麝鼠肠道纤维素分解菌的分离鉴定及其酶学特性分析

本研究旨在从麝鼠(Ondatra zibethicus)肠道中分离出高效分解纤维素的菌株,为开发纤维素分解菌微生物制剂提供菌种资源。本研究利用以羧甲基纤维素钠(CMC-Na)为单一碳源的培养基,从麝鼠盲肠内分离出--株高效分解纤维素的菌株WJ-3,并对该菌株进行形态鉴定、生理生化鉴定和16S.rDNA分子鉴定。对菌株WJ-3所产羧甲基纤维素酶(CMCase)进行酶学特性实验,分析此纤维素酶的最佳反应pH和最佳反应温度,以及此纤维素酶对不同温度和不同酸碱度的耐受性。结果表明,菌株WJ-3属于空气芽孢杆菌(Bacillus aerius),并将其命名为Bacillus aerius WJ-3。菌株WJ-3所产羧甲基纤维素酶在pH 4.0~6.0的范围内反应时,酶活性随pH值升高而增加,其最佳反应pH为6.0,且此纤维素酶在pH4.0~8.0范围内保存30min后均能保持80%以上的相对酶活性:菌株WJ-3所产羧甲基纤维素酶在温度30~50 ℃范围内反应时,随温度上升酶活性逐渐增加,在50 ℃时酶活性最高,之后随温度的升高酶活性逐渐下降,且纤维素酶在此温度范围内保存30 min后均能保持较高的酶活性。综上所述,菌株Bacillus aerius WJ-3所产羧甲基纤维素酶的酶活性较高,并且此纤维素酶的耐酸碱性及热稳定性良好,是具有一定利用价值的菌种资源。     

云斑白条天牛幼虫肠道纤维素降解菌的分离鉴定及产酶条件的优化

为筛选云斑白条天牛[Batocera lineaolata(Chaevroat)]幼虫肠道中高效纤维素降解菌,实现纤维素的高效利用,以羧甲基纤维素钠为唯一碳源,并利用刚果红平板染色法初筛、纤维素酶活测定复筛,从云斑白条天牛幼虫肠道中分离产纤维素酶菌株;采用形态学观察和16S rDNA基因序列同源性分析方法对该菌株进行鉴定,单因素试验法对菌株的产酶条件进行优化。结果表明:从45株纤维素降解菌中通过刚果红染色获得2株高效产纤维素酶菌株A04、A07,鉴定分别为苍白杆菌属(Ochrobactrum)A04、拉乌尔菌属(Raoultella)A07。初步确定苍白杆菌属A04在温度32℃、初始pH=6、以酵母膏为氮源条件下滤纸酶(FPase)活力最大;拉乌尔菌属A07产纤维素酶在温度32℃、初始pH=7、以酒石酸铵为氮源条件下FPase活力最大。     

铜绿丽金龟蛴螬肠道产消化酶细菌的分离与鉴定

目的分离不同生态环境中铜绿丽金龟蛴螬肠道中产消化酶细菌,明确生态环境和食物对其肠道共生细菌产酶活性的影响。方法 2016年7月,自野外林间废弃的菜园和花生田分别采集蛴螬,鉴定出铜绿丽金龟蛴螬后,采用传统分离培养法对其肠道中的共生细菌进行分离鉴定,利用平板透明圈法分别进行淀粉酶、蛋白酶、脂肪酶和纤维素酶等的分泌能力测定。结果自铜绿丽金龟蛴螬肠道中共分离出细菌24株,其中在野生铜绿丽金龟蛴螬体内分离出9株,花生田铜绿丽金龟蛴螬体内分离出15株。野生蛴螬体内分离的细菌中,产淀粉酶菌株1株,产蛋白酶菌株4株,产纤维素酶菌株1株,产脂肪酶菌株1株;花生田蛴螬体内分离的细菌中,产淀粉酶菌株1株,产蛋白酶菌株3株,产纤维素酶菌株9株,未分离到产脂肪酶的菌株。结论野生铜绿丽金龟蛴螬肠道细菌中产蛋白酶种类较多,占44.4%;花生田铜绿丽金龟蛴螬肠道细菌中产纤维素酶菌株最多,所占比例可达60.0%,反映出生境和食性与昆虫肠道共生细菌产消化酶活性的相适应性。     

