阿莫西林干预对婴儿优势菌在无菌小鼠体内定植的影响

目的考察阿莫西林干预对婴儿优势菌双歧杆菌及乳杆菌在无菌小鼠体内定植的影响。方法 1日龄Balb/c无菌乳鼠接种婴儿粪便悬液。饲养至7~21日龄灌胃阿莫西林(100mg/kg),对照组在同日龄给予等体积的生理盐水。利用qRT-PCR检测小鼠粪便中双歧杆菌、乳杆菌的含量。结果阿莫西林处理可显著降低乳杆菌(P0.05)、双歧杆菌(P0.05)在无菌小鼠体内定植数量,但停药后饲养至成年(53日龄)二者定植数量与对照组小鼠比较差异无统计学意义(P0.05)。结论哺乳期阿莫西林干预会导致乳杆菌、双歧杆菌在小鼠体内定植量下降,但停药后小鼠饲养至成年二者可达到正常定植量,婴儿菌群定植小鼠模型可以模拟与现有动物模型一致的阿莫西林对双歧杆菌、乳杆菌定植的影响规律。     

茶多酚对ApoE~(-/-)小鼠肠道菌群多样性的影响

目的以高脂饲料饲养的SPF级C57 BL/6 ApoE-/-小鼠作为动物模型,研究茶多酚采食对其肠道菌群多样性的影响。方法通过随机饮水的方式给予ApoE-/-小鼠0.4、0.8和1.6 g/L的茶多酚,处理14 d时用PCR-DGGE分析对照组(CK)和茶多酚组小鼠新鲜粪便中肠道菌群的相似性和多样性。结果 UPGMA聚类分析表明,低剂量茶多酚组(LTP)、中剂量茶多酚组(MTP)这两组与对照组(CK)、高剂量茶多酚组(HTP)聚为两大簇。PCA分析显示,LTP组与CK组、MTP组、HTP组分别聚集在不同位置,有明显界限;多样性数据分析显示:CK组DGGE图谱的丰富度和Shannon-Wiener指数(H')与茶多酚组差异无统计学意义(P0.05);CK组与MTP组的均匀度(E)差异存在统计学意义(P0.05,P=0.015),说明中剂量茶多酚作用14 d后与对照组肠道菌群的菌群分配相比均一性显著下降。结论连续处理14 d时CK组与LTP组、MTP组小鼠肠道菌群差异有统计学意义,即茶多酚对ApoE-/-小鼠肠道菌群多样性有显著影响。     

两品系小鼠食物过敏模型的比较

目的比较两种不同品系小鼠食物过敏模型的敏感性和肠道菌群变化的差异,旨在为食物过敏模型的建立提供依据。方法分别对30只4~5周龄BALB/c和KM雌鼠用卵清蛋白(ovalbumin,OVA)致敏建立食物过敏模型,ELISA法检测小鼠血清OVA特异性IgE水平;HE染色观察空肠组织形态;采用DGGE技术检测粪便菌群的变化。结果 (1)30只致敏的BALB/c小鼠中有27只血清OVA特异性IgE水平明显升高(P0.001),而30只致敏的KM小鼠中有21只,且BALB/c小鼠空肠绒毛炎症细胞浸润、上皮脱落及坏死比KM小鼠明显;(2)食物过敏造模后,BALB/c小鼠肠道菌群的改变明显(P0.001),而KM小鼠中仅有均匀度改变显著(P0.05);(3)BALB/c小鼠和KM小鼠对照组肠道菌群的丰富度、Shannon指数及均匀度都有差异。结论 BALB/c小鼠对OVA的敏感性高于KM小鼠,不同品系小鼠肠道菌群结构不同,OVA处理后,BALB/c小鼠菌群的改变比KM小鼠更明显。     

