Electrochemical identification of microbially mediated hydrogen sulfide oxidation

The process of H₂S oxidation by the phototrophic bacteriaThiocapsa roseopersicina andChlorobium phaeobacteroides, respectively, was monitored using a Pt-glass-Ag⁰, Ag₂S electrode combination without liquid junction. Due to the resulting pe(pH) and pH₂S plottings three steps can be distinguished: oxidation of H₂S to an S(0) state, oxidation of S (0) to SO₄ ^2–, and oxidation of the remaining H₂S directly to SO₄ ^2–. Differences between the investigated bacteria exist with respect to their individual oxidation strategies.Thiocapsa apparently stops oxidizing H₂S at pH₂S 7.5 (e.g. 10^–7.5M H₂S) and shifts to the utilization of the intracellularly stored S (0). In contrastChlorobium utilizes its extracellularly stored sulfur parallel to the extracellular H₂S fraction. The corresponding Pt-sensor responses (pe₇ values) were found to be similar to the corresponding partial redox equilibria (p₇ values) of H₂S oxidation stoichiometries as proposed by Van Niel (1931) and Trüper (1964). It is concluded that the recording of pe enables investigators to understand (and control) in situ redox processes, independent of their thermodynamic equilibration, only bound to changes of electroactivity vs. sensor.     

Exchange of HCO 3 − for monovalent anions across the human erythrocyte membrane

Summary A stopped-flow rapid reaction apparatus was used for measuring changes in extracellular pH (pH _o ) of red cell suspensions under conditions wheredpH _o /dt was determined by the rate of HCO ₃ ^– /X ^– exchange across the membrane (X ^–=Cl^–, Br^–, F^–, I^–, NO ₃ ^– or SCN^–). The rate of the exchange at 37°C decreased forX ^– in the order: Cl^–>Br^–>F^–>I^–>NO ₃ ^– >SCN^–, with rate constants in the ratios 10.860.770.550.520.31. When HCO ₃ ^– is exchanged for Cl^–, Br^–, F^–, NO ₃ ^– or SCN^–, a change in the rate-limiting step of the process takes place at a transition temperature (T _T ) between 16 and 26°C. In I^– medium, however, no transition temperature is detected between 3 and 42°C. AlthoughT _T varies withX ^–, the activation energies both above and belowT _T are similar for Cl^–, Br^–, NO ₃ ^– and F^–. The values of activation energy are considerably higher whenX ^–=I^– or SCN^–. The apparent turnover numbers calculated for HCO ₃ ^– /X ^– exchange (except forX ^–=I^–) at the correspondingT _T ranged from 140 to 460 ions/site ·sec for our experimental conditions. These findings suggest that: (i) HCO ₃ ^– /X ^– exchange for allX ^– studied takes place via the rapid anion exchange pathway; (ii) the rate of HCO ₃ ^– /X ^– exchange is influenced by the specific anions involved in the 11 obligatory exchange; and (iii) the different transition temperatures in the Arrhenius diagrams of the HCO ₃ ^– /X ^– exchange do not seem to be directly related to a critical turnover number, but may be dependent upon the influence ofX ^– on protein-lipid interactions in the red blood cell membrane.     

Energetics and regulations of formate and hydrogen metabolism by Methanobacterium formicicum

Accumulation of formate to millimolar levels was observed during the growth of Methanobacterium formicicum species on H₂–CO₂. Hydrogen was also produced during formate metabolism by M. formicicum. The amount of formate accumulated in the medium or the amount H₂ released in gas phase was influenced by the bicarbonate concentration. The formate hydrogenlyase system was constitutive but regulated by formate. When methanogenesis was inhibited by addition of 2-bromoethane sulfonate, M. formicicum synthesized formate from H₂ plus HCO _inf3 ^sup- or produced H₂ from formate to a steady-state level at which point the Gibbs free energy (G) available for formate synthesis or H₂ production was approximately -2 to -3 kJ/reaction. Formate conversion to methane was inhibited in the presence of high H₂ pressure. The relative rates of conversion of formate and H₂ were apparently controlled by the G available for formate synthesis, hydrogen production, methane production from formate and methane production from H₂. Results from ¹⁴C-tracer tests indicated that a rapid isotopic exchange between HCOO^- and HCO _inf3 ^sup- occurred during the growth of M. formicicum on H₂–CO₂. Data from metabolism of ¹⁴C-labelled formate to methane suggested that formate was initially split to H₂ and HCO _inf3 ^sup- and then subsequently converted to methane. When molybdate was replaced with tungstate in the growth media, the growth of M. formicicum strain MF on H₂–CO₂ was inhibited although production of methane was not Formate synthesis from H₂ was also inhibited.     

