The relationship between the spectral diversity of satellite imagery,habitat heterogeneity,and plant species richness

Assessment of habitat heterogeneity and plant species richness at the landscape scale is often based on intensive and extensive fieldwork at great cost of time and money. We evaluated the use of satellite imagery as a quantitative measure of the relationship between the spectral diversity of satellite imagery, habitat heterogeneity, and plant species richness. A 16 km² portion of a military training area in Germany was systematically sampled by plant taxonomic experts on a grid of one hundred 1-ha plots. The diversity of disturbance types, resulting habitat heterogeneity, and plant species richness were determined for each plot. Using an IKONOS multispectral satellite image, we examined 168 metrics of spectral diversity as potential indicators of those independent variables. Across all potential relationships, a simple count of values per spectral band per plot, after compressing the data from the original 11-bit format with 2048 potential values per band into a maximum of 100 values per band, resulted in the most consistent predictor for various metrics of habitat heterogeneity and plant species richness. The count of values in the green band generally out-performed the other bands. The relationship between spectral diversity and plant species richness was stronger than for measures of habitat heterogeneity. Based on the results, we conclude that remotely sensed assessment of spectral diversity, when coupled with limited ground-truthing, can provide reasonable estimates of habitat heterogeneity and plant species richness across broad areas.     

Combining geostatistical models and remotely sensed data to improve tropical tree richness mapping

Information on the spatial distribution and composition of biological communities is essential in designing effective strategies for biodiversity conservation and management. Reliable maps of species richness across the landscape can be useful tools for these purposes. Acquiring such information through traditional survey techniques is costly and logistically difficult. The kriging interpolation method has been widely used as an alternative to predict spatial distributions of species richness, as long as the data are spatially dependent. However, even when this requirement is met, researchers often have few sampled sites in relation to the area to be mapped. Remote sensing provides an inexpensive means to derive complete spatial coverage for large areas and can be extremely useful for estimating biodiversity. The aim of this study was to combine remotely sensed data with kriging estimates (hybrid procedures) to evaluate the possibility of improving the accuracy of tree species richness maps. We did this through the comparison of the predictive performance of three hybrid geostatistical procedures, based on tree species density recorded in 141 sampling quadrats: co-kriging (COK), kriging with external drift (KED), and regression kriging (RK). Reflectance values of spectral bands, computed NDVI and texture measurements of Landsat 7 TM imagery were used as ancillary variables in all methods. The R² values of the models increased from 0.35 for ordinary kriging to 0.41 for COK, and from 0.39 for simple regression estimates to 0.52 and 0.53 when using simple KED and RK, respectively. The R² values of the models also increased from 0.60 for multiple regression estimates to 0.62 and 0.66 when using multiple KED and RK, respectively. Overall, our results demonstrate that these procedures are capable of greatly improving estimation accuracy, with multivariate RK being clearly superior, because it produces the most accurate predictions, and because of its flexibility in modeling multivariate relationships between tree richness and remotely sensed data. We conclude that this is a valuable tool for guiding future efforts aimed at conservation and management of highly diverse tropical forests.     

Hyperspectral Remote Sensing of Canopy Biodiversity in Hawaiian Lowland Rainforests

Mapping biological diversity is a high priority for conservation research, management and policy development, but few studies have provided diversity data at high spatial resolution from remote sensing. We used airborne imaging spectroscopy to map woody vascular plant species richness in lowland tropical forest ecosystems in Hawai’i. Hyperspectral signatures spanning the 400–2,500 nm wavelength range acquired by the NASA Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) were analyzed at 17 forest sites with species richness values ranging from 1 to 17 species per 0.1–0.3 ha. Spatial variation (range) in the shape of the AVIRIS spectra (derivative reflectance) in wavelength regions associated with upper-canopy pigments, water, and nitrogen content were well correlated with species richness across field sites. An analysis of leaf chlorophyll, water, and nitrogen content within and across species suggested that increasing spectral diversity was linked to increasing species richness by way of increasing biochemical diversity. A linear regression analysis showed that species richness was predicted by a combination of four biochemically-distinct wavelength observations centered at 530, 720, 1,201, and 1,523 nm (r ² = 0.85, p < 0.01). This relationship was used to map species richness at approximately 0.1 ha resolution in lowland forest reserves throughout the study region. Future remote sensing studies of biodiversity will benefit from explicitly connecting chemical and physical properties of the organisms to remotely sensed data.     

