Nitrogen availability to Pseudomonas fluorescens DF57 is limited during decomposition of barley straw in bulk soil and in the barley rhizosphere.

The availability of nitrogen to Pseudomonas fluorescens DF57 during straw degradation in bulk soil and in barley rhizosphere was studied by introducing a bioluminescent reporter strain (DF57-N3), responding to nitrogen limitation, to model systems of varying complexity. DF57-N3 was apparently not nitrogen limited in the natural and sterilized bulk soil used for these experiments. The soil was subsequently amended with barley straw, representing a plant residue with a high carbon-to-nitrogen ratio (between 60 and 100). In these systems the DF57-N3 population gradually developed a nitrogen limitation response during the first week of straw decomposition, but exclusively in the presence of the indigenous microbial population. This probably reflects the restricted ability of DF57 to degrade plant polymers by hydrolytic enzymes. The impact of the indigenous population on nitrogen availability to DF57-N3 was mimicked by the cellulolytic organism Trichoderma harzianum Rifai strain T3 when coinoculated with DF57-N3 in sterilized, straw-amended soil. Limitation occurred concomitantly with fungal cellulase production, pointing to the significance of hydrolytic activity for the mobilization of straw carbon sources, thereby increasing the nitrogen demand. Enhanced survival of DF57-N3 in natural soil after straw amendment further indicated that DF57 was cross-fed with carbon/energy sources. The natural barley rhizosphere was experienced by DF57-N3 as an environment with restricted nitrogen availability regardless of straw amendment. In the rhizosphere of plants grown in sterilized soil, nitrogen limitation was less severe, pointing to competition with indigenous microorganisms as an important determinant of the nitrogen status for DF57-N3 in this environment. Hence, these studies have demonstrated that nitrogen availability and gene expression in Pseudomonas is intimately linked to the structure and function of the microbial community. Further, it was demonstrated that the activities of cellulolytic microorganisms may affect the availability of energy and specific nutrients to a group of organisms deficient in hydrolytic enzyme activities.     

Distribution of metabolic activity and phosphate starvation response of lux-tagged Pseudomonas fluorescens reporter bacteria in the barley rhizosphere.

The purpose of this study was to determine the metabolic activity of Pseudomonas fluorescens DF57 in the barley rhizosphere and to assess whether sufficient phosphate was available to the bacterium. Hence, two DF57 reporter strains carrying chromosomal luxAB gene fusions were introduced into the rhizosphere. Strain DF57-40E7 expressed luxAB constitutively, making bioluminescence dependent upon the metabolic activity of the cells under defined assay conditions. The DF57-P2 reporter strain responded to phosphate limitation, and the luxAB gene fusion was controlled by a promoter containing regulatory sequences characteristic of members of the phosphate (Pho) regulon. DF57 generally had higher metabolic activity in a gnotobiotic rhizosphere than in the corresponding bulk soil. Within the rhizosphere the distribution of metabolic activity along the root differed between the rhizosphere soil and the rhizoplane, suggesting that growth conditions may differ between these two habitats. The DF57-P2 reporter strain encountered phosphate limitation in a gnotobiotic rhizosphere but not in a natural rhizosphere. This difference in phosphate availability seemed to be due to the indigenous microbial population, as DF57-P2 did not report phosphate limitation when established in the rhizosphere of plants in sterilized soil amended with indigenous microorganisms.     