Normal coordinate analyses of 3,5-dichlorophenylcyanamide

The structure of 3,5-dichlorophenylcyanamide c-C₆H₃Cl₂–NHCN was investigated by DFT-B3LYP and ab initio MP2 calculations with the 6-311+G** basis set. The planar to perpendicular rotational barrier was calculated to be of about 5 kcal mol^–1 at both levels of calculation. The stability of the planar structure of the molecule was explained on the basis of conjugation effects between the cyanamide–NHCN moiety and the phenyl c-C₆H₅ ring in agreement with earlier NMR results. The CNC and the HNC bond angles were calculated to be about 120° especially by MP2 calculation, which is consistent with sp² (planar –NH–CN group) and not sp³ (pyramidal –NH–CN group) structure. The vibrational frequencies of the d₀, d₁ and d₃ species of 3,5-dichlorophenylcyanamide and the potential energy distributions among symmetry coordinates of the normal modes of the parent molecule were computed at the DFT-B3LYP level. The calculated infrared and Raman spectra of the molecule were plotted. Complete vibrational assignments were made on the basis of isotopic substitution and normal coordinate calculations.Figure Potential curves for the internal rotation in 3,5-dichlorophenylcyanamide as determined by DFT-B3LYP/6-311+G** (solid) and MP2/6-311+G** (dotted) calculations     

Paramagnetic spin catalysis of a radical recombination reaction

Recombination of the triplet state radical pair consisting of two hydrogen atoms catalysed by molecular oxygen is considered as a simulating example of a paramagnetic-exchange catalytic process. Intermolecular exchange interaction in the collision complex between the H₂ and O₂ molecules is calculatedab initio in STO-6G and 6–31 G^* basis sets with complete active space configuration interaction. Calculations are done at a fixed O–H distance (3 Å), scanning the H–H bond length from 0.6 till 12 Å at the linear geometry of collision. The mixture of the triplet (T)³ _u ⁺ and singlet (S)¹ _g ⁺ states of the hydrogen moiety is possible because both states have the same triplet symmetry in the collision complex with O₂ (³ _g ^– ). A strong mixture of the S (¹ _g ⁺ , H₂ +³ _g ^– , O₂) and T) and T (³ _u ⁺ , H₂ +³ _g ^– , O₂) states is actually obtained even at large H–H distances. The quintet and singlet states^5,1(³ _u ⁺ , H₂ +³ _g ^– , O₂) are also considered for comparison of the exchange potentials. Atr(H–H)4.4 Å the S-T splitting is approximately constant (12 cm^-1 in the STO-6G basis set; 55.5 cm^-1 in the 6–31 G^* basis set) and is determined by the exchange interaction between O₂ and the nearest hydrogen atom in the O–O...H fragment. The paramagnetic catalyst can accelerate radical recombination through the triplet-singlet nonadiabatic transition to the lowest S reactive state when the radical encounter takes place in the vicinity of the catalyst. Though we do not consider the radical dynamics in a real solvent, which modulates the exchange potentials and the T-S transitions, the nature of this mechanism of spin catalysis is obvious. The electric polarization and charge transfer are important in the analysis of the exchange interaction and radical recombination potentials for all multiplets. In accordance with the concept of spin catalysis, the electronic spin-uncoupling mechanism, induced by O₂ perturbation, has the same nature as other known catalytic processes of paramagnetic-exchange type.     

Modelling continuous culture of Rhodospirillum rubrum in photobioreactor under light limited conditions

Rhodospirillum rubrum was grown continuously and photoheterotrophically under light limitation using a cylindrical photobioreactor in which the steady state biomass concentration was varied between 0.4 to 4 kg m^–3 at a constant radiant incident flux of 100 W m^–2. Kinetic and stoichiometric models for the growth are proposed. The biomass productivities, acetate consumption rate and the CO₂ production rate can be quantitatively predicted to a high level of accuracy by the proposed model calculations. Nomenclature: C _X, biomass concentration (kg m^–3) D, dilution rate (h^–1) Ea, mean mass absorption coefficient (m² kg^–1) I , total available radiant light energy (W m^–2) K, half saturation constant for light (W m^–2) R _W, boundary radius defining the working illuminated volume (m) r _X, local biomass volumetric rate (kg m^–3 h^–1) <r _X>, mean volumetric growth rate (kg m^–3 h^–1) V _W, illuminated working volume in the PBR (m^–3). Greek letters: , working illuminated fraction (–) _M, maximum quantum yield (–) bar, mean energetic yield (kg J^–1).     