益生菌干预对高脂高糖饮食诱导肥胖小鼠肠道菌群及脂代谢影响的研究

目的探讨益生菌干预对高脂高糖饮食诱导肥胖小鼠肠道菌群及脂代谢的影响。方法 C57BL/6J雌性小鼠30只随机分为正常对照组、肥胖组和益生菌干预组,每组10只,分别给予标准饲料、高脂高糖饲料以及高脂高糖饲料同时给予益生菌干预,连续喂养6周,测量并分析三组小鼠的体重。留取小鼠粪便样本,应用PCR-DGGE法分析菌群,应用酶反应比色法分析三组小鼠血脂情况。结果与正常对照组小鼠相比,肥胖小鼠体重明显增加,益生菌干预组小鼠体重略有增加;肥胖组小鼠肠道菌群紊乱,与正常对照组分别聚为两大类,益生菌干预组小鼠肠道菌群与正常对照组聚为一大类。肥胖小鼠血清总胆固醇、低密度脂蛋白含量升高,益生菌干预组小鼠较肥胖组血清总胆固醇、低密度脂蛋白含量降低,但与正常对照组仍有差异。结论高脂高糖饮食诱导肥胖小鼠存在肠道菌群结构失调及脂代谢异常,益生菌干预可以改善肥胖小鼠菌群失调以及脂代谢紊乱。     

不同途径下MIMP对 炎症性肠病小鼠肠道菌群结构的影响

目的通过葡聚糖硫酸钠诱导小鼠炎症性肠病(IBD)模型并观察不同途经下乳杆菌微小膜蛋白(MIMP)对炎症性肠病小鼠的紧密连接蛋白及菌群结构的影响。方法 C57BL/6小鼠24只根据DSS和MIMP不同干预组合将其分为4组:MIMP腹腔注射组(n=6)、MIMP灌胃组(n=6)、诱导肠炎组(n=6)和健康对照组(n=6),利用Western blot对各组小鼠肠道中紧密连接蛋白(Occludin、JAM-1和ZO-1)的表达进行检测,采用16SrRNA测序技术检测V4区鉴定细菌,并进行菌群差异分析。结果 MIMP腹腔注射及灌胃均可显著提高IBD小鼠肠道中紧密连接蛋白的表达水平,灌胃组效果更为显著;MIMP干预后小鼠肠道中拟杆菌门(Bacteroidetes)丰度增高、厚壁菌门(Firmicutes)及变形菌门(Proteobacteria)丰度降低,LEfSe分析、PCoA分析和PCA分析提示4组小鼠肠道菌群结构差异显著。结论不同途径下MIMP均可显著提高IBD小鼠肠道中紧密连接蛋白的表达水平,改善肠黏膜屏障功能,纠正小鼠肠道菌群结构紊乱。     

纯母乳喂养功能性便秘婴儿的肠道菌群与母乳菌群CSCD

目的利用高通量测序分析纯母乳喂养的功能性便秘(functional constipation,FC)婴儿的肠道菌群和母乳菌群特点,探讨两类菌群与该类婴儿FC发生发展的相关性。方法以6月龄以下纯母乳喂养的婴儿为研究对象,收集19例FC婴儿(病例组)与6例健康婴儿(对照组)的粪便样本及母乳样本,提取菌群的基因组DNA,扩增16S rRNA基因的V3-V4片段,通过Illumina MiSeq平台进行测序,并对测序结果进行生物信息学分析。结果6月龄以下纯母乳喂养的FC婴儿中,病例组肠道菌群的物种丰富度较对照组显著增加(t=2.279,P<0.05),母乳菌群的分布均匀度较对照组显著降低(t=2.874,P<0.05)。肠道菌群在属水平上,病例组放线菌属的丰度显著高于对照组(Z=2.673,P<0.05),而葡萄球菌属(Z=2.617,P<0.05)、罗斯菌属(Z=2.155,P<0.05)及梭菌属(Z=2.011,P<0.05)的丰度均显著低于对照组。母乳菌群在门水平上,病例组变形菌门的丰度显著低于对照组(Z=2.800,P<0.01),在属水平上,病例组的罗尔斯通菌属(Z=2.354,P<0.05)、罗伊杆菌属(Z=2.484,P<0.05)、不动杆菌属(Z=3.055,P<0.05)及伯克霍尔德菌属(Z=2.611,P<0.05)的丰度均显著低于对照组。随访病例组婴儿,大部分(13例/19例)患儿在6月龄~8月龄时排便频次增加至1~2次/d,且其身高体质量均位于中位数正负两个标准差之间。结论6月龄以下纯母乳喂养FC婴儿的肠道菌群及母乳菌群的物种多样性、组成及丰度与健康对照人群相比均存在显著差异。大部分纯母乳喂养的FC婴儿的便秘症状可自行缓解,临床应避免过度检查及干预。     

