首页 | 本学科首页   官方微博 | 高级检索  
相似文献
 共查询到20条相似文献,搜索用时 625 毫秒
1.
1. River systems offer special environments for the dispersal of aquatic plants because of the unidirectional (downstream) flow and linear arrangement of suitable habitats.
2. To examine the effect of this flow on microevolutionary processes in the unbranched bur-reed ( Sparganium emersum ) we studied the genetic variation within and among nine (sub)populations along a 103 km stretch of the Niers River (Germany–The Netherlands), using amplified fragment length polymorphisms.
3. Genetic diversity in S. emersum populations increased significantly downstream, suggesting an effect of flow on the pattern of intrapopulation genetic diversity.
4. Gene flow in the Niers River is asymmetrically bidirectional, with gene flow being approximately 3.5 times higher in a downstream direction. The observed asymmetry is probably caused by frequent hydrochoric dispersal towards downstream locations on the one hand, and sporadic zoochoric dispersal in an upstream direction on the other. The spread of vegetative propagules (leaf and stem fragments) is probably not an important mode of dispersal for S. emersum , suggesting that gene flow is mainly via seed dispersal. Realized dispersal distances exceeded 60 km, revealing a potential for long-distance dispersal in S. emersum .
5. There was no correlation between geographical and genetic distances among the nine S. emersum populations (i.e. no isolation by distance), which may be due to the occurrence of long-distance dispersal and/or colonization and extinction dynamics in the Niers River.
6. Overall, the genetic population structure and regional dispersal patterns of S. emersum in the Niers River are best explained by a linear metapopulation model. Our study shows that flow can exert a strong influence on population genetic processes of plants inhabiting stream systems.  相似文献   

2.
Aim  In order to look for a possible centre of survival for the Norway spruce ( Picea abies Karst.) in the south-western Alps, six natural populations of this area were investigated by means of genetic markers in order to assess the degree and the distribution of genetic diversity within the species.
Location  Western and South-western Alps.
Methods  Populations were genotyped using seven simple sequence repeat (SSR) markers. Basic population genetics parameters were estimated and the amount of genetic differentiation calculated.
Results  A large amount of variability was found (0.59 <  H e < 0.67); genetic differentiation as measured by F ST was 0.05, close to other similar studies; no isolation by distance was detected by a Mantel test. Analysis of molecular variance confirmed a high degree of variability within populations and a low degree of variability among populations. Finally, the number of populations from which those observed could have arisen was estimated by Bayesian analysis.
Main conclusions  The results presented here suggest that the present populations derive their genetic make-up from three inferred clusters. The possible existence in this area of a relict/refuge population during the last glaciation is discussed.  相似文献   

3.
Aims:  To assess levels of faecal contamination in the Qu'Appelle River (Saskatchewan, Canada) and its suitability for irrigation, by using the Colilert-18/Quanti-Tray technology.
Methods and Results:  Various sites located along the Qu'Appelle River were sampled weekly from May to August 2005–2007. A total of 594 freshwater samples were collected and analysed for enumeration of Escherichia coli using the Colilert-18. The false-positive rate for E. coli detection using Colilert-18 was at most 1·5%. Throughout the irrigation period (June to August), up to 85% of the water samples collected from one of the irrigation water-pumping sites exceeded the recommended limit of 100 CFU per 100 ml. Spikes in E. coli counts were generally concomitant with the sudden rise in river flows. A sub-sample of confirmed E. coli isolates were typed by randomly amplified polymorphic DNA (RAPD). RAPD analysis revealed a high degree of genetic diversity among E. coli isolates. A significant association between RAPD patterns and the month of E. coli isolation was demonstrated.
Conclusions:  Colilert-18 provides an effective means for assessing microbial quality of irrigation water.
Significance and Impact of the Study:  Qu'Appelle River is subject to variability of faecal contamination during irrigation times and monitoring throughout irrigation season is important for ensuring safe production practices.  相似文献   