一株高效降解纤维素菌株的筛选及其产酶能力研究

目的筛选并鉴定一种产纤维素酶能力较高的菌株,为纤维素的高效利用贮备菌源。方法用羧甲基纤维素钠(CMC-Na)平板筛选产纤维素酶菌株,通过LB培养基对其进行纯化,16SrDNA基因序列分析其分类地位,3,5-二硝基水杨酸法(DNS)测定其产酶能力。结果分离纯化得到的产纤维素酶菌株(S1)为芽胞杆菌属(Bacillus genus)的短小芽胞菌,在最佳产酶条件下产酶含量达到1 204U/mL,产纤维素酶能力与里氏木霉(Trichoderma reesei)相当,但其产酶速率较里氏木霉低。结论 S1是一株产纤维素酶能力较高的菌株,产酶条件温和,初步鉴定为一种新种,具有较高研究及应用价值。     

一株纤维素降解细菌的筛选、鉴定及产酶条件分析

目的筛选高活性的纤维素降解细菌,并进行初步鉴定和产纤维素酶条件分析。方法采集吉首旗帜山松树林的土壤样品,通过富集培养和刚果红平板染色法筛选分离纤维素降解细菌;通过形态观察、生理生化特性检测和基于16S rRNA基因序列的系统发育分析对分离的菌株进行初步鉴定。利用单因素实验对产纤维素酶条件进行优化。结果分离获得1株高活性纤维素降解细菌JDM11,初步鉴定其为Bacillus velezensis;菌株JMD11产纤维素酶最佳培养温度、最适初始pH和培养时间分别为28℃、7.0～7.5和32h,在该条件下其滤纸酶(FPase)和羧甲基纤维素酶(CMCase)活力分别为260.32U/ml和651.75U/ml。结论菌株JDM11是1株高活性纤维素降解的Bacillus velezensis。     

大熊猫肠道纤维素分解菌的分离鉴定及产酶性质

【目的】从健康大熊猫新鲜粪便中分离具有纤维素酶活性的菌株,并对其进行菌种鉴定及产酶性质研究。【方法】利用羧甲基纤维素钠培养基分离纯化具有较高纤维素酶活性的菌株,根据形态学特征、生理生化特性以及16S rDNA分析对其进行分类鉴定,研究影响该菌株纤维素酶的产酶条件,以及对不同纤维素底物的降解情况。【结果】分离得到一株纤维素酶产生菌株P2,该菌株为好氧的革兰氏阳性细菌,生长温度范围20-50℃(最适温度37℃),pH范围6.0-9.0(最适pH7.0),NaCl浓度范围0%-15%(最适2%NaCl),培养24h达到产酶高峰。16S rDNA基因序列分析显示,菌株P2与解淀粉芽胞杆菌(Bacillusamyloliquefaciens)NBRC15535相似性为99.66%。该菌株对四种纤维素底物(滤纸、脱脂棉、秸秆、竹纤维)均有不同程度的降解,内切葡聚糖酶、外切葡聚糖酶、β-葡萄糖苷酶和总酶活具有不同的酶活变化。【结论】本研究首次从大熊猫粪便中分离出了好氧纤维素分解菌,并鉴定为解淀粉芽胞杆菌,对上述四种纤维结构均有一定的破坏和分解作用,为进一步研究大熊猫竹纤维消化机制提供了菌源。     

分解玉米赤霉烯酮菌株的分离、鉴定及其产酶特征

【目的】从发酵食品材料中筛选出对玉米赤霉烯酮(ZEN)有分解作用的微生物,研究其分解效率及产酶特征并进行菌种鉴定。【方法】利用添加ZEN毒素类似物(PL)的固体培养基对25种发酵食品材料进行初筛,获得毒素类似物耐受菌株,经过用ZEN复筛,得到高效分解ZEN的细菌。用高效液相色谱法(HPLC)分析培养物残留ZEN,评价菌株对ZEN的分解效率。初步分析该菌株产纤维素酶、木聚糖酶及β-葡萄糖苷酶的特性。通过微生物形态学、分子生物学方法进行菌种鉴定,确定该菌的系统分类学地位。【结果】从发酵食品材料中筛选出一株分解ZEN的菌株BF-B-3,经初步鉴定该菌株为枯草芽孢杆菌(Bacillus subtilis)。其ZEN分解率达62.48%,测定该菌产纤维素酶、木聚糖酶及β-葡萄糖苷酶活力分别为160.38、84.51和4.14 U/mL。【结论】枯草芽孢杆菌属于饲用微生物,生物安全性高,所分离到的枯草芽孢杆菌疑似株(Bacillus subtilis)BF-B-3菌株,可作为具有分解ZEN功能的益生菌使用,具有较好的应用前景。     

