染色质在非洲爪蟾卵的无细胞系统中形成组装核的研究

从大鼠肝、鸡肝提取了染色质并从受精未孵育鸡蛋胚下表层卵黄颗粒提取了染色质,在荧光显微镜和电子显微镜下观察了这些染色质在无细胞系统中形成的组装核;研究二阶钙镁离子对形成组装核的影响。在有ＡＴＰ再生系统存在的无细胞系统中,围绕染色质能形成与间期细胞核相似的组装核;二价钙离子不利于形成组装核,而二价镁离子是形成组装核所必须的,但过高浓度的镁离子对形成组装核有抑制作用。     

体外细胞核组装中核纤层与核膜的关系

采用非洲爪蟾卵提取物非细胞体系,以外源Lambda DNA诱导细胞核的体外组装,以此实验模式为基础,研究了细胞核体外组装过程中核纤层的组装,结果表明核纤层蛋白参与细胞核的体外组装过程,核内骨架的组装与核纤层的组装在时间上是有序的,核内骨架的组装可能为核纤层的装配提供了先决条件.在非洲爪蟾卵提取物非细胞体系中加入抗核纤层蛋白抗体,抑制核纤层的正常装配过程,核膜组装发生异常.结果提示核纤层的组装与核膜的组装是密切相关的.     

综述: 组蛋白变体的染色质组装

真核细胞的染色质组装是组蛋白和DNA有序地形成核小体和染色质的过程．通过调节DNA的开放或折叠状态,染色质组装不但影响遗传信息的编码和存储,也决定了遗传信息的提取和解读．作为染色质组装的重要调控因子,组蛋白变体和组蛋白伴侣在与DNA相关的生命活动进程中发挥着至关重要的作用．本文综述了组蛋白变体H2A.Z以及CENP-A进行染色质组装的研究进展,并着重讨论了组蛋白变体和组蛋白伴侣在染色质组装中的重要作用．     

真核细胞的中间纤维结构、组装和功能的研究

在真核细胞中普遍存在中间纤维(IF),不同类细胞的中间纤维都有相似的“头部 1A L1 1B L1-2 2A L2 2B 尾部”结构,其中：头部有一个β—折叠区,1A上有七个残基的亚结构,1B和2A L2 2B上有规则的轴向排列的氨基酸残基,2B的铲螺旋C末端有一个高度保守的氨基酸残基框,这些结构都有其独特的功能。各种IF组装方式不同,但至少都经历了非纤维性颗粒、波形短纤维和长纤维的形态变化过程。研究发现,IF具有阻止细胞凋亡的功能;在细胞凋亡过程中IF发生磷酸化和降解;细胞质中间纤维(CIF)在染色质一核纤层／CIF结合中发挥DNA选择功能。     

组蛋白变体的染色质组装

真核细胞的染色质组装是组蛋白和DNA有序地形成核小体和染色质的过程.通过调节DNA的开放或折叠状态,染色质组装不但影响遗传信息的编码和存储,也决定了遗传信息的提取和解读.作为染色质组装的重要调控因子,组蛋白变体和组蛋白伴侣在与DNA相关的生命活动进程中发挥着至关重要的作用.本文综述了组蛋白变体H2A.Z以及CENP-A进行染色质组装的研究进展,并着重讨论了组蛋白变体和组蛋白伴侣在染色质组装中的重要作用.     

体外组装含有组蛋白变体H2A.Z及H3.3的核小体

核小体是构成真核生物染色质的基本结构单位,组蛋白变体H2A.Z及H3.3对染色质结构及基因转录过程发挥着重要的调控作用。体内研究核小体及染色质结构受到诸多因素限制,体外重构含有H2A.Z及H3.3的核小体结构是研究与组蛋白变体相关基因表达调控的重要方法之一。实验表达纯化了6种组蛋白,在复性的过程中装配了含有H2A.Z和H3.3的组蛋白八聚体。基于DNA序列10bp周期性及序列模体设计了3条易于形成核小体的DNA序列,通过PCR大量扩增的方法,回收了标记Cy3荧光分子的目的 DNA序列。采用盐透析法体外组装了含有H2A.Z和H3.3的核小体结构,利用荧光标记、EB染色及考马斯亮蓝染色检测了含有组蛋白变体的核小体形成效率及形成过程的吉布斯自由能变化。结果发现,设计的3条DNA序列可以有效地组装形成含有组蛋白电梯的核小体结构,而且随着组蛋白八聚体与DNA比例的增加,核小体的形成效率显著提高;采用Cy3荧光标记可以灵敏且定量地计算组装过程的吉布斯自由能。该方法的建立对研究组蛋白变体相关的结构生物学及转录调控等具有一定的意义。     