Correlating species and spectral diversities using hyperspectral remote sensing in early‐successional fields

Advances in remote sensing technology can help estimate biodiversity at large spatial extents. To assess whether we could use hyperspectral visible near‐infrared (VNIR) spectra to estimate species diversity, we examined the correlations between species diversity and spectral diversity in early‐successional abandoned agricultural fields in the Ridge and Valley ecoregion of north‐central Virginia at the Blandy Experimental Farm. We established plant community plots and collected vegetation surveys and ground‐level hyperspectral data from 350 to 1,025 nm wavelengths. We related spectral diversity (standard deviations across spectra) with species diversity (Shannon–Weiner index) and evaluated whether these correlations differed among spectral regions throughout the visible and near‐infrared wavelength regions, and across different spectral transformation techniques. We found positive correlations in the visible regions using band depth data, positive correlations in the near‐infrared region using first derivatives of spectra, and weak to no correlations in the red‐edge region using either of the two spectral transformation techniques. To investigate the role of pigment variability in these correlations, we estimated chlorophyll, carotenoid, and anthocyanin concentrations of five dominant species in the plots using spectral vegetation indices. Although interspecific variability in pigment levels exceeded intraspecific variability, chlorophyll was more varied within species than carotenoids and anthocyanins, contributing to the lack of correlation between species diversity and spectral diversity in the red‐edge region. Interspecific differences in pigment levels, however, made it possible to differentiate these species remotely, contributing to the species‐spectral diversity correlations. VNIR spectra can be used to estimate species diversity, but the relationships depend on the spectral region examined and the spectral transformation technique used.     

Remotely sensed spectral heterogeneity as a proxy of species diversity: Recent advances and open challenges

Environmental heterogeneity is considered to be one of the main factors associated with biodiversity given that areas with highly heterogeneous environments can host more species due to their higher number of available niches. In this view, spatial variability extracted from remotely sensed images has been used as a proxy of species diversity, as these data provide an inexpensive means of deriving environmental information for large areas in a consistent and regular manner. The aim of this review is to provide an overview of the state of the art in the use of spectral heterogeneity for estimating species diversity. We will examine a number of issues related to this theme, dealing with: i) the main sensors used for biodiversity monitoring, ii) scale matching problems between remotely sensed and field diversity data, iii) spectral heterogeneity measurement techniques, iv) types of species taxonomic diversity measures and how they influence the relationship between spectral and species diversity, v) spectral versus genetic diversity, and vi) modeling procedures for relating spectral and species diversity. Our review suggests that remotely sensed spectral heterogeneity information provides a crucial baseline for rapid estimation or prediction of biodiversity attributes and hotspots in space and time.     

Utility of multispectral imaging for nuclear classification of routine clinical histopathology imagery

Background

We present an analysis of the utility of multispectral versus standard RGB imagery for routine H&;E stained histopathology images, in particular for pixel-level classification of nuclei. Our multispectral imagery has 29 spectral bands, spaced 10 nm within the visual range of 420–700 nm. It has been hypothesized that the additional spectral bands contain further information useful for classification as compared to the 3 standard bands of RGB imagery. We present analyses of our data designed to test this hypothesis.

Results

For classification using all available image bands, we find the best performance (equal tradeoff between detection rate and false alarm rate) is obtained from either the multispectral or our "ccd" RGB imagery, with an overall increase in performance of 0.79% compared to the next best performing image type. For classification using single image bands, the single best multispectral band (in the red portion of the spectrum) gave a performance increase of 0.57%, compared to performance of the single best RGB band (red). Additionally, red bands had the highest coefficients/preference in our classifiers. Principal components analysis of the multispectral imagery indicates only two significant image bands, which is not surprising given the presence of two stains.