4.
1. Environmental variables, benthic algal biomass and macroinvertebrate fauna were examined from September 1999 to January 2000 (austral summer) along two glacier-fed rivers in South Island, New Zealand.
2. The rivers were characterized by high flow variability, high turbidity and physically disturbed beds. Water temperature ranged from <1 °C near the glacier margin to 10 °C further downstream.
3. Epilithic algal biomass was very low (<0.1 mg m–2) in months characterized by heavy rainfall, but ranged from 1.1 to 14.4 mg m–2 following an extended period with negligible precipitation.
4. Abundance and diversity of invertebrates in both rivers was low. Dominant taxa were Chironomidae (Orthocladiinae, Podonominae, Diamesinae), although mayfly species ( Deleatidium : Leptophlebiidae) also occurred at most sites. A species of Eukiefferiella (Orthocladiinae) was collected at all sites and was the most abundant invertebrate close to the glacier margins. No meiofauna were found in either river.
5. Faunal diversity increased at the lowermost stations where species of Plecoptera, Trichoptera, Coleoptera and non-chironomid Diptera also occurred.
6. The faunas of the two New Zealand rivers conformed to the conceptual model of Milner & Petts (1994) in that taxon richness increased downstream with water temperature. However, invertebrate abundance increased downstream in only one of the two rivers. Also in contrast to the model predictions, Leptophlebiidae and Orthocladiinae, rather than Diamesinae, dominated the fauna at the coldest sites.  相似文献   

5.
Wang HY  Tsai MP  Yu MJ  Lee SC 《Molecular ecology》1999,8(11):1879-1888
The genetic subdivision of the endemic minnow, Zacco pachycephalus, in 12 rivers of Taiwan was studied by allozyme electrophoresis. Among 26 loci surveyed, six were significantly differentiated among sites. Allozyme genotype frequencies within samples accord with Hardy-Weinberg expectations. A highly divergent genetic structure among sites (FST = 0.497) with low genetic variability within samples (H = 0.006-0.062, mean = 0.03) suggests that local populations originated from a small number of founders. UPGMA and Fitch trees derived from Nei's genetic distance and hierarchical analysis of FST values reveal that samples of Z. pachycephalus can be divided into northern, middle, and southern subgroups and that most genetic variation (87%) is distributed among rather than within groups. It is proposed that there were two isolated refugia during the most recent glacial period, and that populations of the southern group (Group I) originated from a southern refugium in Taiwan below the boundary of the Kaoping River, and other groups (Group II), including northern and middle subgroups, originated from a refugium located on the extinct land-bridge between Taiwan and mainland China. The postglacial division between northern and middle subgroups may be due to hydrological differences between these two regions.  相似文献   

6.
The golden-striped salamander (Chioglossa lusitanica) is an ecologically specialized species, endemic to north-western Iberia. Patterns of genetic variation were assessed at seven polymorphic enzyme loci and one mitochondrial DNA (mtDNA) marker (cytochrome b) in 17 populations across its range. Estimates of enzyme genetic diversity revealed a high degree of genetic subdivision (FST = 0.68), mainly attributable to the existence of two groups of populations. The groups were located, respectively, north and south of the Mondego River, indicating that this river coincided with a major historical barrier to gene flow. A significant decrease in genetic variability from the Mondego northwards was associated with the Douro and Minho rivers. mtDNA sequence variation revealed a congruent pattern of two haplotype groups (d = 2.2%), with a geographical distribution resembling that of allozymes. The pattern and depth of genetic variation is consistent with the following hypotheses: (i) subdivision of an ancestral range of the species prior to the middle Pleistocene; (ii) secondary contact between populations representing historical refugia; (iii) relatively recent range expansion giving rise to the northern part of the species range; and (iv) loss of genetic variation through founder effects during range expansion across major rivers.  相似文献   