Developmental changes in the calcium currents in embryonic chick ventricular myocytes

Summary Using the patch-clamp technique, we recorded whole-cell calcium current from isolated cardiac myocytes dissociated from the apical ventricles of 7-day and 14-day chick embryos. In 70% of 14-day cells after 24 hr in culture, two component currents could be separated from totalI _Ca activated from a holding potential (V _h) of –80 mV. L-type current (I _L) was activated by depolarizing steps fromV _h –30 or –40 mV. The difference current (I _T) was obtained by subtractingI _L, fromI _Ca.I _T could also be distinguished pharmacologically fromI _L in these cells.I _T was selectively blocked by 40–160 m Ni²⁺, whereasI _L was suppressed by 1 m D600 or 2 m nifedipine. The Ni²⁺-resistant and D600-resistant currents had activation thresholds and peak voltages that were near those ofI _T andI _L defined by voltage threshold, and resembled those in adult mammalian heart. In 7-day cells,I _T andI _L could be distinguished by voltage threshold in 45% (S cells), while an additional 45% of 7-day cells were nonseparable (NS) by activation voltage threshold. Nonetheless, in mostNS cells,I _Ca was partly blocked by Ni²⁺ and by D600 given separately, and the effects were additive when these agents were given together. Differences among the cells in the ability to separateI _T andI _L by voltage threshold resulted largely from differences in the position of the steady-state inactivation and activation curves along the voltage axis. In all cells at both ages in which the steady-state inactivation relation was determined with a double-pulse protocol, the half-inactivation potential (V _1/2) of the Ni²⁺-resistant currentI _L averaged –18 mV. In contrast,V _1/2 of the Ni²⁺-sensitiveI _T was –60 mV in 14-day cells, –52 mV in 7-dayS cells, and –43 mV in 7-day NS cells. The half-activation potential was near –2 mV forI _L at both ages, but that ofI _T was –38 mV in 14-day and –29 mV in 7-day cells. Maximal current density was highly variable from cell to cell, but showed no systematic differences between 7-day and 14-day cells. These results indicate that the main developmental change that occurs in the components ofI _Ca is a negative shift with, embryonic age in the activation and inactivation relationships ofI _T along the voltage axis.     

Anthraquinones production,hydrogen peroxide level and antioxidant vitamins in Morinda elliptica cell suspension cultures from intermediary and production medium strategies

The effects of medium strategies [maintenance (M), intermediary (G), and production (P) medium] on cell growth, anthraquinone (AQ) production, hydrogen peroxide (H₂O₂) level, lipid peroxidation, and antioxidant vitamins in Morinda elliptica cell suspension cultures were investigated. These were compared with third-stage leaf and 1-month-old callus culture. With P medium strategy, cell growth at 49 g l^–1, intracellular AQ content at 42 mg g^–1 DW, and H₂O₂ level at 9 mol g^–1 FW medium were the highest as compared to the others. However, the extent of lipid peroxidation at 40.4 nmol g^–1 FW and total carotenoids at 13.3 mg g^–1 FW for cultures in P medium were comparable to that in the leaf, which had registered sevenfold lower AQ and 2.2-fold lower H₂O₂ levels. Vitamin C content at 30–120 g g^–1 FW in all culture systems was almost half the leaf content. On the other hand, vitamin E content was around 400–500 g g^–1 FW in 7-day-old cultures from all medium strategies and reduced to 50–150 g g^–1 FW on day 14 and 21; as compared to 60 g g^–1 FW in callus and 200 g g^–1 FW in the leaf. This study suggests that medium strategies and cell growth phase in cell culture could influence the competition between primary and secondary metabolism, oxidative stresses and antioxidative measures. When compared with the leaf metabolism, these activities are dynamic depending on the types and availability of antioxidants.Abbreviations AQ Anthraquinone - DW Dry cell weight - FW Fresh cell weight - G Intermediary medium - M Maintenance medium - MDA Malondialdehyde - P Production medium - ROS Reactive oxygen species - TBA Thiobarbituric acid - t_d Doubling time     

Optimal control strategy for the enhanced production of cellulase enzyme using the new mutant Trichoderma reesei E-12