Conclusion

Our results indicate that multispectral imagery for routine H&;E stained histopathology provides minimal additional spectral information for a pixel-level nuclear classification task than would standard RGB imagery.

     

Tree biodiversity in protected and logged Bornean tropical rain forests and its measurement by satellite remote sensing

Aim Conservation activities have increasingly focused on issues at the level of the landscape but are constrained by limited data and knowledge relating to biodiversity at this scale. Satellite remote sensing has considerable, but under‐exploited, potential as a source of information on biodiversity at the landscape level. Remote sensing has generally been used to assess biodiversity indirectly, using approaches that often fail to fully exploit the information content of the imagery and typically only with regard to the species richness component of biodiversity. The aim of this paper was to assess the potential of remote sensing as a source of information on the richness, evenness and composition of tree species in a tropical rain forest. Location The test site was a c. 225 km² region centred on the Danum Valley Field Centre, Borneo. This test site contained regions of undisturbed and differentially logged rain forest. Methods Data on tree biodiversity had been acquired for fifty‐two sample plots by standard field survey methods and were used to derive summary indices of biodiversity for seedlings, saplings and mature trees. Differences between logged and unlogged sites were evaluated by comparison of the indices and species accumulation curves. A Landsat Thematic Mapper (TM) image of the site acquired close to the date of the field survey was obtained and rigorously pre‐processed. Feedforward neural networks were used to derive predictions of biodiversity indices from the imagery. A Kohonen self organizing map neural network was used to ordinate the field data to derive classes of forest defined by relative similarity in species composition. The separability of the defined classes in the Landsat TM image was evaluated with a discriminant analysis. Results Analyses of the field data revealed considerable variation in the biodiversity of seedlings, saplings and trees at the site, associated, in part, with differences in logging activities. This variation in biodiversity was manifest in the remotely sensed data. The analyses indicated an ability to (1) predict biodiversity indices, with the highest correlation between predicted and actual index observed for evenness described by Shannon entropy (r = 0.546), but especially to (2) classify nine forest classes defined on the basis of similarity in tree species composition (accuracy 95.8%). Main conclusions Logging activities impacted on biodiversity and the resulting variation in biodiversity was reflected in the remotely sensed imagery. Using methods that exploit more fully the information content of the imagery than those used in other previous studies, a richer representation of biodiversity may be derived. This representation includes estimates of key summary indices of biodiversity, notably richness and evenness, as well as information on species composition. The results indicate that remotely sensed data may be used as a source of information on biodiversity at the landscape scale that may be used to inform conservation science and management.     

Picturing local adaptation: Spectral and structural traits from drone remote sensing reveal clinal responses to climate transfer in common-garden trials of interior spruce (Picea engelmannii × glauca)

Common-garden trials of forest trees provide phenotype data used to assess growth and local adaptation; this information is foundational to tree breeding programs, genecology, and gene conservation. As jurisdictions consider assisted migration strategies to match populations to suitable climates, in situ progeny and provenance trials provide experimental evidence of adaptive responses to climate change. We used drone technology, multispectral imaging, and digital aerial photogrammetry to quantify spectral traits related to stress, photosynthesis, and carotenoids, and structural traits describing crown height, size, and complexity at six climatically disparate common-garden trials of interior spruce (Picea engelmannii × glauca) in western Canada. Through principal component analysis, we identified key components of climate related to temperature, moisture, and elevational gradients. Phenotypic clines in remotely sensed traits were analyzed as trait correlations with provenance climate transfer distances along principal components (PCs). We used traits showing clinal variation to model best linear unbiased predictions for tree height (R² = .98–.99, root mean square error [RMSE] = 0.06–0.10 m) and diameter at breast height (DBH, R² = .71–.97, RMSE = 2.57–3.80 mm) and generated multivariate climate transfer functions with the model predictions. Significant (p < .05) clines were present for spectral traits at all sites along all PCs. Spectral traits showed stronger clinal variation than structural traits along temperature and elevational gradients and along moisture gradients at wet, coastal sites, but not at dry, interior sites. Spectral traits may capture patterns of local adaptation to temperature and montane growing seasons which are distinct from moisture-limited patterns in stem growth. This work demonstrates that multispectral indices improve the assessment of local adaptation and that spectral and structural traits from drone remote sensing produce reliable proxies for ground-measured height and DBH. This phenotyping framework contributes to the analysis of common-garden trials towards a mechanistic understanding of local adaptation to climate.     

