the sole carbon source. To characterize one of the major unknown β-1, 3-glucanases with a molecular mass of 83 kDa, identification, cloning, and heterologous over-expression were carried out using the total genomic information of P. chrysosporium. The cDNA encoding this enzyme included an ORF of 2337 bp and the deduced amino acid sequence contains a predicted signal peptide of 26 amino acids and the mature protein of 752 amino acids. The amino acid sequence showed a significant similarity with glycoside hydrolase family 55 enzymes from filamentous fungi and was named Lam55A. Since the recombinant Lam55A expressed in the methylotrophic yeast Pichia pastoris degraded branched β-1,3/1,6-glucan as well as linear β-1,3-glucan, the kinetic features of the enzyme were compared with those of other β-1,3-glucanases.     

β-Ether cleavage of the lignin model compound 4-ethoxy-3-methoxyphenylglycerol-β-guaiacyl ether and derivatives by Phanerochaete chrysosporium

The white rot basidiomycete Phanerochaete chrysosporium metabolized 4-ethoxy-3-methoxyphenyl-glycerol--guaiacyl ether (V) in low nitrogen, stationary cultures under which conditions the ligninolytic enzyme system is expressed. 4-Ethoxy-3-methoxyphenylglycerol XIII, guaicol and 4-ethoxy-3-methoxybenzyl alcohol (II) were isolated as metabolic products. Exogenously added XIII was rapidly converted to 4-ethoxy-3-methoxybenzyl alcohol indicating that it is an intermediate in the metabolism of V. P. chrysosporium also metabolized 1-(4-ethoxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)-3-hydroxypropane VI. The degradation pathway for this dimer also included initial -ether cleavage and -hydroxylation of the diol product 1-(4-ethoxy-3-methoxyphenyl) 2,3 dihydroxypropane (XI) to yield the triol XIII which was cleaved at the , bond to yield 4-ethoxy-3-methoxybenzyl alcohol. Finally P. chrysosporium also cleaved the dimer 1-(4-ethoxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)-1-hydroxypropane (VIII) at the -ether linkage yielding 1-(4-ethoxy-3-methoxyphenyl) 1,2 dihydroxypropane (IX) which was subsequently cleaved at the , bond to yield II. All of the results indicate that oxidative -ether cleavage is an important initial reaction in the metabolism of -aryl ether lignin substructure dimeric compounds. Metabolities were identified after comparison with chemically synthesized standards by gas liquid chromatography-mass spectrometry.Abbreviations GLC Gas liquid chromatography - TMSi trimethylsilyl - TLC thin layer chromatography     

Oxalate production at different initial Pb²+ concentrations and the influence of oxalate during solid-state fermentation of straw with Phanerochaete chrysosporium

The production of oxalate at different initial Pb²⁺ concentrations during solid-state fermentation of straw with Phanerochaete chrysosporium was investigated. It was found that the maximal peak value of oxalate concentration (22.84 mM) was detected at the initial Pb²⁺ concentration of 200 mg kg⁻¹ dry straw, while the minimum (15.89 mM) at the concentration of 600 mg Pb²⁺ kg⁻¹ dry straw, and at moderate concentration of Pb²⁺ the capability of oxalic acid secretion was enhanced. In addition, it was also found that more oxalic acid accumulation went together with better Pb²⁺ passivation effect and higher manganese peroxidase (MnP) activity. The present findings will improve the understandings of the interactions of heavy metals with white-rot fungi and the role of oxalate in lignin degradation system, which could provide useful references for more efficient treatment of Pb-contaminated lignocellulosic waste.     