Interactions Between Nitrogen and Manganese Nutrition of Barley Genotypes Differing in Manganese Efficiency

Ammonium-fed plants may acidify the rhizosphere and thus increaseavailability of Mn in calcareous alkaline soils. The importanceof N nutrition in the differential expression of tolerance toMn deficiency among cereal genotypes is not yet clear. Two factorialexperiments testing effects of the NH₄-N/NO₃-N ratio and Mnfertilization on growth of barley genotypes differing in toleranceto Mn deficiency were conducted in two calcareous alkaline soilsin pots in a controlled environment. In the soil containing80% CaCO₃at pH 8.5, better root and shoot growth and highershoot Mn concentrations were achieved with nitrate supply, especiallyat lower rates of Mn fertilization. The Mn-efficient genotypeWeeah (tolerant of Mn deficiency) achieved better root and shootgrowth than Mn-inefficient Galleon barley (sensitive to Mn deficiency)regardless of experimental treatment. Fertilization with Mndid not influence total N concentration in barley roots andshoots. In the soil containing 5% CaCO₃at pH 7.8, ammonium-fedplants had better root and shoot growth and, at shoot Mn concentrationsabove the critical level, Mn-inefficient Galleon performed betterthan Mn-efficient Weeah barley. It appears that differentialexpression of Mn efficiency among barley genotypes is not associatedwith differences in Mn availability expected to be producedby differential rhizosphere acidification as a response to differentforms of N supply. There is an apparent preference of locallyselected barley genotypes for nitrate nutrition when grown onthe highly calcareous alkaline soils of southern Australia. Ammonium; calcareous soil; Hordeum vulgare ; manganese; nitrate; nitrogen form; nutrient efficiency; rhizosphere     

Comparison of Two Cellulomonas Strains and Their Interaction with Azospirillum brasilense in Degradation of Wheat Straw and Associated Nitrogen Fixation

A mutant strain of Cellulomonas sp. CS1-17 was compared with Cellulomonas gelida 2480 as the cellulolytic component of a mixed culture which was responsible for the breakdown of wheat straw to support asymbiotic nitrogen fixation by Azospirillum brasilense Sp7 (ATCC 29145). Cellulomonas sp. strain CSI-17 was more efficient than was C. gelida in cellulose breakdown at lower oxygen concentrations and, in mixed culture with A. brasilense, it supported higher nitrogenase activity (C₂H₂ reduction) and nitrogen fixation with straw as the carbon source. Based on gravimetric determinations of straw breakdown and total N determinations, the efficiency of nitrogen fixation was 72 and 63 mg of N per g of straw utilized for the mixtures containing Cellulomonas sp. and C. gelida, respectively. Both Cellulomonas spp. and Azospirillum spp. exhibited a wide range of pH tolerance. When introduced into sterilized soil, the Cellulomonas sp.-Azospirillum brasilense association was more effective in nitrogen fixation at a pH of 7.0 than at the native soil pH (5.6). This was also true of the indigenous diazotrophic microflora of this soil. The potential implications of this work to the field situation are discussed.     

Transfer of plasmid RP4 in the spermosphere and rhizosphere of barley seedling

Transfer of plasmid RP4 to indigenous bacteria in bulk soil could only be detected in soil with nutrient amendment. Lack of physiological active donor and recipient cells was apparently one of the limiting factors in un-amended bulk soil. Plasmid transfer was detected both in the spermosphere and rhizosphere of barley seedlings. Transfer occured from seed coated donor bacteria (i) to introduced recipient bacteria and (ii) to indigenous bacteria present in soil. Plasmid transfer was also detected from donor bacteria introduced to the soil to seed coated recipient bacteria. Transfer efficiencies in the rhizosphere were significantly below the transfer efficiencies obtained in the spermosphere. The transfer efficiencies detected in the barley spermosphere were among the highest reported from any natural environment.     