思茅松毛虫肠道真菌分离鉴定及水解酶活性初步研究

肠道微生物在昆虫的食物消化、免疫防御中发挥重要作用,但目前对昆虫肠道真菌了解不多。本研究以重要林业害虫—思茅松毛虫Dendrolimu kikuchii Matsumura为材料,分离鉴定其幼虫中的肠道真菌。采用传统微生物分离纯培养的方法从思茅松毛虫4龄幼虫肠道样品中分离肠道真菌,运用ITS序列分析鉴定,并对其产酶活性初步研究。经同源序列比对分析,思茅松毛虫4龄幼虫肠道中共分离得到12株真菌,分别属于德巴利酵母属Debaryomyces sp.,拟盘多毛孢属Pestalotiopsis sp.,青霉属Penicillium sp.,弯担菌属Curvibasidium sp.。产酶活性研究表明8株菌产纤维素酶,9株菌产淀粉酶,7株菌产脂肪酶,2株菌产蛋白酶。DKF-8产淀粉酶能力最高,酶活力是60.907 U/mL。DKF-10产纤维素酶能力最高,酶活力是14.276 U/g,菌株DKF-6产蛋白酶活力是5.561 U/mL,菌株DKF-8产蛋白酶酶活力是2.918 U/mL。思茅松毛虫4龄幼虫肠道真菌物种丰富度较低。本实验为未来深入研究思茅松毛虫肠道微生物功能提供了菌株材料。     

黑胸散白蚁肠道具内切葡聚糖酶活性共生菌的筛选、鉴定及产酶条件的优化

目的 从黑胸散白蚁肠道内筛选获得具有降解纤维素性能的菌株,并对菌株最佳产酶条件进行优化.方法 采用筛选性培养基进行筛选,通过培养性状、显微观察及16S rDNA部分片段同源性分析进行菌种鉴定,利用正交试验优化该菌株的最佳产酶培养基配方以及单因子试验优化产酶培养条件.结果 通过鉴定,获得的菌株属柠檬酸杆菌属(Citrobacter sp.B03),最适产酶的碳氮源为CMC-Na和蛋白胨.该菌株最佳产酶培养基的配方为CMC-Na5.0 g/L、蛋白胨5.0 g/L、NH4Cl 0.6 g/L、KH2P04 0.9 g/L、MgSO4 0.9 g/L;最佳产酶培养条件为起始pH 5.0,温度35℃,装液量20～ 30 mL/150 mL.结论 经过优化,可将该菌株产生的纤维素酶酶活力从0.184 U/mL提高到0.311 U/mL,该研究结果对纤维素酶的工业开发具有一定的指导意义.     

柚子皮黑曲霉的分离鉴定及产酶特性研究

对柚子皮上自然生长的黑曲霉进行分离鉴定,并探讨其产酶特性。以平板稀释法从柚子皮上分离出一株霉菌菌株,通过观察其形态特征和培养特征,对照《真菌鉴定手册》判定该菌株的种属;采用鉴定培养基法对其产酶特性进行分析。根据柚子皮的成分特性,以干柚子皮为主要原料,该菌为生产菌株,采用固态发酵法探究培养基的成分、柚子皮含量、培养基初始含水量及发酵时间4个因素对纤维素酶活力的影响。结果表明,该菌株为黑曲霉(Aspergillus nige),可产淀粉酶、蛋白酶、纤维素酶、果胶酶;固态发酵培养基中添加柚子皮12g,麸皮0.5 g和(NH_4)_2SO_40.5 g,培养基初始含水量保持在68.5 mL/100 g,培养时间控制在60 h左右时纤维素酶产量较高。     