非细胞体系核重建过程中两类膜泡在环形片层及核被膜形成中的作用

非洲爪蟾卵经钙离子载体A 23187激活后,在10,000g下离心得到爪蟾卵提取物。Lambda DNA加入上述提取物可构建出染色质结构,并在染色质表面重建核被膜,同时在染色质外的区域形成环形片层。核被膜与环形片层有相似的发生途径,它们都是由两类在形态、大小、膜结构上有明显差别的膜泡融合而来。首先是直径200nm的圆形小膜泡相互融合成双层膜片层,同时核孔复合体在双层膜上大量装配,以这些双层膜片层为基础,光滑的大膜泡与之融合导致环形片层的扩张与核被膜的成熟。     

技术与方法体外组装含有组蛋白变体H2A.Z及H3.3的核小体

核小体是构成真核生物染色质的基本结构单位,组蛋白变体H2A.Z及H3.3对染色质结构及基因转录过程发挥着重要的调控作用。体内研究核小体及染色质结构受到诸多因素限制,体外重构含有H2A.Z及H3.3的核小体结构是研究与组蛋白变体相关基因表达调控的重要方法之一。实验表达纯化了6种组蛋白,在复性的过程中装配了含有H2A.Z和H3.3的组蛋白八聚体。基于DNA序列10bp周期性及序列模体设计了3条易于形成核小体的DNA序列,通过PCR大量扩增的方法,回收了标记Cy3荧光分子的目的DNA序列。采用盐透析法体外组装了含有H2A.Z和H3.3的核小体结构,利用荧光标记、EB染色及考马斯亮蓝染色检测了含有组蛋白变体的核小体形成效率及形成过程的吉布斯自由能变化。结果发现,设计的3条DNA序列可以有效地组装形成含有组蛋白电梯的核小体结构,而且随着组蛋白八聚体与DNA比例的增加,核小体的形成效率显著提高;采用Cy3荧光标记可以灵敏且定量地计算组装过程的吉布斯自由能。该方法的建立对研究组蛋白变体相关的结构生物学及转录调控等具有一定的意义。     

非细胞体系核重建并非必需核小体与染色质的装配

以质粒DNA在爪蟾卵提取物S- 1 5 0中进行核小体构建时形成的超螺旋结构检测核小体的形成 ;利用阳离子交换剂CM -Cellulose定量结合组蛋白H2A和H2B ;并结合小球菌核酸酶分析核小体的形成 ,研究了爪蟾去膜精子在去除H2A ,H2B的S- 1 5 0中的核重建过程 .结果表明CM -Cellulose可有效去除组蛋白并阻止质粒DNA的核小体构建和精子染色质的改建 .但处理后的S- 1 5 0与膜泡组分仍可诱导去膜精子进行体外核重建 ,进一步表明非细胞体系核重建与外源DNA长度无关 ;核小体及染色质的组装对于核重建并非必需 .     

蛋白质自组装条件筛选形成的透明液滴中存在的自组装现象

微-纳尺度的蛋白质自组装体具有形貌多样性与良好的生物相容性,因而成为蛋白质自组装领域的研究热点。以蛋白质结晶条件的筛选手段高通量筛选不同类型蛋白质于不同尺度、不同形貌的自组装过程,是一种新兴的研究方法,具有重要研究意义。利用该方法进行蛋白质自组装条件筛选时,常会形成一些表观透明的液滴,其中是否有自组装现象的发生尚不明确。文中以β-乳球蛋白与蛋白质结晶试剂盒IndexTM C10相互作用为例进行探索,实验结果表明透明液滴中存在微-纳尺度的蛋白质自组装体。进一步通过扫描电镜观察不同初始浓度β-乳球蛋白与IndexTM C10混合形成的透明液滴中微-纳自组装体的形貌有所差别;通过激光共聚焦显微镜连续拍摄添加荧光标签的β-乳球蛋白形成自组装体的过程,可实时观察到液液相分离现象及最终形成的自组装体的形貌;通过原位X-射线衍射手段,可观察到自组装体内部结构随时间推移逐渐有序化的过程。以上研究表明,在以结晶条件筛选手段为基础的蛋白质自组装条件筛选实验中,透明液滴内的自组装现象具有深入探索的必要和价值。     

Lambda DNA在爪蟾卵非细胞系统中参与核组装的研究

以ＬａｍｂｄａＤＮＡ为外源性ＤＮＡ,爪蟾卵非细胞系统中进行核组装。在组装的不同时期提取核内和核外的ＤＮＡ,电泳检测显示其迁移率与ＬａｍｂｄａＤＮＡ完全相同,并随组装时间的延长,其含量在核内和核外分别是上升和下降的趋势。ＤＮａｓｅＩ能够降解核外的ＤＮＡ而不能降解核内的ＤＮＡ,证实了核膜的完整性。限制性内切酶分析进一步证明参加组装的ＤＮＡ就是ＬａｍｂｄａＤＮＡ。关键词     