Cellulase enzyme production was enhanced using the mutant strain Trichoderma reesei, E-12, which was shown to be partially resistant to catabolite repression. An optimal profile for pH, which was found to be the critical environmental parameter, was determined using a rigorous mathematical optimization procedure. Semi-empirical models were used to minimize complications in the computation. A 30% increase in enzyme activity and productivity was obtained using the optimal pH strategy as compared to the pH cycling strategy.List of Symbols a ₁ , a ₂ , a ₃ d^–1, d^–2, d^–3 coefficients of the polynomial in the generalized logistic growth model - a ₄, a ₅, a ₆ d^–1, d^–2, d^–3 coefficients of the polynomial in the generalized logistic product model - b ₁ d^–1 enzyme synthesis rate constant - b ₂ d ^–1 enzyme decay rate constant - b ₃ power coefficient in the polynomial model for enzyme synthesis - H Hamiltonian function - J Objective function of the maximization procedure - K ₁ kg/m³ limiting cell mass concentration in biomass logistic model - K _s kg/m³ saturation constant - K ^s kg/m³ saturation death rate constant - q power coefficient in polynomial model - s kg/m³ substrate concentration - t d fermentation time - T d total fermentation time (=7 d) - x ₁₀ kg/m³ initial biomass concentration - x ₁ kg/m³ biomass concentration at time t - x ₂ F.P.A enzyme activity at time t - x ₃ d state variable replacing time term on the right hand side of biomass equation - x _f kg/m³ final biomass concentration - z ₁, z ₂, z ₃ adjoint variable corresponding to state variable x ₁, x ₂, x ₃ - d^–1 specific death rate - d^–1 specific growth rate     

Indigo production in hairy root cultures of Polygonum tinctorium Lour.

The transformed root culture of Polygonum tinctorium Lour. was established by infecting leaf explants with Agrobacterium rhizogenes A4. These cultures were examined for their growth and indigo content under various culture conditions. Among the four different culture media tested, SH medium showed the highest yield for root growth (28 mg dry wt/30 ml) and indigo production (152 g/dry wt). In SH medium, 30 g sucrose l^–1, 2500 mg KNO₃ l^–1, 300 mg NH₄H₂PO₄ l^–1 were the best conditions for indigo production at pH 5.7. The production of indigo in hairy roots slightly increased with the addition of 200 mg chitosan l^–1 (186 g/dry wt) and 20 U pectinase l^–1 (181 g/dry wt).     

Growth simulation ofHansenula polymorpha

Summary Using the model presented in part I, the measured time and spacial variations of process variables were simulated with satisfactory accuracy. Especially the experimentally found minima of the longitudinal dissolved oxygen concentration profiles in the substrate limiting growth range, which are caused by the transition from oxygen transfer limited to substrate limited growth along the tower, can be simulated with great accuracy.Symbols L length - M mass - T time - K temperature - M_M mole mass - a Specific gas/liquid interfacial area with regard to the liquid volume in the tower (L^–1) - DS_R Substrate feed rate (ML^–3T^–1) - K_O Saturation constant of Monod kinetics with regard to oxygen (ML^–3) - K_S Saturation constant of Monod kinetics with regard to the substrate (ML^–3) - K_ST Constant - K_L Mass transfer coefficient (LT^–1) - k_La Volumetric mass transfer coefficient (T^–1) - k_La^E Volumetric mass transfer coefficient at the entrance (T^–1) - k_La Volumetric mass transfer coefficient at large distances from the entrance (T^–1) - k_La ₀ Volumetric mass transfer coefficient in the absence of substrate (ethanol) (T^–1) - L_R Gas-liquid layer height in the tower (L) - L_R Height of the loop (L) - - O_B Dissolved oxygen concentration in the loop liquid (ML^–3) - O_F Dissolved oxygen concentration in the tower liquid (ML^–3) - O _F ^* Saturation value of O_F (ML^–3) - OTR Oxygen transfer rate (ML^–3T^–1) - P Pressure - Oxygen transfer rate (ML^–3T) - S_B Substrate concentration in the loop liquid (ML^–3) - S_D Substrate concentration at which k_La=2 k_La ₀ (ML^–3) - S_F Substrate concentration in the tower liquid (ML^–3) - T Absolute temperature - t Time (T) - u_Go Superficial gas velocity in the tower - V_R Reactor volume (L³) - V_G Volumetric gas flow rate in the tower (L³T^–1) - V_B Volumetric liquid flow rate in the loop (L³T^–1) - V_F Volumetric liquid flow rate in the tower (L³T^–3) - V_u Liquid recycling rate (L³T^–1) - X_B Biomass concentration in the loop liquid (ML^–3) - X_F Biomass concentration in the tower liquid (ML^–3) - x Longitudinal coordinate in the tower (L) - x^* Longitudinal coordinate in the loop (L) - x_OG O₂ mole fraction in the gas phase - Y_X/O Yield coefficient of biomass with regard to oxygen - Y_X/S Yield coefficient of biomass with regard to substrate - z=x/L_R Dimensionless longitudinal coordinate in the tower - z^*=x^*/L_B Dimensionless longitudinal coordinate in the loop - Constant (L_R is the distance from the aerator on which k_L a is space dependent) - Liquid recirculation ratio - _G Mean relative gas holdup in the tower - _exp Experimentally determined (T^–1) - _max Maximum specific growth rate (T^–1) - _F Liquid density (ML^–3) - A At the exit - E At the inlet     