长链菊粉对抗生素处理后小鼠肠道菌群重建的影响

【目的】评价长链菊粉对抗生素致小鼠肠道菌群失调后肠道菌群的恢复情况。【方法】选择50只健康的10周龄BALB/c小鼠,随机分为2组,其中15只为正常对照组,余下35只饮用水中含4种抗生素连续喂养7 d,诱导小鼠肠道菌群严重失调后,再随机分为长链菊粉恢复组(饮用水中添加5%(W/W)长链菊粉)和自发恢复组(饮用水为无菌水),连续处理21 d。受试小鼠在抗生素治疗后的第7天以及恢复喂养的第7、14和21天,取结肠组织进行切片然后进行HE染色分析,无菌取粪便进行16Sr RNA测序分析,观察小鼠肠道组织及菌群恢复情况。【结果】抗生素处理7 d后,小鼠结肠组织有轻微炎症,但肠道菌群严重失调。组织学分析表明,在补充长链菊粉或自发恢复21d后,结肠炎症逐渐减轻;但相比于自发恢复,长链菊粉干预延迟了结肠组织的恢复。16S r RNA基因V3–V4区扩增子测序分析显示无论是长链菊粉补充还是自发恢复都无法在属水平上恢复肠道菌群组成。尤其是长链菊粉的补充,反而导致了某些机会致病菌的选择性扩增,并提高了与肠道菌群相关的疾病途径。【结论】抗生素诱导肠道菌群严重失调后补充长链菊粉会延迟肠道菌群的重建,可能会导致潜在的不良影响。     

甘草泻心汤对抗生素诱导肠道菌群失调小鼠 肠道主要菌群及sIgA的影响

摘要：目的 探索甘草泻心汤对抗生素诱导肠道菌群失调小鼠肠道主要菌群及sIgA的影响。方法 将40只实验小鼠随机分为4组：正常对照组、模型对照组、甘草泻心汤组和思连康组,每组10只,给予除正常对照组以外的其他组小鼠盐酸林可霉素7 d进行造模。造模成功后,甘草泻心汤组小鼠给予10.16 g/kg体重的甘草泻心汤浓缩液灌胃,思连康组小鼠给0.68 g/kg思连康灌胃。正常对照组及模型对照组小鼠给予10 mL/kg的生理盐水代替,14 d后收集小鼠新鲜粪便采用平皿计数法进行肠道菌群检测,并采用免疫组化法检测肠道sIgA的表达情况。结果 甘草泻心汤以及思连康均能降低肠道菌群失调小鼠肠道内大肠埃希菌、肠球菌的数量,增加双歧杆菌、乳杆菌的数量,促进肠道内sIgA的表达,甘草泻心汤疗效优于思连康（P＜0.001）。结论 甘草泻心汤及思连康均能够纠正小鼠肠道菌群失调状态,甘草泻心汤疗效优于思连康,其调节机制可能是通过促进肠道内sIgA的表达来实现的。     

大黄酸对糖尿病小鼠肠道菌群影响的初步研究

目的研究大黄酸对2型糖尿病模型(db/db小鼠)和正常对照模型(db/m小鼠)肠道菌群丰度、种类的影响。方法将db/db小鼠和db/m小鼠分为随机分为实验组、对照组,在标准饮食的基础上分别给予大黄酸溶液(120mg/kg)和纤维素钠溶液(1%)灌胃,分别于实验0、2、3周无菌收集小鼠粪便,进行V3-V5、V5-V6高可变区16SrDNA基因组测序,分析四组小鼠肠道菌群组成结构和菌落多样性的变化,并比较各组间差异。结果大黄酸治疗后两组小鼠拟杆菌明显增多,硬壁菌明显减少,两组小鼠肠道菌群多样性指数(Shannon-Wiener指数)治疗后均降低。db/db组小鼠血糖较对照组降低(t=3.499,P=0.013)。结论大黄酸可以增加db/db小鼠和db/m小鼠肠道中拟杆菌数量,减少硬壁菌数量,同时db/db小鼠和db/m小鼠肠道菌群多样性在大黄酸治疗后都降低。     