Metabolism of the lignin model compounds veratrylglycerol-β-guaiacyl ether and 4-ethoxy-3-methoxyphenylglycerol-β-guaiacyl ether by Phanerochaete chrysosporium

The white rot fungus Phanerochaete chrysosporium metabolized the lignin model compounds veratylglycerol--guaiacyl ether I and 4-ethoxy-3-methoxy-phenylglycerol--guaiacyl ether V in stationary culture under an atmosphere of 100% oxygen and under nitrogen limiting conditions. 2-(o-methoxyphenoxy)-ethanol VII was identified as a product of the metabolism of both substrates. Veratryl alcohol and 4-ethoxy-3-methoxybenzyl alcohol IV were identified as metabolites of I and V respectively. Metabolites were identified after comparison with chemically synthesized standards by mass spectrometry. These results indicate the existence of an enzyme system capable of directly cleaving the etherated dimers I and V at the , bond. The additional identification of 2-(o-methoxyphenoxy)-1,3 propanediol IX as a metabolic product indicates that cleavage of the alkyl-phenyl bond of these dimers or their metabolites also occurs.Abbreviations GLC Gas liquid chromatography - TMSi trimethylsilyl - TLC Thin layer chromatography     

Desarrollo de un bioadsorbente laminar con Phanerochaete chrysosporium hipertolerante al cadmio,al níquel y al plomo para el tratamiento de aguas

BackgroundThe use of basidiomycetes for metal removal is an alternative to traditional methods. In this, the biomass acts as a natural ionic exchanger removing metals from solution.ObjectiveTo develop a laminar biosorbent using a basidiomycete fungus resistant to high Cd, Ni and Pb concentrations.MethodsThe tolerance of Trametes versicolor, Pleurotus ostreatus and Phanerochaete chrysosporium was evaluated using increasing concentrations of the heavy metal salts, cadmium sulphate, lead acetate and nickel chloride. A biosorbent system was developed based on polyethylene sheets with a fungal biomass. It was evaluated in bubble columns using synthetic wastewater with the 3 metal salts at a rate of 300 mg/l. Finally, in a complementary experiment using shake flasks, the effect of a higher amount of biomass related to the metal removal efficiency was evaluated.ResultsP. chrysosporium strain was more tolerant to C₄H₆O₄Pb (10,000 mg/l), Cl₂Ni (300 mg/l) and CdSO₄·8H₂O (1,500 mg/l). In a reactor, under non-ligninolytic conditions, the fungus removed 69% of the chemical oxygen demand and produced enzymes such as LiP (0.01 U/l) and MnP (0.6 U/l.). An accumulation of metals in the wall was observed. By increasing the biomass to 1.6 (w/v), the metal biosorption was favored in the mixture (57% Pb, 74% Cd, and 98% Ni) and separately (95% Pb, 60% Cd, and 56% Ni). Competition between Ni and Pb by ligands of the wall was observed.ConclusionA novel laminar system based on P. chrysosporium viable biomass was developed. It has a large surface area and tolerance to high concentrations of Cd, Ni and Pb. It seems to be an alternative for the removal of metals from water.     

The molecular composition of lignin in spruce decayed by white-rot fungi (Phanerochaete chrysosporium and Trametes versicolor) using pyrolysis-GC–MS and thermochemolysis with tetramethylammonium hydroxide

Pyrolysis-gas chromatography-mass spectrometry (Py-GC–MS) and off-line thermochemolysis with tetramethylammonium hydroxide followed by GC–MS were used in the molecular characterisation of lignin in spruce wood decayed by Phanerochaete chrysosporium and Trametes versicolor. Mono-methoxyphenols were the main pyrolysis products from the undegraded lignin. Py-GC–MS provided qualitative evidence that 2-methoxy-4-(prop-2-enal)phenol and trans-2-methoxy-4-(1-hydroxy-prop-2-enyl)phenol content decreased whereas 1,2-dihydroxybenzene increased in intensity relative to other products upon fungal decay. Comparison of methylated phenols from thermochemolysis revealed that ratio of methyl 3,4-dimethoxybenzoate to 3,4-dimethoxybenzaldehyde increased from 0.69 in control spruce to 2.3 after decay by P. chrysosporium and 3.7 following growth of T. versicolor. The results indicate that white-rot fungi cleave alkyl side chains of β-O-4 linked mono-methoxyphenylpropane structures between the α–β carbon atoms to give lignin residues enriched in carboxylic acids as well as demethylating methoxy groups attached to aromatic nuclei to give dihydroxybenzene products. Py-GC–MS and thermochemolysis are complementary methods for tracking demethylation of aromatic nuclei and oxidation of alkyl side chains caused by white-rot fungi.     