Changes in the Photosynthetic Apparatus of Broad Bean Leaves as Dependent on the Content of Heavy Metals in the Growth Medium

The content of chlorophyll, the rate of O₂ evolution, the slow phase of fluorescence induction, and photoinduced changes in the intensity of electron paramagnetic resonance (EPR) signal I from the reaction center of photosystem I (P⁺700) were studied in leaves of Vicia faba L. grown in 10^–7–10^–3 M aqueous solutions of CdCl₂, SnCl₂, CuCl₂, and MgCl₂. At low concentrations of heavy metal (Cd, Sn, and Cu) chlorides, the content of chlorophyll per fresh weight decreased. However, the rate of O₂ evolution calculated per chlorophyll basis, O₂/(t chlorophyll), increased. High concentrations of heavy metals significantly suppressed plant development and inhibited photosynthetic O₂ evolution. In contrast, plant treatment with MgCl₂ (10^–5–10^–3 M) resulted in an increase in the content of chlorophyll and a stimulation of leaf photosynthetic activity. A positive correlation between the F _M/F _T ratio and O₂/(t chlorophyll) (r = 0.89, P > 0.999) was found. We observed a negative correlation between the values of P/P ₀ of EPR signal I (white/far-red light) and O₂/(tchlorophyll) (r = –0.89, P > 0.999). The data obtained indicate nonspecific and nonmonotone changes in the photosynthetic apparatus of plants treated with heavy metals: low concentrations of heavy metals (10^–7–10^–6 M) stimulated photosynthetic activity, whereas high concentrations (10^–4–10^–3 M) suppressed it.     

Preparative electrophoresis: on the estimation of maximum temperature

The quantity of proteins processed by an electrophoretic technique is proportional to the cross-sectional area of the gel. For preparative purifications, an increase in the cross-sectional area is desired, but the Joule heating phenomenon restricts such an increase. The governing heat equation is analyzed and simplified with reference to Counteracting Chromatographic Electrophoresis. The application of the method of weighted residuals yields a compact and accurate solution for the maximum temperature rise in the column which is suitable for design calculations. Similar estimations indicate the efficiency of heat dissipation in annular configuration.List of Symbols C _p specific heat capacity, J g^–1 K^–1 - h heat transfer coefficient at the wall, W cm^–2K^–1 - i current density, A cm^–2 - k effective thermal conductivity of the packing, W cm^–1 K^–1 - k _b electrical conductivity of the buffer, mho cm^–1 - k _e effective electrical conductivity of the packing, mho cm^–1 - k _g electrical conductivity of the gel, mho cm^–1 - L length of the packing, cm - N _Pr Prandtl number - N _Re Reynolds number - r radial coordinate, cm - r _i inner radius of annulus, cm - r _o outer radius of annulus, cm - S heat source term, defined by eqn. (6) - T temperature, K - T _c cooling fluid temperature, K - T _i initial temperature, K - T _max highest temperature in the column, K - u superficial buffer velocity, cm s^–1 - V voltage gradient, V cm^–1 - porosity of the packing, dimensionless - buffer density, g cm^–3 - temperature, dimensionless Material presented in this paper has been adapted from the author's dissertation [15] which was accepted (supervisor: Dr. Jean B. Hunter) by the Cornell University Graduate Faculty in partial requirement of a graduate degree. Thoughtful discussions with Professors J. Robert Cooke and Michael L. Shuler regarding the annulus problem and the financial support provided by the Department of Agricultural and Biological Engineering, Cornell University, Ithaca, USA are gratefully appreciated.     