Water-soluble carbon in roots of rape and barley: impacts on labile soil organic carbon, arylsulphatase activity and sulphur mineralization

Investigating the impact of plant species on sulphur (S) availability in the rhizosphere soil is agronomically important to optimize S fertilization. Bulk, rhizosphere soils and the roots of field-grown rape and barley were sampled 7 times (every fortnight), from March to June, at plant maturity. Root carbon (C) and nitrogen (N) in water extract, along with soil SO₄²⁻-S, labile soil organic-C (HWC) and -N (HWN) in hot water extract, as well as soil arylsulphatase activity were then monitored. The average concentrations of both HWC and HWN were observed in the following decreasing order: rape rhizosphere soil >barley rhizosphere soil >bulk soil. In parallel, the average contents of water extractable-C and -N in rape roots were higher than those in barley roots. These results suggest that soil C and N contents in hot water extract (including rhizodeposition) were correlated with C and N released by roots. Great ARS activities found in rape rhizosphere soil were accompanied by great SO₄²⁻-S mineralization over time. Finally, bulk and rhizosphere soils of rape and barley were pooled from the seven samplings and incubated with the corresponding pooled root water-soluble C of both plant species and glucose-C. After 1 and 9 weeks, a greater net S mineralization (gross mineralization - immobilization) was observed with rape root water-soluble C than with barley root water-soluble C and glucose-C. Conjointly, we found a higher average value of ARS activity in rape rhizosphere than in barley rhizosphere soil. Our findings suggest that plant species, via their rhizodeposition, determine the dynamic of S in soil.     

Green Fluorescent Protein-Marked Pseudomonas fluorescens: Localization, Viability, and Activity in the Natural Barley Rhizosphere

The gfp-tagged Pseudomonas fluorescens biocontrol strain DR54-BN14 was introduced into the barley rhizosphere. Confocal laser scanning microscopy revealed that the rhizoplane populations of DR54-BN14 on 3- to 14-day-old roots were able to form microcolonies closely associated with the indigenous bacteria and that a majority of DR54-BN14 cells appeared small and almost coccoid. Information on the viability of the inoculant was provided by a microcolony assay, while measurements of cell volume, the intensity of green fluorescent protein fluorescence, and the ratio of dividing cells to total cells were used as indicators of cellular activity. At a soil moisture close to the water-holding capacity of the soil, the activity parameters suggested that the majority of DR54-BN14 cells were starving in the rhizosphere. Nevertheless, approximately 80% of the population was either culturable or viable but nonculturable during the 3-week incubation period. No impact of root decay on viability was observed, and differences in viability or activity among DR54-BN14 cells located in different regions of the root were not apparent. In dry soil, however, the nonviable state of DR54-BN14 was predominant, suggesting that desiccation is an important abiotic regulator of cell viability.     

秸秆还田对玉米根际氨氧化微生物群落及红壤硝化潜势的影响

为探讨酸性红壤根际氨氧化微生物群落以及硝化作用对不同秸秆还田处理的响应,基于中国科学院鹰潭红壤生态实验站设置的秸秆还田长期试验平台(9年),采用荧光定量PCR和高通量测序技术,研究不同秸秆还田处理(不施肥(CK);氮磷钾肥(NPK);氮磷钾肥+秸秆(NPKS);氮磷钾肥+秸秆猪粪配施(NPKSM);氮磷钾肥+秸秆生物炭(NPKB))下玉米根际土壤氨氧化古菌(ammonia-oxidizing archaea, AOA)和细菌(ammonia-oxidizing bacteria, AOB)丰度和群落结构的变化,揭示了秸秆还田对根际氨氧化微生物群落结构和硝化潜势(potential nitrification activity, PNA)的影响机制。结果发现：相比CK和NPK处理,秸秆还田显著提高了土壤养分含量和硝化潜势,其中有机碳(SOC)、全氮(TN)、全磷(TP)、速效磷(AP)、速效钾(AK)、硝态氮(NO~-₃-N)和铵态氮(NH~+₄-N)含量显著增加,NPKSM处理对土壤肥力提升效果最佳。AOA的硝化潜势显著高于AOB,表明AOA...     