流感病毒感染对小鼠肠道菌群的影响及桑叶的调节作用

【摘 要】 目的 探讨流感病毒对肠道菌群的影响以及桑叶提取物在治疗小鼠流感时对肠道菌群的调节作用。方法 将36只小鼠随机分为4组,正常对照组滴鼻生理盐水,其余以流感病毒鼠肺适应株FM1滴鼻3 d,建立流感小鼠模型后,正常对照组和病毒对照组灌胃生理盐水,另2组分别以高剂量(500 mg/kg)和低剂量(100 mg/kg)灌胃桑叶提取物,连续5 d。每天检测小鼠体重,并于病毒感染前、感染后及灌胃处理后3次无菌收集小鼠粪便,培养并计数小鼠粪便中肠杆菌、肠球菌、乳酸杆菌和双歧杆菌。结果 小鼠在感染病毒后体重明显降低,桑叶提取物治疗后体重降低的趋势有所减缓。小鼠肠道菌群在感染流感后有明显的变化,但桑叶提取物治疗后肠道菌群的恢复不明显。结论 流感病毒感染能引起小鼠肠道菌群的失调,桑叶不显示调节肠道菌群的效果,表明其对流感的治疗不通过调节肠道菌群平衡来发挥作用。     

Effects of Age and Strain on the Microbiota Colonization in an Infant Human Flora-Associated Mouse Model

The establishment of human flora-associated animal models allows the in vivo manipulation of host, microbial, and environmental parameters to influence the gut microbial community. However, it is difficult to simulate infant gut microbiota in germ-free animals because of the variation and dynamic state of infant microbial communities. In this study, the effects of age and strain on intestinal microbiota were observed in an infant human flora-associated (IHFA) mouse model. To establish an IHFA model, postnatal day (PND) 1 germ-free mice (Kunming, n = 10; BALB/c, n = 10) were infected with feces from a breast-fed infant. Microbiota in the feces of BALB/c mice (at PND 7, 14, and 21), and Kunming mice (at PND 14) were analyzed by PCR-denaturing gradient gel electrophoresis. Bifidobacteria and lactobacilli levels in the feces of BALB/c and Kunming mice (PND 7/14/21) were detected by quantitative real-time PCR. The Dice similarity coefficient (Cs) for the fecal microbiota of IHFA mice in comparison with the HD donor sample was higher for BALB/c mice than for Kunming mice (P < 0.05). In addition, the DCs at PND 7 were lower than those at PND 14 and PND 21 in both mouse strains (P < 0.05). The Bifidobacteria and Lactobacillus species colonizing the BALB/c mice were similar to those in the Kunming mice (at PND 7/14/21). The bifidobacteria counts increased with age in both mouse strains, whereas the lactobacilli counts decreased with age in both strains. These results suggest that both age and strain influence microbiota patterns in the IHFA mouse model.     

The Development and Stability of the Genus <Emphasis Type="Italic">Bacteriodes</Emphasis> from Human Gut Microbiota in HFA Mice Model

Human flora-associated (HFA) mice are frequently applied in studying the ecology and metabolism of human gut microbiota. However, the development and stability of the genus Bacteriodes, a prominent bacteria group of human gut microbiota, in HFA mice have not yet fully been examined. In this study, PCR-denaturing gradient gel electrophoresis (DGGE) analysis was employed to monitor the Bacteriodes community in the fecal microbiota of six HFA Kunming mice during a period of 3 weeks. Based on the DGGE banding patterns, the majority of prominent bands in the HFA mice DGGE profile were also typical bands in the human DGGE profile, despite the absence of three bands (corresponding to two different B. thetaiotaomicron strains and one B. intestinalis strain) from the human DGGE profile. The Dice coefficient of similarity for the fecal microbiota of HFA mice in comparison to the human donor sample ranged between 74 ± 6% and 81 ± 7%. The phylogeny of bands in the DGGE profile showed that the dominant Bacteriodes species in the fecal microbiota of HFA mice were B. thetaiotaomicron, representing 66.7% of all bands. Our results indicate that the genus Bacteriodes in the fecal microbiota of HFA mice was selected from the human donor and could remain relatively stable over time.     