H2 oxidation,O2 uptake and CO2 fixation in hydrogen treated soils

In many legume nodules, the H₂ produced as a byproduct of N₂ fixation diffuses out of the nodule and is consumed by the soil. To study the fate of this H₂ in soil, a H₂ treatment system was developed that provided a 300 cm³ sample of a soil:silica sand (2:1) mixture with a H₂ exposure rate (147 nmol H₂ cm^–3hr^–1) similar to that calculated exist in soils located within 1–4 cm of nodules (30–254 nmol H₂ cm^–3hr^–1). After 3 weeks of H₂ pretreatment, the treated soils had a K_m and V_max for H₂ uptake (1028 ppm and 836 nmol cm^–3 hr^–1, respectively) much greater than that of control, air-treated soil (40.2 ppm and 4.35 nmol cm^–3 hr^–1, respectively). In the H₂ treated soils, O₂, CO₂ and H₂ exchange rates were measured simultaneously in the presence of various pH₂. With increasing pH₂, a 5-fold increase was observed in O₂ uptake, and CO₂ evolution declined such that net CO₂ fixation was observed in treatments of 680 ppm H₂ or more. At the H₂ exposure rate used to pretreat the soil, 60% of the electrons from H₂ were passed to O₂, and 40% were used to support CO₂ fixation. The effect of H₂ on the energy and C metabolism of soil may account for the well-known effect of legumes in promoting soil C deposition.     

Optimal temperature and concentration profiles in a cascade of CSTR's performing Michaelis-Menten reactions with first order enzyme deactivation

A necessary condition is found for the intermediate temperatures and substrate concentrations in a series of CSTR's performing an enzyme-catalyzed reaction which leads to the minimum overall volume of the cascade for given initial and final temperatures and substrate concentrations. The reaction is assumed to occur in a single phase under steady state conditions. The common case of Michaelis-Menten kinetics coupled with first order deactivation of the enzyme is considered. This analysis shows that intermediate stream temperatures play as important a role as intermediate substrate concentrations when optimizing in the presence of nonisothermal conditions. The general procedure is applied to a practical example involving a series of two reactors with reasonable values for the relevant five operating parameters. These parameters are defined as dimensionless ratios involving activation energies (or enthalpy changes of reaction), preexponential factors, and initial temperature and substrate concentration. For negligible rate of deactivation, the qptimality condition corresponds to having the ratio of any two consecutive concentrations as a single-parameter increasing function of the previous ratio of consecutive concentrations.List of Symbols C _E,0 mol.m^–3 Initial concentration of active enzyme - C _E,i mol.m^–3 Concentration of active enzyme at the outlet of the i-th reactor - C _S,0 mol.m^–3 Initial concentration of substrate - C _S,i mol.m^–3 Concentration of substrate at the outlet of the i-th reactor - Da _i Damköhler number associated with the i-th reactor ((V _i.k_v,0.C_E,0)/(Q.C_S,0)) - Da _min Minimum value of the overall Damköhler number - Da _tot Overall Damköhler number - E _d J.mol^–1 Activation energy of the step of deactivation of the enzyme - E _m J.mol^–1 Standard enthalpy change of the step of binding of substrate to the enzyme - E _v J.mol^–1 Activation energy of the step of enzymatic transformation of substrate - i Integer variable - j Dummy integer variable - k Dummy integer variable - k _d,i s^–1 Kinetic constant associated with the deactivation of enzyme in the i-th reactor (k _d,o·exp{–E _d/(R.T _i}) - k _d,0 s^–1 Preexponential factor of the kinetic constant associated with the deactivation of the enzyme - K _m,i mol.m^–3 Equilibrium constant associated with the binding of substrate to the enzyme in the i-th reactor, (k _m,o·exp{–E _m}(R.T _i}) - K _m,0 mol.m^–3 Preexponential factor of the Michaelis-Menten constant associated with the binding of substrate to the enzyme - k _v,i s^–1 Kinetic constant associated with the transformation of the substrate by the enzyme in the i-th reactor (k _v,o·exp{–E _v/(R.T _i})) - k _v,0 s^–1 Preexponential factor of the kinetic constant associated with the transformation of the substrate by the enzyme - N Number of reactors in the series - Q m³.s^–1 Volumetric flow rate of reacting liquid through the reactor network - R J.K^–1.mol^–1 Ideal gas constant - T _i K Absolute temperature at the outlet of the i-th reactor - T ₀ K Initial absolute temperature - V _i m³ Volume of the i-th reactor - v _max mol.m^–3.s^–1 Maximum rate of reaction under saturation conditions of substrate - x _i Normalized concentration of substrate (C_S,i/C_{S, 0}) - x _i,opt Optimum value of the normalized concentration of substrate - y _i Dimensionless temperature (exp{–T ₀/T _i}) - y _i,opt Optimum value of the dimensionless temperature Greek Symbols Dimensionless preexponential factor associated with the Michaelis-Menten constant (K _m,0/C_s,0) - Dimensionless activation energy of the step of enzymatic transformation of substrate (E _v/R.T₀)) - Dimensionless standard enthalpy change of the step of binding of substrate to the enzyme (E _m/(R.T₀)) - Dimensionless activation energy of the step of deactivation of the enzyme (E _d/(R.T₀)) - Dimensionless deactivation preexponential factor ((k _d,0.C_S,0)/(k_v,0.C_E,0)     