PHYSICAL STUDIES OF ISOLATED EUCARYOTIC NUCLEI

The degree of chromatin condensation in isolated rat liver nuclei and chicken erythrocyte nuclei was studied by phase-contrast microscopy as a function of solvent pH, K⁺ and Mg⁺⁺ concentrations Data were represented as "phase" maps, and standard solvent conditions selected that reproducibly yield granular, slightly granular, and homogeneous nuclei Nuclei in these various states were examined by ultraviolet absorption and circular dichroism (CD) spectroscopy, low-angle X-ray diffraction, electron microscopy, and binding capacity for ethidium bromide Homogeneous nuclei exhibited absorption and CD spectra resembling those of isolated nucleohistone. Suspensions of granular nuclei showed marked turbidity and absorption flattening, and a characteristic blue-shift of a crossover wavelength in the CD spectra. In all solvent conditions studied, except pH < 2 3, low-angle X-ray reflections characteristic of the native, presumably superhelical, nucleohistone were observed from pellets of intact nuclei. Threads (100–200 A diameter) were present in the condensed and dispersed phases of nuclei fixed under the standard solvent conditions, and examined in the electron microscope after thin sectioning and staining Nuclei at neutral pH, with different degrees of chromatin condensation, exhibited similar binding capacities for ethidium bromide. These data suggest a model that views chromatin condensation as a close packing of superhelical nucleohistone threads but still permits condensed chromatin to respond rapidly to alterations in solvent environment.     

离体胆汁稳定外源性气核的作用

用显微放大及摄录像方法观察了高空减压条件下溶液中气泡的生成。研究了３０只豚鼠离体胆汁在体外稳定外源性气核的作用,发现离体胆汁具有与胆盐相同的稳定气核作用;胆汁溶液中的气核能悬浮稳定２天,胆汁的此种离体活性可保持８天。结果提示胆汁中的某些成分与目前减压气泡形成机制研究工作中正在寻找的稳定体内气核物质有重要关系。此工作对阐明减压病病因有重要意义。     

STUDIES ON NUCLEI USING CORRELATED CYTOCHEMICAL, LIGHT, AND ELECTRON MICROSCOPE TECHNIQUES

In this paper, a procedure for correlating electron microscope and light microscope cytochemical studies using immediately adjacent serial thin and thick sections has been described and discussed. This technique, combined with the Feulgen reaction for DNA, has been of particular value in framing and answering both general and specific questions about the nucleus. The results may be summarized as follows:— Apparent nuclear homogeneity in the electron microscope is not due to loss of DNA as evidenced by positive Feulgen reactions in such nuclei. Arrangement of Feulgen-positive material in chromosomes, heterochromatin, perinuclear and perinucleolar chromatin, etc., is similar to that customarily observed in the light microscope but this is not necessarily reflected in a cursory survey of the electron image. Careful comparison of light and electron images shows that fine differences in structure are associated with chromatin localization. Primary spermatocyte prophase chromosomes of crayfish have been positively identified by their Feulgen-positive nature. Core-like axial structures in such chromosomes have been observed (9) and are described further. A remarkable feature of spermiogenesis in the crayfish is an elaboration of the nuclear envelope of the spermatid accompanying the formation of what becomes a mass of convoluted membranes in the sperm. In the spermatid, perinuclear chromatin follows outpocketings of the nuclear envelope into the cytoplasm. In the early sperm, on the other hand, although the nuclear envelope is continuous with the system of convoluted membranes, the chromatin is distinct from it and is retained in the nucleus proper by some mechanism independent of the nuclear envelope. None of the above observations was apparent from the electron microscope images alone; they were possible only by virtue of the correlated cytochemical and electron microscope study of adjacent sections. The successful use of other cytochemical tests, such as the PAS reaction for certain carbohydrates, in such correlated studies is also described.     

Nuclear reconstitution in vitro: stages of assembly around protein-free DNA

We have developed a cell-free system derived from Xenopus eggs that reconstitutes nuclear structure around an added protein-free substrate (bacteriophage lambda DNA). Assembled nuclei are morphologically indistinguishable from normal eukaryotic nuclei: they are surrounded by a double membrane containing nuclear pores and are lined with a peripheral nuclear lamina. Nuclear assembly involves discrete intermediate steps, including nucleosome assembly, scaffold assembly, and nuclear membrane and lamina assembly, indicating that during reconstitution nuclear organization is assembled one level at a time. Topoisomerase II inhibitors block nuclear assembly. Lamin proteins and membrane vesicles bind to chromatin late in assembly, suggesting that these components do not interact with chromatin that is formed early in assembly. Reconstituted nuclei replicate their DNA; replication begins only after envelope formation has initiated, indicating that envelope attachment may be important for regulating replication.     

应用大肠杆菌染色素DNA在非洲爪蟾卵提取物实现诱导非细胞体系…

近年来我们实验室已成功地利用细胞核体外组装的实验模式,将多种生物的ＤＮＡ在非洲爪蟾卵提取物中实现了非细胞体系核装配。但亲缘关系最远的原核生物的染色体ＤＮＡ是否也能在此真核体系中进行核装配一直没有报道。我们以大肠杆菌染色体ＤＮＡ为材料,研究了它诱导的非细胞体系核装置。在光镜与电镜水平观察了核装配的过程。显微分光光度计扫描显示ＤＮＡ片段在核装配过程中经历了凝集－去凝集的变化。证明大肠杆菌染色体ＤＮＡ也