高脂饮食中添加短链菊粉对小鼠肠道菌群的影响

目的:探究高脂饮食中添加短链菊粉对小鼠肠道菌群的影响。方法:选择8周龄雄性小鼠,5只喂食高脂饲料,5只喂食10%菊粉复合型高脂饲料,喂食8周后收集小鼠粪便,检测小鼠粪便中三种主要的短链脂肪酸。同时,提取小鼠粪便中的细菌基因组,对菌群基因组16S rRNA基因V4高变区进行测序,对数据进行PCoA分析、Alpha多样性分析、LEfSe分析和16S功能预测。结果:菊粉添加后,小鼠粪便中含有的细菌DNA量增多,短链脂肪酸增加。菊粉组和对照组PCoA图可以看到明显聚类。菊粉组物种多样性低于对照组。菊粉组小鼠粪便中S24_7菌科丰度上升;Lachnospiraceae(毛螺菌科),Ruminococcaceae(瘤胃菌科)和Deferribacteraceae(脱铁杆菌科)丰度下降。16S基因功能预测发现22个第二层级的KEGG通路发生变化。结论:高脂饮食情况下短链菊粉的添加会改变小鼠肠道菌群,继而影响肠道菌群的功能。     

肥胖患者HFA小鼠模型的建立

目的研究肥胖患者的肠道菌群在无菌小鼠体内的定植规律。方法选取20只无菌KM小鼠,接种肥胖患者的粪便,构建菌群人源化(HFA)动物模型,利用变性梯度凝胶电泳技术(DGGE)评价患者肠道菌群在无菌小鼠体内的定植规律。结果 HFA小鼠菌群平均丰富度(richness,S)为12.04±3.68,肥胖患者的条带S为24,为HFA小鼠S的2倍;肥胖患者Shannon指数(H')为3.02,HFA小鼠平均H'为2.46±0.33;HFA小鼠与人肠道菌群的总相似度为26%;大部分雌性HFA小鼠与雄性HFA小鼠在聚类分析图上分离,且雄性HFA小鼠与患者更为相似。结论HFA小鼠体内能部分模拟肥胖患者的微生物区系,且与患者性别相同的小鼠模拟得更好。本实验建立的HFA模型为肥胖与肠道菌群关系的进一步研究提供新的选择。     

Impact of Neonatal Antibiotic Treatment on the Biodiversity of the Murine Intestinal Lactobacillus Community

In this study, we investigated the impact of neonatal amoxicillin treatment on the development of the murine intestinal Lactobacillus community. Suckling BALB/c mice received a daily intragastric gavage of amoxicillin or saline from postnatal day 7 (PND 7) to PND 20. Just after the treatment (PND 21) and 5 weeks later (PND 56), the colon digesta samples were analyzed by Lactobacillus-specific quantitative real-time PCR analysis and PCR-denaturing gradient gel electrophoresis (DGGE) technique. Real-time PCR results showed that the levels of lactobacilli in the treatment group were similar to those in the control at PND 56. However, in DGGE analysis the number of DGGE bands and Shannon index were decreased significantly in comparison with control (P < 0.05). The dominant Lactobacillus strain in the murine colon changed from L. johnsonii to L. murinus. These results demonstrated that neonatal amoxicillin treatment led to a significant impact on the biodiversity of the murine intestinal Lactobacillus community within a long-time period.     