Na/H exchange in cultured epithelial cells from fish gills

Using primary cultures of gill pavement cells from freshwater rainbow trout, a method is described for achieving confluent monolayers of the cells on glass coverslips. A continuous record of intracellular pH was obtained by loading the cells with the pH-sensitive flourescent dye 2,7-bis(2-carboxyethyl)-5(6)-carboxyfluorescein and mounting the coverslips in the flowthrough cuvette of a spectrofluorimeter. Experiments were performed in HEPES-buffered media nominally free of HCO₃. Resting intracellular pH (7.43 at extracellular pH=7.70) was insensitive to the removal of Cl^– or the application of 4-acetamido-4-isothiocyanatostilbene-2,2-disulfonic acid (0.1 mmol·l^–1), but fell by about 0.3 units when Na⁺ was removed or in the presence of amiloride (0.2 mmol·l^–1). Exposure to elevated ammonia (ammonia prepulse; 30 mmol·l^–1 as NH₄Cl for 6–9 min) produced an increase in intracellular pH (to about 8.1) followed by a slow decay, and washout of the pulse caused intracellular pH to fall to about 6.5. Intracellular non-HCO ₃ ^– buffer capacity was about 13.4 slykes. Rapid recovery of intracellular pH from intracellular acidosis induced by ammonia prepulse was inhibited more than 80% in Na⁺-free conditions or in the presence of amiloride (0.2 mmol·l^–1). Neither bafilomycin A₁ (3 mol·l^–1) nor Cl removal altered the intracellular pH recovery rate. The K _m for Na⁺ of the intracellular pH recovery mechanism was 8.3 mmol·l^–1, and the rate constant at V _max was 0.008·s^–1 (equivalent to 5.60 mmol H⁺·l^–1 cell water·min^–1), which was achieved at external Na⁺ levels from 25 to 140 mmol·l^–1. We conclude that intracellular pH in cultured gill pavement cells in HEPES-buffered, HCO ₃ ^– -free media, both at rest and during acidosis, is regulated by a Na⁺/H⁺ antiport and not by anion-dependent mechanisms or a vacuolar H⁺-ATPase.Abbreviations BCECF 2,7-bis(2-carboxyethyl)-5(6)-carboxy-fluorescein - BCECF/AM 2,7-bis(2-carboxyethyl)-5(6)-carboxy-fluorescein, acetoxymethylester - Cholin-Cl choline chloride - DMSO dimethyl sulfoxide - EDTA ethylene diamine tetra-acetic acid - FBS foetal bovine serum - H ⁺ -ATPase Proton-dependent adenosine triphosphatase - HEPES N-[2-hydroxyethyl]piperazine-N[2-ethanesulfonic acid] - pH _i intracellular pH - pH _e extracellular pH - PBS phosphate-buffered saline - SITS 4-acetamido-4-isothiocyanatostilbene-2,2-disulfonic acid     

Physiological responses to water stress in<Emphasis Type="Italic"> Eucalyptus cloeziana</Emphasis> and<Emphasis Type="Italic"> E. argophloia</Emphasis> seedlings

Effects of water stress duration and intensity on gas exchange and leaf water potential were investigated in 7-month-old seedlings of a humid coastal provenance (Gympie) and a dry inland (Hungry Hills) provenance of E. cloeziana F. Muell. and in a dry inland (Chinchilla) provenance of E. argophloia Blakely supplied with 100% (T₁₀₀), 70% (T₇₀), 50% (T₅₀) of their water requirements, or were watered only after they were wilted at dawn (T₀). Seedlings of E. argophloia had the highest midday net photosynthetic rate (A), stomatal conductance (g _s), stomatal density and predawn leaf water potential (_pd) in all treatments. The E. cloeziana provenances did not differ in these attributes. The T₇₀ and T₅₀ treatments caused reductions in A of 30% in E. argophloia, and 55% in the E. cloeziana provenances. Under the T₀ treatment, E. argophloia maintained higher rates of gas exchange at all levels of water stress than E. cloeziana provenances. The estimates of _pd and midday water potential (_md) at which plants remained wilted overnight were respectively: –2.7 and –4.1 MPa for E. cloeziana (humid), –2.8 and –4.0 MPa for E. cloeziana (dry) and, –3.7 and –4.9 MPa for E. argophloia. Following stress relief, both A and g _s recovered more quickly in E. argophloia and in the dry provenance of E. cloeziana than in the humid provenance. We conclude that E. argophloia is more drought tolerant and has a potential for cultivation in the humid and semi humid climates, whilst E. cloeziana has greater potential in the humid subtropical climates.     