泥炭藓群落的光谱特征及遥感识别研究

以中位泥炭藓（Sphagnum magellanicum Brid.）为研究对象,分别从实测冠层光谱和遥感传感器模拟光谱层面分析其群落的光谱特征。研究结果显示,中位泥炭藓与北方针叶林光谱差异明显,最佳光谱识别区间为740~1140 nm和1230~1412 nm。在可见光波段上,中位泥炭藓与云杉（Picea engelmannii Parry ex Engelmann）和黑松（Pinus contorta Douglas ex Loudon）的绿峰位置有所差异。水竹（Phyllostachys heteroclada Oliver）和中位泥炭藓的光谱识别特征波段集中在可见光-近红外波段,分别为400~550、560~696、1025~1143 nm。中位泥炭藓与北方针叶林以及水竹的特征光谱区间存在细微差异,且与水竹在可见光波段有较好的可分性,因此不同纬度带上中位泥炭藓群落的特征谱宽有所差异。红外波段是中位泥炭藓识别的最佳光谱区间。在多光谱遥感水平上,中位泥炭藓识别效果较好,传感器的识别能力依次为：MSI > ALI > OLI > ASTER。在2个中位泥炭藓群落的光谱特征分析中,导数、对数、包络线去除法的光谱降维能力有所差异,其中包络线去除法效果最好。     

泥炭藓群落的光谱特征及遥感识别研究

以中位泥炭藓(Sphagnum magellanicum Brid.)为研究对象,分别从实测冠层光谱和遥感传感器模拟光谱层面分析其群落的光谱特征。研究结果显示,中位泥炭藓与北方针叶林光谱差异明显,最佳光谱识别区间为740～1140 nm和1230～1412 nm。在可见光波段上,中位泥炭藓与云杉(Picea engelmannii Parry ex Engelmann)和黑松(Pinus contorta Douglas ex Loudon)的绿峰位置有所差异。水竹(Phyllostachys heteroclada Oliver)和中位泥炭藓的光谱识别特征波段集中在可见光-近红外波段,分别为400～550、560～696、1025～1143 nm。中位泥炭藓与北方针叶林以及水竹的特征光谱区间存在细微差异,且与水竹在可见光波段有较好的可分性,因此不同纬度带上中位泥炭藓群落的特征谱宽有所差异。红外波段是中位泥炭藓识别的最佳光谱区间。在多光谱遥感水平上,中位泥炭藓识别效果较好,传感器的识别能力依次为:MSI> ALI> OLI> ASTER。在2个中位泥炭藓群落的光谱特征分析中,导数、对数、包络线去除法的光谱降维能力有所差异,其中包络线去除法效果最好。     