7.
1. Floodplain rivers in Australia's wet/dry tropics are regarded as being among the most ecologically intact and bio-diverse lotic ecosystems in the world, yet there have been relatively few community-based studies of their aquatic fauna.
2. To investigate relationships between hydrological connectivity and biodiversity in the region, macroinvertebrates were collected from sites within two contrasting floodplain rivers, the 'tropical' Gregory River and 'dryland' Flinders River systems, during the dry season and analysed at various spatial scales. A subset of sites was re-sampled in the following dry season to explore temporal variation. The fauna consisted of 124 morphotaxa, dominated by gatherers and the Insecta.
3. As predicted, hydrological connectivity (the lotic or lentic status of waterbodies) had a major influence on macroinvertebrate assemblage composition and diversity, both in space and time. Assemblages from waterbodies with similar connection histories were most alike, and beta-diversity between assemblages was greatest between lotic and lentic waterbodies, tending to increase with increasing spatial separation.
4. At smaller spatial scales, a number of within-waterbody, habitat and water quality characteristics were important for explaining variation (61%) in the taxonomic organization of assemblages, and characteristics associated with primary productivity and habitat diversity were important for explaining variation (45%) in the functional organization of assemblages. However, much of the small-scale environmental variation across the study region appeared to be related to broad-scale variation in hydrological connectivity, which had both direct and indirect effects on macroinvertebrate assemblages.
5. Conservation of the biodiversity in Australia's wet/dry tropics may depend on conserving the natural variation in hydrological connectivity and the unregulated flow of floodplain rivers.  相似文献   

8.
1. Most temperate rivers are heavily regulated and characterised by incised channels, aggradated floodplains and modified hydroperiods. As a consequence, former extensive aquatic/terrestrial transition zones lack most of their basic ecological functions.
2. Along large rivers in Europe and North America, various floodplain restoration or rehabilitation projects have been planned or realised in recent years. However, restoration ecology is still in its infancy and the literature pertinent to river restoration is rather fragmented. (Semi-) aquatic components of floodplains, including secondary channels, disconnected and temporary waters as well as marshes, have received little attention, despite their significant contribution to biological diversity.
3. Many rehabilitation projects were planned or realised without prior knowledge of their potential for success or failure, although, these projects greatly contributed to our present understanding of river–floodplain systems.
4. River rehabilitation benefits from a consideration of river ecosystem concepts in quantitative terms, comparison with reference conditions, historical or others, and the establishment of interdisciplinary partnerships.
5. We present examples from two large European rivers, the Danube and the Rhine, in which the role of aquatic connectivity has been extensively studied. The Danube delta with its diversity of floodplain lakes across an immense transversal gradient (up to 10 km) serves as a reference system for restoration projects along lowland sections of large rivers such as the Rhine in the Netherlands.  相似文献   

9.
The variability of 45 single nucleotide polymorphism (SNP) loci was studied in nine samples of the sockeye salmon Oncorhynchus nerka from the rivers of southwestern Kamchatka. The Wahlund effect, gametic disequilibrium at some loci, and a decrease in interpopulation genetic diversity indices observed in samples from the Bolshaya River outlet can be attributed to the samples’ heterogeneity. Partitioning of the mixed samples using some biological characteristics of the individuals led to a noticeable decrease in the frequency of these phenomena. It was demonstrated that the allelic diversity between the populations within the river accounted for the larger part of genetic variation, as compared to the differentiation between the basins. The SNP loci responsible for intra- and interpopulation differentiation of sockeye salmon from the rivers of southwestern Kamchatka were identified. Some recommendations for field population genetic studies of Asian sockeye salmon were formulated.  相似文献   

10.
北鳅(Lefua costata)为冷水性鱼类, 分布于淮河以北, 分析遗传结构能够反映其适应环境变迁的响应。基于线粒体D-loop区211条序列分析了我国北鳅的谱系地理学和遗传多样性, 样本采自9条水系共18个样点。单倍型分析显示共计55个单倍型, 呈高单倍型多样性(h=0.9304)和高核苷酸多样性(π=0.0087)。单倍型多样性和核苷酸多样性最高的为辽东半岛种群(LD) (h=0.8920, π=0.0074), 其他地理种群距辽东半岛越远, 单倍型多样性越低。遗传距离(K2P)、群体间的遗传分化指数(FST)及AMOVA分子方差分析均显示LD种群与其他地理种群存在显著分化。基于单倍型构建的分子系统发育树和单倍型网络关系图均显示9条水系的单倍型不能各自聚类, 形成3大分支: 分支A以LD种群为主; 分支B含所有地理种群; 分支C以淮黄河种群(HH)和海滦河种群(HL)为主。中性检验和错配分析显示不同地理种群有扩张现象。基于化石校准点和北鳅鱼类D-loop序列1.00%Ma的平均进化速率评估各地理种群的分歧时间, 为2.3784— 0.0477Ma前, LD种群与其他地理种群分化时间最早(2.3784 Ma前), 推测LD种群受第四纪冰期影响较小, 辽东半岛为我国北鳅起源地之一, 其他地理种群以辽东半岛为中心借助松辽古大湖和黄渤海平原河口等发生多次迁移。  相似文献   