Gas chromatographic–mass spectrometric determination of α-ketoisocaproic acid and [H7]α-ketoisocaproic acid in plasma after derivatization with N-phenyl-1,2-phenylenediamine

A method for determination of α-ketoisocaproic acid (KIC) and [4,5,5,5,6,6,6-²H₇]α-ketoisocaproic acid ([²H₇]KIC) in rat plasma was developed using gas chromatography–mass spectrometry-selected ion monitoring (GC–MS-SIM). [5,5,5-²H₃]α-Ketoisocaproic acid ([²H₃]KIC) was used as an analytical internal standard to account for losses associated with the extraction, derivatization and chromatography. The keto acids were extracted by cation-exchange chromatography using BondElut SCX cartridge and derivatized with N-phenyl-1,2-phenylenediamine to form N-phenylquinoxalinone derivatives. Quantitation was performed by SIM of the respective molecular ions at m/z 278, 281 and 285 for the derivatives of KIC, [²H₃]KIC and [²H₇]KIC on the electron impact method. The limit of detection was found to be 70 fmol per injection (S/N=3) and the limit of quantitation for [²H₇]KIC was around 50 nM in rat plasma. Endogenous KIC concentrations in 50 μl of rat plasma were measured with relative intra- and inter-day precision of 4.0% and 3.3%, respectively. The intra- and inter-day precision for [²H₇]KIC spiked to rat plasma in the range of 0.1 to 10 μM gave good reproducibility with relative standard deviation (RSD) of 6.5% and 5.4%, respectively. The intra- and inter-day relative errors (RE) for [²H₇]KIC were less than 6.4% and 3.8%, respectively. The method was applied to determine the plasma concentration of [²H₇]KIC after an intravenous administration of [²H₇]KIC in rat.     

Simultaneous measurement of ammonium,nitrate and proton fluxes along the length of eucalypt roots

Knowledge of the preferred source of N for Eucalyptus nitens will lead to improved fertiliser management practices in plantations. Ion selective microelectrodes were used non-invasively to measure simultaneously net fluxes of NH₄ ⁺, NO₃ ^– and H⁺ along the tap root of solution-cultured E. nitens. Measurements were conducted in solutions containing 100 m NH₄NO₃. The pattern of fluxes was such that there was a large influx of NH₄ ⁺, a smaller influx of NO₃ ^– and large H⁺ efflux. The ratio of these fluxes was constant, according to the ratio 3:1:–6 (NH₄ ⁺:NO₃ ^–:H⁺). Within the region 20–60 mm from the root apex of E. nitens seedlings there was spatial and temporal variation in fluxes but flux patterns remained constant. Root hair density did not affect fluxes nor did proximity to lateral roots. Variation was less than that found in previous studies of localised root fluxes using similar high-resolution measurement techniques. It was concluded that small-scale spatial variation in fluxes may have confounded previous studies. There were associations between fluxes of all three ions, the strongest associations being between NH₄ ⁺ and H⁺, and NH₄ ⁺ and NO₃ ^–. Overall, these results are consistent with NH₄ ⁺ being the preferred source N for E. nitens.     

Chemical enthalpy-entropy compensation effect in the hydrolysis of p-nitrophenyl carboxylates catalyzed by alkaline mesentericopeptidase

The temperature dependence of the hydrolysis of p-nitrophenyl carboxylates with general formula H(CH₂)_nCOOC₆H₄NO₂ catalyzed by alkaline mesentericopeptidase has been studied (n varying from 1 to 7, temperature range 2–30°C, pH 8.80, 5 vol% dimethylsulfoxide). The activation parameters of the deacylation step depend on the length of the hydrophobic side chain of the substrate molecule ( , , and decrease by 2.0 kcal/mol, 4.9 kcal/mol, and 10 eu, respectively, as the length of the acyl carbon chain increases from n = 1 to n = 4). The following criteria were applied to establish a chemical enthalpy-entropy compensation effect: (a) Exner's plot of log vs : (b) Petersen's plot of log, k/T vs 1/T; (c) Exner's statistical treatment in coordinates log k vs 1/T; (d) according to Krug et al. (ΔH^≠ vs ΔG_Thm^≠). By use of all the above-mentioned criteria the existence of a chemical enthalpy-entropy compensation effect was proved with an isokinetic temperature β of about 470°K, which is significantly higher than the average experimental temperature.