MODISTools – downloading and processing MODIS remotely sensed data in R

Remotely sensed data – available at medium to high resolution across global spatial and temporal scales – are a valuable resource for ecologists. In particular, products from NASA's MODerate‐resolution Imaging Spectroradiometer (MODIS), providing twice‐daily global coverage, have been widely used for ecological applications. We present MODISTools, an R package designed to improve the accessing, downloading, and processing of remotely sensed MODIS data. MODISTools automates the process of data downloading and processing from any number of locations, time periods, and MODIS products. This automation reduces the risk of human error, and the researcher effort required compared to manual per‐location downloads. The package will be particularly useful for ecological studies that include multiple sites, such as meta‐analyses, observation networks, and globally distributed experiments. We give examples of the simple, reproducible workflow that MODISTools provides and of the checks that are carried out in the process. The end product is in a format that is amenable to statistical modeling. We analyzed the relationship between species richness across multiple higher taxa observed at 526 sites in temperate forests and vegetation indices, measures of aboveground net primary productivity. We downloaded MODIS derived vegetation index time series for each location where the species richness had been sampled, and summarized the data into three measures: maximum time‐series value, temporal mean, and temporal variability. On average, species richness covaried positively with our vegetation index measures. Different higher taxa show different positive relationships with vegetation indices. Models had high R² values, suggesting higher taxon identity and a gradient of vegetation index together explain most of the variation in species richness in our data. MODISTools can be used on Windows, Mac, and Linux platforms, and is available from CRAN and GitHub ( https://github.com/seantuck12/MODISTools ).     

Secondary Forest Detection in a Neotropical Dry Forest Landscape Using Landsat 7 ETM+ and IKONOS Imagery1

We integrate forest structure and remotely sensed data for four successional stages (pasture, early, intermediate, and late) of a tropical dry forest area located in the Sector Santa Rosa of the Guanacaste Conservation Area in northwestern Costa Rica. We used a combination of spectral vegetation indices derived from Landsat 7 ETM+ medium resolution and IKONOS high‐resolution imagery. The indices (using the red and near‐infrared bands) simple ratio and normalized difference vegetation index separated the successional stages well. Two other indices using mid‐infrared bands did not separate successional stages as well. In a comparison of the successional stages with chronological age, there was no separability in the spectral reflectance among different age classes. Successional stages, in contrast, showed distinct groups with minimal overlap. We also applied a simple validation in another dry forest located in the Palo Verde National Park in the province of Guanacaste, Costa Rica, with reasonably good results.     

FTIR Emission Spectra of Bacteriorhodopsin in a Vibrational Excited-State

Vibrational IR-emission spectra of bacteriorhodopsin (bR) were recorded under continuous illumination with visible light at room temperature. They contain selective information about the chromophore, Schiff base, and opsin. The spectral bands were identified by comparing the data with resonance Raman and IR absorption data. The IR-emission spectra were shown to contain a set of bands characteristic for both all-trans (bR₅₆₈) and 13-cis conformations (K₆₁₀-like intermediate) simultaneously. Variation of spectral composition and the intensity of visible light illumination influenced the spectral traces and intensity distribution between them. Greater intensity of deformational vibrations suggests distorted retinal structure in the vibrationally excited ground electronic state. The origin of the emitting species of bR is discussed.     

Spectral response of the seagrass Zostera noltii with different sediment backgrounds

The efficiency of vegetation indices (VIs) to estimate the above-ground biomass of the seagrass species Zostera noltii Hornem. from remote sensing was tested experimentally on different substrata, since terrestrial vegetation studies have shown that VIs can be adversely influenced by the spectral properties of soils and background surfaces. Leaves placed on medium sand, fine sand and autoclaved fine sand were incrementally removed, and the spectral reflectance was measured in the 400–900 nm wavelength range. Several VIs were evaluated: ratios using visible and near infrared wavelengths, narrow-band indices, indices based on derivative analysis and continuum removal. Background spectral reflectance was clearly visible in the leaf reflectance spectra, showing marked brightness and spectral contrast variations for the same amount of vegetation. Paradoxically, indices used to minimize soil effects, such as the Soil-Adjusted Vegetation Index (SAVI) and the Modified second Soil-Adjusted Vegetation Index (MSAVI₂) showed a high sensitivity to background effects. Similar results were found for the widely used Normalized Difference Vegetation Index (NDVI) and for Pigment Specific Simple Ratios (PSSRs). In fact, background effects were most reduced for VIs integrating a blue band correction, namely the modified specific ratio (mSR₍₇₀₅₎), the modified Normalized Difference (mND₍₇₀₅₎), and two modified NDVIs proposed in this study. However, these indices showed a faster saturation for high seagrass biomass. The background effects were also substantially reduced using Modified Gaussian Model indices at 620 and 675 nm. The blue band corrected VIs should now be tested for air-borne or satellite remote sensing applications, but some require sensors with a hyperspectral resolution. Nevertheless, this type of index can be applied to analyse broad band multispectral satellite images with a blue band.     