饲用微生物的分离鉴定及其对杏鲍菇菌糠发酵的效果

【目的】菌糠的营养素含量齐全,但纤维素含量过高是阻碍其饲料化利用的主要因素。故本研究筛选适合于发酵杏鲍菇菌糠的微生物菌株,以改善其饲用品质。【方法】首先,本研究采用纤维素-刚果红、苯胺蓝和MRS-Ca (De Man, Rogosa, Sharpe-Ca)筛选培养基,结合纤维素、木质素酶活力及抑菌活性的测定,从EM (effective microorganisms)原液发酵的杏鲍菇菌糠中分离筛选具有较强纤维素、木质素降解能力及抑菌能力的细菌/真菌。通过细菌16S rRNA和真菌18S rDNA基因序列分析确定菌株所属种属。其次,将筛选出的菌株菌液等体积混合制成复合菌剂用于固态发酵杏鲍菇菌糠。测定不同发酵时长菌糠营养成分含量以确定最佳发酵时间,并与相同工艺条件下EM原液发酵的杏鲍菇菌糠进行饲用品质比较。【结果】筛选并鉴定得到纤维素酶活性较高的特基拉芽孢杆菌(Bacillus tequilensis)菌株P11、发酵毕赤酵母(Pichia fermentans)菌株R8和马克斯克鲁维应变酵母(Kluyveromyces marxianus)菌株MU5;木质素酶活性较高的解淀粉芽孢杆菌(Bacillus amyloliquefaciens subsp.plantarum)菌株MU7;抑菌活性较高的类肠膜魏斯氏菌(Weissella paramesenteroides)菌株R4和乳酸片球菌(Pediococcus acidilactici)菌株R9。使用以上菌株复合发酵杏鲍菇菌糠7 d后,各项指标达到稳定。与EM原液发酵的杏鲍菇菌糠相比,复合菌剂发酵杏鲍菇菌糠的NDF和ADF分别显著降低了19.6%和21.44%(P0.05);CP (crude protein)、CA (crude ash)和EE (ether extract)含量分别显著提高了10.44%、5.26%和123.53%(P0.05)。【结论】本研究筛选得到的芽孢杆菌、酵母菌和乳酸菌优势菌株复合后用于发酵杏鲍菇菌糠可以很好地改善其饲用品质,效果优于生产中常用市售EM原液。     

Long-term stability of the seasonal succession of different zooplankton species in a brackish water lagoon (southern Baltic Sea)

While it has been widely suggested that freshwater fishes from East Asia invaded the western Palaearctic, details about this process are largely unknown. Here, using the cytochrome b gene, we evaluated the phylogenetic relationships of a small group of Eurasian primary freshwater fishes (Cobitidae), which are widely distributed and species rich in East Asia and Europe, with the purpose of inferring their invasion process of Europe from East Asia. Though phylogenetic relationships of cobitids were not well resolved, our analysis could identify three sister groups formed by the European and East Asian cobitids, which brought new insights into the biogeography of the genera Cobitis, Misgurnus, and Sabanejewia. The present results support the view that Asian cobitid fishes may have invaded Europe at least five times independently, and once reverse colonization of European cobitids to East Asia could also be found. Ancestral Sabanejewia might have been the first cobitids to cross Siberia and invade the EMZS (Euro-Mediterranean zoogeographic subregion) about 33.54 million years ago (MYA). One lineage of Cobitis and the ancestor of Misgurnus fossilis (Linnaeus) almost in the same time invaded the Europe, responding to 16.71 MYA and 16.59 MYA, respectively. Three different lineages of Cobitis were found to have invaded the EMZS from East Asia, and once reverse invasion to East Asia occurred to one subclade of European Cobitis. And our data also suggest that the diversity of East Asian cobitid fishes, especially of the genus Cobitis, is greatly underestimated. Handling editor: C. Sturmbauer     