11.
1. The recent arrival and explosive spread of the zebra mussel, Dreissena polymorpha (Pallas), in Ireland provided a rare opportunity to study the population genetics of an invasive species.
2. Eight polymorphic allozyme loci ( ACO-1, ACO-2 , EST-D, GPI, IDH-2, MDH, OPDH and PGM ) were used to investigate genetic diversity and population structure in five Irish populations, and the results were compared with those from a previous microsatellite study on the same samples.
3. The mean number of alleles per locus (2.7 ± 0.1) was similar to the mean for the same loci in European populations, suggesting that Irish founder populations were large and/or multiple colonization events took place after foundation. A deficiency of heterozygotes was observed in all populations, but was uneven across loci.
4. Pairwise comparisons, using Fisher's exact tests and F ST values, revealed significant genetic differentiation among populations. The overall multilocus F ST estimate was 0.118 ± 0.045, which contrasted with an estimate of 0.015 ± 0.007 from five microsatellite loci on the same samples in a previous study.
5. Assuming that microsatellites can be used as a neutral baseline, the discordant results from allozymes and microsatellites suggest that selection may be acting on some allozyme loci, specifically ACO-1, ACO-2 , IDH-2 and MDH, which contributed most to the significant differentiation between samples.  相似文献   

12.
1. An important goal of conservation biology is to preserve the evolutionary potential of a species by maintaining natural levels of genetic diversity. Here, we assess the population differentiation in the Atlantic salmon, Salmo salar, listed in Annex II of the European Habitats Directive, to provide valuable information for its conservation in Normandy (France).
2. Samples collected from 10 natural sites revealed that 13 of 14 microsatellite loci were polymorphic. Significant differentiation among populations was detected ( F ST = 0.054, P  <   0.001), and all F ST pairwise comparisons except one were significant. A genetic split was observed between populations inhabiting streams with limestone geology compared to those inhabiting streams with siliceous geology, which could reflect adaptative differences.
3. Hatchery stocks used for the restocking of two rivers were genetically distinct from native stocks.
4. Analysis of three stream habitats restored in 1995 showed that all were recolonized naturally by wild salmon from geographically close populations and no founder effects were detected. Allelic richness was similar between recolonized and wild populations.
5. From a management perspective, our study revealed that restoration of habitat is very effective to recreate new populations in rivers from which salmon have disappeared and that natural recolonization can be fast and effective in terms of genetic diversity.  相似文献   

13.
1. Brown trout ova were imported during the last century from different locations in Europe to establish populations in Chilean rivers (South America). The rivers are currently occupied by naturalized populations that have adapted to very different environmental conditions, such as areas of semi-desert in the north, or rainy and cold areas in the south.
2. In this first study in this geographical area, electrophoretic variability of proteins encoded by twenty-five loci was screened in seven populations from northern to southern Chile.
3. The results show significant heterogeneity of allelic frequencies between populations in seven of eleven polymorphic loci detected. The estimated value of genetic diversity 0.1274 ( H T) is higher than that observed in populations from areas of natural distribution of this species. However, only 12.64% of this genetic diversity was found between samples ( G ST), indicating a low genetic divergence among Chilean populations. The observed associations among the Chilean and 'modern' group of European populations suggests the probable origin of the new populations.  相似文献   