Variation in ultraviolet reflectance by carotenoid-bearing feathers of tanagers (Thraupini: Emberizinae: Passeriformes)

Avian visual sensitivity encompasses both the human visible range (400–700 nm) and also near‐ultraviolet (UV) wavelengths (320–400 nm) invisible to normal humans. I used reflectance spectrophotometry to assess variation in UV reflectance for yellow, orange and red plumage in 67 species of tanager (Passeriformes). Previous chemical studies, and my analysis of reflectance minima, suggest that carotenoids are the dominant pigments in yellow, orange and red tanager plumage. Spectra recorded over the range of wavelengths to which birds are sensitive (320–700 nm) were invariably bimodal, with both a plateau of high reflectance at longer (> 500 nm) wavelengths and a distinct secondary peak at UV (< 400 nm) wavelengths. Within this overall framework, variation in UV reflectance was expressed within well‐defined quantitative limits: (1) peak reflectance was always lower than the corresponding plateau of reflectance at longer visible wavelengths; (2) the intensity of peak reflectance declined steadily below 350 nm; (3) wavelengths of peak reflectance clustered between 350 and 370 nm. Significant correlations were detected between various measures of total reflectance in the UV and visible wavebands, but not between various measures of spectral location of UV and visible reflectance. I propose that the strong absorption band at short visible wavelengths (～ 380–550 nm) responsible for bimodal spectra of carotenoids in vitro is also responsible for bimodal reflectance by carotenoid‐based plumage colours. The construction of the UV and visible reflectance bands from different sides of this same absorbance band provides a mechanism for the observed covariation between UV and visible wavelengths. Lack of an association between the spectral locations of the UV and visible reflectance bands may result from the limited variation in spectral location of the UV band. These patterns suggest that plumage colours are subject to constraints, just as are more traditional morphological characters. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 84 , 243–257.     

Assessing species density and abundance of tropical trees from remotely sensed data and geostatistics

Question: What relationships exist between remotely sensed measurements and field observations of species density and abundance of tree species? Can these relationships and spatial interpolation approaches be used to improve the accuracy of prediction of species density and abundance of tree species? Location: Quintana Roo, Yucatan peninsula, Mexico. Methods: Spatial prediction of species density and abundance of species for three functional groups was performed using regression kriging, which considers the linear relationship between dependent and explanatory variables, as well as the spatial dependence of the observations. These relationships were explored using regression analysis with species density and abundance of species of three functional groups as dependent variables, and reflectance values of spectral bands, computed NDVI (normalized difference vegetation index), standard deviation of NDVI and texture measurements of Landsat 7 Thematic Mapper (TM) imagery as explanatory variables. Akaike information criterion was employed to select a set of candidate models and calculate model‐averaged parameters. Variogram analysis was used to analyze the spatial structure of the residuals of the linear regressions. Results: Species density of trees was related to reflectance values of TM4, NDVI and spatial heterogeneity of land cover types, while the abundance of species in functional groups showed different patterns of association with remotely sensed data. Models that accounted for spatial autocorrelation improved the accuracy of estimates in all cases. Conclusions: Our approach can substantially increase the accuracy of the spatial estimates of species richness and abundance of tropical tree species and can help guide and evaluate tropical forest management and conservation.     