西藏飞蝗蝗蝻群集迁移特性及其群集效应

西藏飞蝗Locusta migratoria tibetnsis Chen暴发成灾的重要原因之一是蝗蝻具有群集迁移危害习性。为阐明西藏飞蝗灾变的行为机制,为西藏飞蝗的监测预警和防治提供科学依据,利用视频跟踪技术测定了自然环境中西藏飞蝗蝗蝻群集迁移的运动速度、方向,建立自推进粒子模型模拟蝗蝻群集迁移行为,分析群集迁移效应。结果表明,①不同自然环境中的西藏飞蝗蝗蝻在群集迁移过程中,群体内个体的运动表现出定向集体运动,群集迁移速度为0.1256 m/s,0.2 m以内的个体蝗蝻方向趋向一致。沙滩、翻耕农田和草地蝗蝻群运动一致性参数均较高,分别为0.8502、0.7870和0.6987。②西藏飞蝗蝗蝻群由分散运动转变为群集迁移存在临界密度,密度较低时群体内个体分散运动,当蝗蝻密度达到12-15头/m²时,蝗蝻群体由分散运动转变为高度一致的群集迁移运动。③蝗蝻群通过群集迁移可以显著增加迁移距离,随机运动蝗蝻1 d扩展只有70-80 m,而群集迁移1 d最大距离可达2.5 km。蝗蝻群集迁移可以提高发现特别是远距离食物等资源的概率,使群体中更多的个体受益。④尽管未发现室外蝗蝻群存在先验个体,但模拟发现在群集迁移群体中,只需要少数先验个体（3%-5%）即可引导整个蝗蝻群运动。     

水产源芽胞杆菌的分离鉴定及生物学功能分析

筛选具有较好生物学功能的芽胞杆菌(Bacillus),用以改善池塘养殖过程饲料等有机物降解、抑制水体中的病原菌,对从健康养殖鱼虾塘水体中分离的菌株,进行生化试验和16S rDNA序列分子鉴定;通过产酶、耐酸、耐高温试验,抑菌试验以及安全性试验研究分离菌株的生物学功能。试验共筛选出8株细菌,经生化试验及16S rDNA序列的分子鉴定,确定菌株ZHX17、ZHX18、ZHX31为贝莱斯芽胞杆菌（Bacillus velezensis）,菌株ZHX14、ZHX15为地衣芽胞杆菌（Bacillus licheniformis）、菌株NSX4、NSX7、NSX9为枯草芽胞杆菌（Bacillus subtilis）。试验结果表明,8株芽胞杆菌均具有较强的耐酸、耐高温特性,其中3株贝莱斯芽胞杆菌具有较强的分泌淀粉酶、纤维素酶、蛋白酶的能力,抑菌效果好于其他5株芽胞杆菌。安全性试验结果表明,8株芽胞杆菌对草鱼、罗非鱼相对安全。8株芽胞杆菌同时具备分泌淀粉酶、纤维素酶和蛋白酶3种胞外酶的能力,其中贝莱斯芽胞杆菌具有较强的病原菌抑菌能力,可以作为病原拮抗益生菌做进一步研究。     

The participation of the cell wall hydrolytic enzymes in the initial colonization of Azospirillum brasilense on wheat roots

The effect of cellulase and pectinase on bacterial colonization of wheat was studied by three different experiments. In the first experiment, the root colonization of 3 wheat cultivars (Ghods, Roshan and Omid) by two A. brasilense strains (Sp7 and Dol) was compared using pre-treated roots with cellulase and pectinase, and non-treated with these enzymes (control). Although the root colonization varied greatly among strain-plant combinations in controls, the pre-treatment of roots with polysaccharide degrading enzymes significantly increased the bacterial count in roots, regardless of the strain-plant combination. This might be an indication that cell wall may act as an important factor in plant-Azospirillum interaction. In the second experiment, the root cellulase activity of the same wheat cultivars treated with and without the two Azospirillum brasilense, strains (Sp7 and Dol) was compared. The pre-treatment of wheat roots with Azospirillum enhanced the cellulase activity of wheat root extracts. Thus, the cellulase activity might participate in the initial colonization of wheat roots by Azospirillum. The comparison of the cellulase activity of root extracts within inoculated and non-inoculated seedlings showed that the inoculation had enhanced the cellulase activity in root extracts, but this effect was directly dependent on the strain-plant combination. Strain Sp7 stimulated the highest cellulase activity in cv. Roshan, but strain Dol induced the highest enzyme activity in cv. Ghods. In the third experiment, several growth parameters of those 3 wheat cultivars treated with and without those two bacterial strains (Sp7 and Dol) were compared. The highest magnitude of growth responses caused by Sp7 strain was in the cv Roshan, but Dol strain stimulated the highest growth in cv Ghods. Therefore, effective colonization may contribute to more growth responses.     