东北地区分泌型和非分泌型母亲哺乳期 HMO差异及其对子代肠道菌群的影响

目的分析中国东北地区母亲分泌型和非分泌型基因的分布及其在哺乳期母乳中低聚糖(HMO)种类和含量的差异,探讨这些差异对于子代肠道微生态的影响。方法收集56例母亲在哺乳期第6天母乳样本及其母乳喂养的新生儿在同一天的粪便样本;以质谱分析20种主要HMO的含量;以变性梯度凝胶电泳检测两组新生儿肠道菌群差异。结果所选取的56例母亲其分泌型与非分泌型的比例为43∶13,其中分泌型母亲的岩藻糖基化HMO含量显著高于非分泌型母亲,并且两组新生儿肠道菌群结构也有明显差异。结论不同基因型母亲在哺乳期HMO存在明显差异,而这一差异显著影响了其子代肠道菌群结构。     

Microbiome in Intestinal Lavage Fluid May Be A Better Indicator in Evaluating The Risk of Developing Colorectal Cancer Compared with Fecal Samples

OBJECTIVE: Intestinal microbiota plays a vital role in the pathogenesis of colorectal cancer (CRC), which is crucial for assessing the risk and prognosis of CRC. Most studies regarding human gut microbiota mainly based on the feces, but the exact composition of microbiota vary significantly due to fecal composition is easily affected by many factors. We aim to evaluate whether intestinal lavage fluid (IVF) is a better substitution mirroring the gut microbiota. METHODS: We performed 16S rRNA gene analysis on fecal and IVF samples from 30 CRC patients and 25 healthy individuals, comparison in luminal (feces) / mucosal (IVF) adherent bacterial community profiles were analyzed. RESULTS: The difference between feces and IVF were observed, including the diversity and abundance of pathogenic bacteria (either in single strain or in co-occurrence pattern). IVF group shared 605 OTUs with the fecal group, but there was 94 OTUs only observed in fecal samples, while 247 OTUs were mainly existing in the IVF group. Among them, 27 vital bacterial species detected in IVF, while 10 critical species detected in fecal samples. The co-occurrence bacteria Fusobacteria Cluster and Proteobacteria Cluster 2 significantly increased in IVF than in control (P < .01), while Firmicutes Cluster 1, Firmicutes Cluster 2 and Proteobacteria Cluster 1 were markedly lower in IVF than in control (P < .001). In CRC feces, Fusobacteria Cluster was higher than in control (P < .05), but Firmicutes Cluster 1 was of substantially less abundance than in control (P < .001). Proteobacteria Cluster 2 was increased dramatically in IVF than in feces (P < .05), Firmicutes Cluster 1 were of substantially less abundance than in feces (P < .05). CONCLUSION: Pathogenic microbiota is more abundant in IVF than in feces. Microbiota of IVF may closely be related to the mucosal-associated microbial communities, which benefit from elucidating the relationship of the intestinal microbiota and CRC carcinogenesis.     

Role of intestinal microbiota in transformation of bismuth and other metals and metalloids into volatile methyl and hydride derivatives in humans and mice

The present study shows that feces samples of 14 human volunteers and isolated gut segments of mice (small intestine, cecum, and large intestine) are able to transform metals and metalloids into volatile derivatives ex situ during anaerobic incubation at 37 degrees C and neutral pH. Human feces and the gut of mice exhibit highly productive mechanisms for the formation of the toxic volatile derivative trimethylbismuth [(CH(3))(3)Bi] at rather low concentrations of bismuth (0.2 to 1 mumol kg(-1) [dry weight]). An increase of bismuth up to 2 to 14 mmol kg(-1) (dry weight) upon a single (human volunteers) or continuous (mouse study) administration of colloidal bismuth subcitrate resulted in an average increase of the derivatization rate from approximately 4 pmol h(-1) kg(-1) (dry weight) to 2,100 pmol h(-1) kg(-1) (dry weight) in human feces samples and from approximately 5 pmol h(-1) kg(-1) (dry weight) to 120 pmol h(-1) kg(-1) (dry weight) in mouse gut samples, respectively. The upshift of the bismuth content also led to an increase of derivatives of other elements (such as arsenic, antimony, and lead in human feces or tellurium and lead in the murine large intestine). The assumption that the gut microbiota plays a dominant role for these transformation processes, as indicated by the production of volatile derivatives of various elements in feces samples, is supported by the observation that the gut segments of germfree mice are unable to transform administered bismuth to (CH(3))(3)Bi.