Bacterial Origin and Community Composition in the Barley Phytosphere as a Function of Habitat and Presowing Conditions

An understanding of the factors influencing colonization of the rhizosphere is essential for improved establishment of biocontrol agents. The aim of this study was to determine the origin and composition of bacterial communities in the developing barley (Hordeum vulgare) phytosphere, using denaturing gradient gel electrophoresis (DGGE) analysis of 16S rRNA genes amplified from extracted DNA. Discrete community compositions were identified in the endorhizosphere, rhizoplane, and rhizosphere soil of plants grown in an agricultural soil for up to 36 days. Cluster analysis revealed that DGGE profiles of the rhizoplane more closely resembled those in the soil than the profiles found in the root tissue or on the seed, suggesting that rhizoplane bacteria primarily originated from the surrounding soil. No change in bacterial community composition was observed in relation to plant age. Pregermination of the seeds for up to 6 days improved the survival of seed-associated bacteria on roots grown in soil, but only in the upper, nongrowing part of the rhizoplane. The potential occurrence of skewed PCR amplification was examined, and only minor cases of PCR bias for mixtures of two different DNA samples were observed, even when one of the samples contained plant DNA. The results demonstrate the application of culture-independent, molecular techniques in assessment of rhizosphere bacterial populations and the importance of the indigenous soil population in colonization of the rhizosphere.     

蚯蚓和秸秆对铜污染土壤微生物类群和活性的影响

试验设置4个Cu浓度水平：0、100、200和400 mg·kg^-1 Cu²⁺,每个Cu浓度水平设置4个处理：对照(CK)、表施秸秆(M)、接种蚯蚓(E)、同时加入蚯蚓和秸秆(ME),研究了在Cu污染土壤中加入蚯蚓和秸秆对土壤微生物数量及活性的影响.结果表明：Cu污染、秸秆和蚯蚓均明显影响土壤微生物类群; Cu污染对细菌、放线菌具有抑制作用,而对真菌没有影响;秸秆显著提高了真菌数量;蚯蚓使土壤细菌、放线菌数量显著增加,而对真菌数量影响不大.Cu污染浓度＞200 mg·kg^-1处理对微生物量碳具有抑制作用;加入秸秆或蚯蚓,可显著提高土壤微生物量碳,而且同时加蚯蚓和秸秆处理土壤微生物量碳增加最显著.加入蚯蚓和秸秆后,土壤呼吸值显著增高.Cu<200 mg·kg^-1时,蚯蚓处理土壤呼吸值最大,平均比对照高3.06～5.58倍;Cu≥200mg·kg^-1时,蚯蚓、秸秆同时加入处理土壤呼吸值最高.4个处理土壤代谢商大小顺序为：ME>E>M>CK.蚯蚓和秸秆处理对土壤NH₄⁺-N没有影响,而对土壤NO₃^--N影响各异.接种蚯蚓,可显著提高土壤NO₃^--N含量;加入秸秆,可显著降低土壤NO₃^--N含量;同时加入蚯蚓和秸秆处理NO₃^--N含量最低.相关分析表明,土壤有效态Cu(DTPA-Cu)与土壤放线菌、细菌呈显著负相关,而与土壤呼吸、土壤NO₃^--N、NH₄⁺-N含量呈显著正相关.引入秸秆和蚯蚓,可在一定程度上减缓Cu污染对微生物数量和活性的影响.     