14.
Medicago citrina is an endangered western Mediterranean endemic that grows only on small islets of the Balearic archipelago and off the eastern Spanish coast. Only 10 isolated subpopulations are currently known (four from Ibiza, three from Cabrera, two from Columbretes and one from an offshore islet in northern Alicante province), constituting a severely fragmented genetic system. Data were analysed with the unweighted pair-group method using arithmetic averages (UPGMA) and principle coordinates analysis (PCOA), revealing several distinct groups. Genetic diversity indices indicated that Ibizan subpopulations had the highest genetic variability (Nei's index: 0.1463; Shannon's index: 0.228), whereas the lowest variability was found in Alicante (Nei's index: 0.035; Shannon's index: 0.050) and Cabrera (Nei's index: 0.068; Shannon's index: 0.104). These latter populations show the highest FST values (FST = 0.548) revealing high differentiation between them. Columbretes subpopulations formed a defined single group, although it also included some Ibizan samples. The smallest FST values, obtained between Ibiza and Columbretes (FST = 0.185), are not correlated with geographical proximity, but appear to be related to the geologically recent volcanic origin of the Columbretes islands (300,000 years ago). According to the distribution of the Ibizan samples in the dendrogram and the FST values, the best hypothesis is to regard the Ibizan subpopulations as the centre of genetic diversity of the currently known subpopulations. Our results suggest migratory scenarios from Ibiza to Columbretes based mainly on zoochory probably by seabirds. Finally, recommendations are provided for management strategies to facilitate the conservation of this endangered species.  相似文献   

15.
1. The landscapes of large floodplain rivers are characterised by heterogeneous environments related to the interplay of flood flows, sediment transport and vegetation dynamics.
2. The large rivers of Europe, and probably most rivers throughout the forest biomes, were characterised by islands but over the period of major human interference, many have become dominated by incision and narrowing so that they are now characterised by single-thread and relatively simple channel forms.
3. Vegetation plays an active role in developing heterogeneous channel forms through (a) biotic processes such as seed dispersal, vegetative regeneration and succession and (b) abiotic effects such as increasing flow resistance inducing sedimentation, and decreasing bank erodibility.
4. In particular, accumulations of living driftwood (cf. dead driftwood accumulations and dispersed seedlings) accelerate sedimentation and island development.
5. River reaches with vegetated islands have a high habitat diversity.
6. The natural influences of flood disturbance, wood accumulation, vegetation growth, island development and tree die-off, cause island-dominated reaches to undergo cycles of island growth and decay that are related to cycles of aquatic habitat diversification and simplification.  相似文献   

16.
Aim  Middle East brown bears ( Ursus arctos syriacus Hemprich and Ehrenberg, 1828) are presently on the edge of extinction. However, little is known of their genetic diversity. This study investigates that question as well as that of Middle East brown bear relationships to surrounding populations of the species.
Location  Middle East region of south-western Asia.
Methods  We performed DNA analyses on 27 brown bear individuals. Twenty ancient bone samples (Late Pleistocene to 20th century) from natural populations and seven present-day samples obtained from captive individuals were analysed.
Results  Phylogenetic analyses of the mitochondrial sequences obtained from seven ancient specimens identify three distinct maternal clades, all unrelated to one recently described from North Africa. Brown bears from Iran exhibit striking diversity (three individuals, three haplotypes) and form a unique clade that cannot be linked to any extant one. Individuals from Syria belong to the Holarctic clade now observed in Eastern Europe, Turkey, Japan and North America. Specimens from Lebanon surprisingly appear as tightly linked to the clade of brown bears now in Western Europe. Moreover, we show that U. a. syriacus in captivity still harbour haplotypes closely linked to those found in ancient individuals.
Main conclusion  This study brings important new information on the genetic diversity of brown bear populations at the crossroads of Europe, Asia and Africa. It reveals a high level of diversity in Middle East brown bears and extends the historical distribution of the Western European clade to the East. Our analyses also suggest the value of a specific breeding programme for captive populations.  相似文献   