里氏木霉组成型表达siRNA干扰cre1基因对纤维素酶表达的调控作用

使用组成型siRNA干扰载体对里氏木霉碳阻遏抑制因子CRE1进行siRNA干扰以研究其对里氏木霉纤维素酶基因表达的调控作用。根据里氏木霉cre1基因序列设计siRNA干扰片段。利用里氏木霉组成型表达载体将干扰片段分别构建至里氏木霉cre1干扰载体并将其转化里氏木霉QM9414。分别在48和144 h对各转化子进行纤维素酶酶活力测试(CMC酶活力测试和滤纸酶活力测试)及利用qPCR检测相关基因的表达。在诱导144 h时转化子的两种酶活力平均约比出发菌株高出1倍。qPCR检测cre1基因的表达结果表明,转化子的cre1表达量比出发菌株平均降低约50%,而ace1基因表达量变化不大。其他纤维素酶相关基因的表达水平也均高于出发菌株。通过组成型表达siRNA干扰里氏木霉cre1基因可以明显调控纤维素酶基因的表达,为研究纤维素酶的基因表达与调控提供参考。     

Regulatory mutations affecting the synthesis of cellulase in Bacillus pumilus

A wild strain of Bacillus pumilus was investigated for cellulase production, and putative mutants of this strain were screened for catabolite repression insensitivity after chemical mutagenesis using ethyl methanesulphonate (EMS) as a mutagenic agent. Out of four classes of mutants studied and classified according to their cellulase induction rate and level of cellulase production in the presence of high concentrations of glucose (2.6%[w/v]), classes III and IV exhibited cellulase production up to 6.2 mg cellulase and 11.4 mg cellulase per gram of dry cell mass respectively. These mutants were referred to as catabolite repression-insensitive when compared to the wild strain which exhibited a total repression of cellulase synthesis under the same conditions. How EMS triggered the catabolite repression insensitivity in these mutants was not established. However this mutation brought out new strains of cellulase hyperproducers (mutants 6 and 11) in the presence of glucose when compared to other cellulase producers such as Aspergillus terreus, A. nidulans and Trichoderma reesei, which exhibited catabolite repression of cellulase synthesis. These mutants were selected as the most promising candidates for cellulase synthesis even at high glucose concentration.     

Molecular diversity of oligotrophic and neurotropic members of the black yeast genus Exophiala,with accent on E. dermatitidis

Analysis of ITS rDNA of the black yeast Exophiala dermatitidis revealed a close phylogenetic relationship to the meristematic fungus Sarcinomyces phaeomuriformis. As most strains ofS. phaeomuriformis have a yeast-like phenotype corresponding to the anamorph genus Exophiala, a new combination in Exophiala is proposed. On the basis of ITS sequence, M-13 fingerprint and SSU intron data, two main entities could be distinguished within E. dermatitidis. One of these (B) contained prevalently strains from environmental sources, while the other (A) mainly comprised strains from clinical sources. This may be due to a difference in virulence. All strains from severe brain and disseminated infections in East Asia clustered in group A. However, strains of group A caused a relatively mild fungemia in patients outside East Asia. This revised version was published online in June 2006 with corrections to the Cover Date.     

Screening of highly cellulolytic fungi and the action of their cellulase enzyme systems

Over 100 strains of wood-rotting fungi were compared for their ability to degrade wood blocks. Some of these strains were then assayed for extracellular cellulase [1,4-(1,3;1,4)-β- -glucan 4-glucanohydrolase, EC 3.2.1.4] activity using a variety of different solid media containing carboxymethyl cellulose or acid swollen cellulose. The diameter of clearing on these plates gave an approximate indication of the order of cellulase activities obtained from culture filtrates of these strains. Trichoderma strains grown on Vogels medium gave the highest cellulase yields. The cellulase enzyme production of T. reesei C30 and QM9414 was compared with that of eight other Trichoderma strains. Trichoderma strain E58 had comparable endoglucanase and filter paper activities with the mutant strains while the β- -glucosidase [β- -glucoside glucohydrolase, EC 3.2.1.21] activity was approximately six to nine times greater.