Hydrolysis of β-1,3/1,6-glucan by glycoside hydrolase family 16 endo-1,3(4)-β-glucanase from the basidiomycete Phanerochaete chrysosporium

When Phanerochaete chrysosporium was grown with laminarin (a β-1,3/1,6-glucan) as the sole carbon source, a β-1,3-glucanase with a molecular mass of 36 kDa was produced as a major extracellular protein. The cDNA encoding this enzyme was cloned, and the deduced amino acid sequence revealed that this enzyme belongs to glycoside hydrolase family 16; it was named Lam16A. Recombinant Lam16A, expressed in the methylotrophic yeast Pichia pastoris, randomly hydrolyzes linear β-1,3-glucan, branched β-1,3/1,6-glucan, and β-1,3-1,4-glucan, suggesting that the enzyme is a typical endo-1,3(4)-β-glucanase (EC 3.2.1.6) with broad substrate specificity for β-1,3-glucans. When laminarin and lichenan were used as substrates, Lam16A produced 6-O-glucosyl-laminaritriose (β-d-Glcp-(1–>6)-β-d-Glcp-(1–>3)-β-d-Glcp-(1–>3)-d-Glc) and 4-O-glucosyl-laminaribiose (β-d-Glcp-(1–>4)-β-d-Glcp-(1–>3)-d-Glc), respectively, as one of the major products. These results suggested that the enzyme strictly recognizes β-d-Glcp-(1–>3)-d-Glcp at subsites −2 and −1, whereas it permits 6-O-glucosyl substitution at subsite +1 and a β-1,4-glucosidic linkage at the catalytic site. Consequently, Lam16A generates non-branched oligosaccharide from branched β-1,3/1,6-glucan and, thus, may contribute to the effective degradation of such molecules in combination with other extracellular β-1,3-glucanases.     

Cytochrome b₅ reductase-cytochrome b₅ as an active P450 redox enzyme system in Phanerochaete chrysosporium: atypical properties and in vivo evidence of electron transfer capability to CYP63A2

Two central redox enzyme systems exist to reduce eukaryotic P450 enzymes, the P450 oxidoreductase (POR) and the cyt b? reductase-cyt b?. In fungi, limited information is available for the cyt b(5) reductase-cyt b(5) system. Here we characterized the kinetic mechanism of (cyt b?r)-cyt b? redox system from the model white-rot fungus Phanerochaete chrysosporium (Pc) and made a quantitative comparison to the POR system. We determined that Pc-cyt b?r followed a "ping-pong" mechanism and could directly reduce cytochrome c. However, unlike other cyt b? reductases, Pc-cyt b?r lacked the typical ferricyanide reduction activity, a standard for cyt b? reductases. Through co-expression in yeast, we demonstrated that the Pc-cyt b?r-cyt b? complex is capable of transferring electrons to Pc-P450 CYP63A2 for its benzo(a)pyrene monooxygenation activity and that the efficiency was comparable to POR. In fact, both redox systems supported oxidation of an estimated one-third of the added benzo(a)pyrene amount. To our knowledge, this is the first report to indicate that the cyt b?r-cyt b? complex of fungi is capable of transferring electrons to a P450 monooxygenase. Furthermore, this is the first eukaryotic quantitative comparison of the two P450 redox enzyme systems (POR and cyt b?r-cyt b?) in terms of supporting a P450 monooxygenase activity.