添加玉米和水稻秸秆对淹水土壤pH、二氧化碳及交换态铵的影响

通过温室土壤培养试验,研究了不同添加量玉米和水稻秸秆对淹水土壤pH、CO₂及交换态铵的影响.结果表明：在接近中性的土壤中加入秸秆可使土壤pH值降低,4 g·kg^-1玉米和水稻秸秆处理的土壤pH值均与对照差异显著（P＜0.05）,而1 g·kg^-1玉米和水稻秸秆处理与对照差异不显著（P＞0.05）.土壤溶液中的CO₂含量随秸秆添加量的增加而增大,1 g·kg^-1玉米和水稻秸秆处理的土壤溶液CO₂含量最大值分别为35.9％和31.9％（v/v）,与对照（25.8％）差异达显著水平（P＜0.05）,但两者间差异不显著（P＞0.05）;4 g·kg^-1玉米和水稻秸秆处理的土壤溶液CO₂含量最大值分别为54.2％和41.8％（v/v）,与对照差异极显著（P＜0.01）,两者间差异也达显著水平（P＜0.05）.在不施氮肥的情况下,添加秸秆可降低土壤铵态氮浓度,且铵态氮浓度随秸秆添加量的增加而降低,不同添加量处理间差异显著（P＜0.05）;在施入氮肥的情况下,1 g·kg^-1玉米和水稻秸秆处理提高了土壤铵态氮浓度,而4 g·kg^-1玉米和水稻秸秆处理降低了土壤铵态氮浓度.无论是否施入氮肥,玉米和水稻秸秆处理的土壤铵态氮浓度差异不显著（P＞0.05）.     

Actinomycetes in the Rhizosphere of Barley Grown on Acid Soddy Podzolic Soil

The study of various factors (soil acidity, the variety of barley, and their developmental phases) on the rhizosphere actinomycete complex showed that it is soil acidity that substantially influences the population of rhizosphere actinomycetes. The effect of soil acidity was most likely due to the different tolerance of rhizosphere actinomycetes to high concentrations of the aluminum and hydrogen ions. The developmental phases of barley correlated with the population indices of only one genus of actinomycetes, Micromonospora.     

Differences on nitrogen availability in a soil amended with fresh, composted and thermally-dried sewage sludge

Anaerobically-digested sludge called fresh sludge (F), composted sludge (C) and thermally-drying sludge (T), all from the same batch, were applied to the surface of a calcareous Udic Calciustept with loamy texture. Dosage equivalent was 10 t ha(-1) of dry matter. The concentration of mineral nitrogen (ammonium and nitrate) in the soil was measured in order to estimate the effects of the post-treatments to which the different kinds of sewage sludge are subjected in relation to the availability of N in the surface layer of the soil. The most significant differences in NH(4)-N and NO(3)-N concentrations due to the transformation of the organic matter were observed during the first three weeks following soil amendment. Thermally-dried and composted sludge initially displayed higher concentrations of ammonium and nitrate in soil. Five months after the amendment, soil applied with fresh sludge showed the highest concentrations of NH(4)-N and NO(3)-N (6.1 and 36.6 mg kg(-1), respectively). It is clear that the processes of composting and thermal-drying influence the bioavailability of nitrogen from the different types of sewage sludge.     

Genes Involved in Cyclic Lipopeptide Production Are Important for Seed and Straw Colonization by Pseudomonas sp. Strain DSS73

Survival in natural bulk soil and colonization of sugar beet seeds and barley straw residues were determined for Pseudomonas sp. strain DSS73 and Tn5 mutants in amsY (encoding a peptide synthetase involved in production of the cyclic lipopeptide amphisin) and gacS (encoding the sensory kinase of the two-component GacA/GacS regulatory system). No differences in survival or growth in response to carbon amendment (citrate) were observed in bulk soil. However, both mutants were impaired in their colonization of sugar beet seeds and barley straw residues by an inoculum established in the bulk soil. The two mutants had comparable colonization phenotypes, suggesting that amphisin production is more important for colonization than other gacS-controlled traits.     