17.
An integrated modeling approach is used to link land use to river discharge, and then to survival of larval walleye that hatch in northern Ohio streams draining into Lake Erie (USA). First, to link land use and river discharge, the parameters of a simple hydrologic model are statistically related to watershed landscape attributes, including forest cover. One such relationship allows estimation of the change in daily river discharge that could result from a reduction in basin-scale forest cover. Second, to represent the river discharge-larval survival link, we reexamine a dataset from Mion and others to propose a relationship between daily flow velocity, water temperature, and walleye larval survival. Together, these linked models provide estimates of the reduction in larval survival due to reduction in forest cover, along with the uncertainty of those estimates. For the Grand River watershed, decreasing forest cover from 45.2 to 30% is projected to reduce average larval survival by about 45%. In the adjacent Chagrin River, dropping cover from 62.5 to 30% reduces survival by almost 60%. The greater rate of reduction of survival in the Chagrin River as forest levels fall is explained by a relatively greater increase in storm flows for the Chagrin, due to more frequently saturated soils. Therefore, forest preservation in the Chagrin River watershed is projected to be more effective in preserving walleye larval tributary habitat.  相似文献   

18.
Wild populations of Prenant’s schizothoracin, Schizothorax prenanti, were collected from the Qingyi, Dadu, and Muli rivers in upper reaches of the Yangtze River. Genetic variation and population structure were examined based on analysis of the mitochondrial DNA control region. Nucleotide sequence analysis defined 30 haplotypes in 41 individuals. The nucleotide and haplotype diversities were very high, and genetic distances between the Dadu and Qingyi populations were much smaller than between either of them and the Muli population. The analysis of molecular variance demonstrated that most variation occurred within samples, and the differentiation between Muli and Dadu or Qingyi was significant. Estimates of gene flow indicated reproductive isolation between Muli and the other populations, and this divergence might be related to geographical location. The results are mostly consistent with the findings from AFLP analysis and also suggested considerable genetic diversity of the populations in the Muli, Dadu, and Qingyi rivers.  相似文献   

19.
Aims:  To investigate the genetic relatedness between Lactococcus garvieae strains isolated from fish and dairy samples collected in northern Italy, using random-amplified polymorphic DNA (RAPD)-polymerase chain reaction (PCR), Sau -PCR and amplified fragment length polymorphism (AFLP).
Methods and Results:  Eighty-one isolates from bovine and caprine dairy products ( n  = 53) and from diseased rainbow trouts and other fishes ( n  = 28) were examined. All methods showed a typeability of 100%, repeatability ranging from 84·4% to 97·5% and discriminatory powers from 0·798 to 0·986. Dairy and fish strains revealed a low genetic relatedness as they are often grouped into distinct clusters. RAPD analysis discriminated 52 genotypes when primer M13 was used, whereas with primer P5 only 27 genotypes were identified. When Sau -PCR was performed, 13 genotypes were detected while AFLP analysis allowed the differentiation of 32 genotypes.
Conclusion:  L. garvieae strains isolated from dairy samples are generally not related to those collected from fish lactococcosis outbreaks.
Significance and Impact of the Study:  L. garvieae strains exhibit a genetic diversity related to the specific animal host they colonize. RAPD M13 fingerprinting proved to be a molecular tool for comparing isolates, whereas Sau -PCR and AFLP analyses were useful techniques to investigate the distribution of L. garvieae populations in the environment.  相似文献   

20.
Leporinus friderici, native to the Amazon Basin and popularly known as "piau-três-pintas", has great ecological and economic importance; it is widely fished and consumed throughout much of tropical South America. Knowledge of the genetic diversity of this native species is important to support management and conservation programs. We evaluated microsatellite loci amplification, using heterologous primers, in 31 individuals of L. friderici. These samples were collected from natural populations of the Araguaia River basin, in central Brazil, and the DNA was extracted from samples of muscle tissue. Eight loci were successfully analyzed. Six of them were polymorphic, and the number of alleles ranged from three to 10. Values of expected heterozygosities for these polymorphic loci ranged from 0.488 to 0.795. Exclusion probability (0.983), the identity probability (0.000073), and the mean genetic diversity values were high, showing that these microsatellite markers are suitable for assessing the genetic variability of L. friderici populations. There is a growing interest in studies that evaluate the genetic variability of natural populations for various purposes, such as conservation. Here, we showed that a viable alternative to the costly development of specific primers for fish populations is simply testing for heterologous amplification of microsatellite markers available from research on other species.  相似文献   

设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号