小麦叶面积指数与冠层反射光谱的定量关系

在分析不同氮素水平下小麦叶面积指数（LAI）和冠层光谱反射率随生育期变化模式的基础上,确立了LAI与冠层光谱反射率及光谱参数的相关关系,提出了小麦LAI的敏感光谱参数及预测方程.结果表明,小麦LAI和近红外短波段（760～1 220 nm）反射率都随施氮量的增加呈上升趋势,可见光波段反射率则相反;从拔节期到成熟期,LAI和近红外短波段反射率均表现为先上升后下降的趋势,而可见光波段（460～710 nm）反射率随生育期的推进先降低后升高,以孕穗期反射率最低,近红外长波段区域（1 480～1 650 nm）反射率的变化与可见光部分相同.LAI与可见光波段反射率呈负相关,与近红外短波段反射率呈极显著正相关,其中以810 nm相关性最好.可以选择RVI(810,510)和DVI(810,560)作为反演小麦LAI的光谱参数.另外,在证明垂直植被指数PVI和转换型土壤调整指数TSAVI对LAI预测能力的同时,发现利用RVI(810,510)、DVI(810,560)和PVI 3个植被指数共同推算小麦LAI的准确度更高.     

Maximizing plant species inventory efficiency by means of remotely sensed spectral distances

Aim Inventorying plant species in an area based on randomly placed quadrats can be quite inefficient. The aim of this paper is to test whether plant species richness can be inventoried more efficiently by means of a spectrally‐based ordering of sites to be sampled. Location The study area was a complex wetland ecosystem, the Lake Montepulciano Nature Reserve, central Italy. This is one of the most important wetland areas of central Italy because of the diverse plant communities and the seasonal avifauna. Methods Field sampling, based on a random stratified sampling design, was performed in June 2002. Plant species composition was recorded within sampling units of 100 m² (plots) and 1 ha (macroplots). A QuickBird multispectral image of the same date was acquired and corrected both geometrically and radiometrically. Species accumulation curves based on spectral information were obtained by ordering sites to be sampled according to a maximum spectral distance criterion (i.e. by ordering sampling units based on the maximum distances among them in a four‐dimensional spectral space derived from the remotely sensed data). Different distance measures based on mean and maximum spectral distances among sampling units were tested. The performance of the species accumulation curve derived by the spectrally‐based ordering of sampling units was tested against a rarefaction curve obtained from the mean of 10,000 accumulation curves based on randomly ordered sampling units. Results The spectrally‐derived curve based on the maximum spectral distance among sampling units showed the most rapid accumulation of species, well above the rarefaction curve, at both the plot and the macroplot scales. Other ordering criteria of sampling units captured less richness over most of the species accumulation curves at both the spatial scales. The accumulation curves based on other measurements of distance were much closer to the random curve and did not show differences with respect to the species rarefaction curve based on random ordering of sampling units. Main conclusions The present investigation demonstrated that spectral‐based ordering of sites to be sampled can lead to the maximization of the efficiency of plant species inventories, an activity usually driven by the ‘botanist's internal algorithm’ (intuition), without any formalized rule to drive field sampling. The proposed approach can reduce costs of plant species inventorying through a more efficient allotment of time and sampling.     

Does using species abundance data improve estimates of species diversity from remotely sensed spectral heterogeneity?

Different approaches for the assessment of biodiversity by means of remote sensing were developed over the last decades. A new approach, based on the spectral variation hypothesis, proposes that the spectral heterogeneity of a remotely sensed image is correlated with landscape structure and complexity which also reflects habitat heterogeneity which itself is known to enhance species diversity. In this context, previous studies only applied species richness as a measure of diversity. The aim of this paper was to analyze the relationship of richness and abundance-based diversity measures with spectral variability and compare the results at two scales. At three different test sites in Central Namibia, measures of vascular plant diversity was sampled at two scales – 100 m² and 1000 m². Hyperspectral remote sensing data were collected for the study sites and spectral variability, was calculated at plot level. Ordinary least square regression was used to test the relationship between species richness and the abundance-based Shannon Index and spectral variability. We found that Shannon Index permanently achieved better results at all test sites especially at 1000 m², Even when all sites where pooled together, Shannon Index was still significantly related with spectral variability at 1000 m². We suggest incorporating abundance-based diversity measures in studies of relationships between ecological and spectral variability. The contribution made by the high spectral and spatial resolution of the hyperspectral sensor is discussed.