秸秆、氮肥和食细菌线虫交互作用对土壤活性碳氮和温室气体排放的影响

采用3因素2水平交互设计室内恒温培养试验,通过调控秸秆施用、氮肥用量及食细菌线虫,探讨三者对土壤微生物生物量碳氮(C_mic和N_mic)、可溶性碳氮(DOC、DON)、矿质氮(NH₄⁺-N和NO₃^--N)及温室气体排放(CO₂、N₂O和CH₄)的交互影响.结果表明： 施用秸秆显著增加了食细菌线虫数量、C_mic和N_mic,而随着氮肥用量增加,C_mic和N_mic降低,食细菌线虫对C_mic和N_mic的影响则依赖于秸秆和氮肥用量.秸秆、氮肥和食细菌线虫对可溶性碳氮和矿质氮表现出强烈的交互作用,其中秸秆和氮肥均增加了DOC、NH₄⁺ -N和NO₃^--N;食细菌线虫对DOC的抑制作用和对矿质氮的促进作用达到显著水平.秸秆处理对CO₂、N₂O的促进及对CH₄的抑制均达到显著水平,而线虫和氮肥的影响则更多表现出交互作用.在培养第56天,有秸秆时,低量氮肥下食细菌线虫显著促进了CO₂的排放,而高量氮肥下则表现出对CO₂和N₂O显著的抑制作用.总之,土壤生态功能的发挥不可忽视土壤动物的作用.     

Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment

Oxidation of ammonia by nitrifying microorganisms is a major pathway that fertilizer nitrogen (N) may take upon application to agricultural soils, but the relative roles of bacterial (AOB) vs. archaeal (AOA) ammonia oxidizers are controversial. We explored the effects of various forms of mineral N fertilizer on the AOB and AOA community dynamics in two different soils planted with barley. Ammonia oxidizers were monitored via real-time PCR and terminal restriction fragment length polymorphism analysis of bacterial and archaeal amoA genes following the addition of either [NH?]?SO?, NH?NO? or KNO?. AOB and AOA communities were also studied specifically in the rhizospheres of two different barley varieties upon [NH?]?SO? vs. KNO? addition. AOB changed in community composition and increased in abundance upon ammonium amendment in bulk soil and rhizosphere, with changes in bacterial amoA copy numbers lagging behind relative to changes in soil ammonium. In both soils, only T-RFs corresponding to phylotypes related to Nitrosospira clade 3a underwent significant community changes. Increases in AOB abundance were generally stronger in the bulk soil than in the rhizosphere, implying significant ammonia uptake by plant roots. AOA underwent shifts in the community composition over time and fluctuated in abundance in all treatments irrespective of ammonia availability. AOB were thus considered as the main agents responsible for fertilizer ammonium oxidation, while the functions of AOA in soil N cycling remain unresolved.     

西藏中部地区退化土壤秸秆还田的微生物变化特征及其影响

于西藏中部地区秸秆还田条件下,研究了土壤微生物区系及其主要生理类群的变化特征和土壤微生物对土壤肥力的影响及其相互关系。结果表明,不同秸秆还田方式,特别是秸秆覆盖和高茬方式较高的土壤水分、土壤温度及其耦合效应,为土壤微生物繁殖与活动提供了重要的土壤环境保障,有助于以细菌为主导的各类土壤微生物的相对均衡生长,对加速土壤有机残体分解,大幅度提高土壤有机质含量,促进土壤团粒结构形成和土壤养分转化均具重要作用,表明在西藏中部生态条件下,退化土壤具有在相对较短时间内实现结构重建与肥力恢复的可能性及其潜力。     

Influence of an arbuscular mycorrhizal fungus on Pseudomonas fluorescens DF57 in rhizosphere and hyphosphere soil

The influence of Glomus intraradices (BEG87) on Pseudomonas fluorescens DF57 in hyphosphere and rhizosphere soil was examined. Cucumis sativus (Aminex, F₁ hybrid) was grown in symbiosis with the arbuscular mycorrhizal fungus G. intraradices in PVC tubes, consisting of a central root compartment and two lateral root-free compartments. Two Tn 5 - lux AB-marked strains of P. fluorescens DF57 were used. Strain DF57-P2, which has an insertion of Tn 5::lux AB in a phosphate starvation-inducible locus, was used as a phosphate starvation reporter. Another lux -tagged strain DF57-40E7, which carries a constitutively expressed lux AB fusion, was used as control for strain DF57-P2 and for measuring the metabolic activity of P. fluorescens DF57. A strain of P. fluorescens DF57, which carries a constitutively expressed gfp gene, was used in studies of attachment between the bacteria and the hyphae. G. intraradices decreased the culturability of P. fluorescens DF57 significantly, both in rhizosphere and hyphosphere soil, whereas the total number of P. fluorescens DF57 measured by immunofluorescence microscopy was decreased in hyphosphere soil only. G. intraradices did not induce a phosphorus starvation response in P. fluorescens DF57, and the metabolic activity of the bacteria was not affected by the fungus after 48 h. P. fluorescens DF57 did not attach to G. intraradices hyphae and was not able to use the hyphae as carbon substrate. The negative effect of G. intraradices on culturability and on number of P. fluorescens DF57 in hyphosphere soil is discussed.     

秸秆覆盖配施氮肥根际土真菌群落及其与小麦产量的关系

为研究秸秆覆盖与施氮条件下土壤真菌群落变化及其驱动因素与冬小麦产量的关系,试验采用二因素裂区设计,主区为秸秆覆盖（SM）和不覆盖（NSM）;副区为两种施氮量0（N0）和180（N1） kg/hm²。于小麦开花期采集土壤样品测定土壤养分及采用Illumina Miseq高通量测序技术分析根际真菌群落结构和多样性。结果表明,SM较NSM处理小麦产量提高40.3%,差异显著。NSMN1较NSMN0处理小麦产量显著提高75%;SMN1处理比SMN0处理小麦产量显著提高92%。SM处理较NSM处理土壤有机碳（SOC）、全氮（TN）、碱解氮（AN）、氨态氮（NH₄⁺-N）、速效磷（AP）和速效钾（AK）的含量显著增加,土壤硝态氮（NO₃^--N）含量降低。无论秸秆覆盖与否,施氮显著提高了土壤TN、AN、NH₄⁺-N、NO₃^--N、AP和AK的含量。秸秆覆盖根际真菌群落多样性（Chao1与Shannon指数）增加;施氮则降低其多样性。SM处理较NSM处理显著增加担子菌门（Basidiomycota）和降低被孢霉门（Mortierellomycota）的相对丰度,子囊菌门（Ascomycota）的相对丰度无显著差异。在NSM条件下,施氮显著增加子囊菌门的相对丰度,担子菌门与被孢霉门相对丰度显著降低;在SM条件下,施氮处理显著降低子囊菌门和增加担子菌门的相对丰度,被孢霉门的相对丰度降低,但无显著差异。在属水平上,SM处理较NSM处理显著增加光盖伞属（Psilocybe）、弯孢菌属（Curvularia）和黑孢霉属（Nigrospora）的相对丰度,被孢霉属（Mortierella）、球腔菌属（Mycosphaerella）、帚枝霉属（Sarocladium）、镰刀菌属（Fusarium）和柱霉属（Scytalidium）的相对丰度显著降低,蛋白单胞属（Pyrenochaetopsis）的相对丰度无显著差异。NSMN1较NSMN0处理显著增加球腔菌属、弯孢菌属和帚枝霉属的相对丰度,显著降低被孢霉属和柱霉属的相对丰度;SMN1比SMN0处理显著增加光盖伞属、弯孢菌属、帚枝霉属和柱霉属的相对丰度,被孢霉属相对丰度显著降低。组间群落差异（LEfSe）分析,球腔菌属、弯孢菌属和光盖伞属是秸秆覆盖配施氮肥的关键真菌菌属。基于冗余分析,土壤SOC、AK、AP、AN、TN与NH₄⁺-N含量对真菌群落结构有显著或者极显著的影响。进一步分析表明,在秸秆覆盖配施氮肥条件下光盖伞属、柱霉属和弯孢菌属与小麦产量相关。综上,秸秆覆盖配施氮肥有助于提高土壤养分有效性和小麦产量,利于优化土壤真菌群落结构,对四川丘陵旱地提升土壤肥力和作物生产力具有重要意义。