Making a pituitary gland in a dish

The adenohypophysis secretes multiple hormones that control vital physiological functions. A recent article in Nature (Suga et al., 2011) describes a 3D protocol for the derivation of several endocrine pituitary cell types from mouse ESCs.     

Transpiration in a eucalypt plantation and a savanna in Venezuela

In Venezuela 30,000?km² of land is covered by savannas, of which 410,000?ha have been planted with several species and hybrids of Eucalyptus for lumber and pulp production. Popular concern about possible diminutions in water availability of reservoirs near eucalypt plantations prompted our interest in measuring water use by these trees. Since these savannas are markedly seasonal, the response of species to seasonal drought is important. We aimed to compare the seasonal changes in single-leaf and whole-plant transpiration in a seasonally dry savanna with that of trees of E. urophylla in an experimental plantation. We also examined the seasonal changes in xylem water potential and stomatal response to air water-vapour saturation deficit (D). Transpiration in eucalypts and the dominant savanna species Trachypogon vestitus and Curatella americana was evaluated using measurements of leaf gas exchange in all three species, sap flux in eucalypts, microclimatic variables and allometric and photometric determinations of green area. In E. urophylla and T. vestitus, but not in C. americana, stomatal conductance (g _s) proved sensitive to D. Integrated values of daily courses of transpiration rate were scaled to one ha in a preliminary approach to estimating ecosystem transpiration (E _ha). The E _ha of the savanna (the sum of E _ha of T. vestitus and C. americana) was on average 2.4 times that of eucalypts during the daytime; when nocturnal eucalypt transpiration was included, the value was 1.9. The evapotranspiration calculated by the Penman–Montieth equation (ET_c) of eucalypts was lower than the savanna all year round. The reference crop ET (ET_o) varied little throughout the seasons, the highest value occurring in March. The ratio E _ha/ET_o for the savanna was on average near one during the dry season and almost two during the rainy season; the corresponding value for E. urophylla was 0.6 for both seasons. The ratio E _ha/ET_c was on average 0.8 for the species and the savanna. The cumulative E _ha for the days of measurements was higher in the savanna than in the eucalypts during the daytime (39.8 and 17.3?mm, respectively), as was the cumulative ET_c (37.5 vs. 20.3?mm). Measured and calculated cumulative ET in eucalypts, including nocturnal values, were 22.0 and 28.4?mm, respectively. At the leaf level, both eucalypts and trees of C. americana apparently may have accessed water from deep horizons, since their values of Ψ changed less seasonally than in T. vestitus. At the ecosystem level, the species that presented the largest changes in transpiration was T. vestitus, which markedly increased savanna transpiration during the rainy season. Our results suggest that, for the days of this study, and considering the environmental conditions of the ecosystems studied, the type of measurements and the scaling procedures, stands of E. urophylla transpire less water than the savanna.     

Three-body collisions in a plasma in a strong laser field

Electron-ion collisions in a high-density plasma in strong electromagnetic fields are considered. The applicability condition for the approximate model of pair collisions in strong fields are determined. It is shown that this condition is identical to the condition for the plasma to be transparent. Investigations were carried out by the test particle method generalized to the case of several scattering centers. An accurate calculation of short-range collisions is provided by a “jump” method that is based on the exact solution to the problem of the motion of a particle in a Coulomb potential. This method can also be applied in other approaches to simulating a collisional plasma (such as particle-in-cell and molecular dynamics methods).     

Multiple mutations in a specific gene in a small population

Hereditary diseases have been reported with relatively high frequency in some small populations. Founder effect and genetic drift, associated or not with selective advantage of heterozygotes in case of recessive diseases, are the main explanations. Therefore, if we consider one population and one particular disease, only one deleterious allele should be observed.Determination of mutations has shown that in most cases the situation is more complex; more than one mutation is found among the patients. This finding can be explained by a multiple founder effect, with genetic drift and new mutations.     

Evolution of a Langmuir wave in a weakly inhomogeneous plasma in a longitudinal electric field

The spatial evolution of a Langmuir wave excited by external sources in a weakly inhomogeneous electron plasma in a longitudinal electrostatic field is considered. It is shown that, in a longitudinal electrostatic field, a Langmuir wave can only be amplified in an inhomogeneous plasma provided that the current of trapped electrons exceeds that of untrapped electrons. In this case, as the wave propagates through the inhomogeneous region where its phase velocity increases, some untrapped electrons become trapped in the wave potential wells. As a result, the current of trapped electrons increases and the wave is amplified. Moreover, in the regions where the bulk electrons are localized, the minima of the wave are amplified to a greater extent than its maxima.     

Tachyarrhythmia in a baboon: a case report

An adult baboon with multiple organ symptomatology and tachycardia was successfully treated with one-time electrical cardioversion. The case is presented to demonstrate the need to include ECG monitoring in diagnostic assessment of primate animals with nonspecific symptoms.     

Prostatectomy in a county hospital; a review of 677 cases in a six-year period

Transurethral procedures were used in 620 of 677 cases in which prostatectomy was done (principally by residents supervised by a urologist) at a county hospital in a six-year period. Open operations were used in the other 57 cases. Results were classified as "excellent" in 46.8 per cent of the transurethral cases and as "good" in 36.3 per cent.     

Testing a Primary and a Secondary Endpoint in a Group Sequential Design

Summary We consider a clinical trial with a primary and a secondary endpoint where the secondary endpoint is tested only if the primary endpoint is significant. The trial uses a group sequential procedure with two stages. The familywise error rate (FWER) of falsely concluding significance on either endpoint is to be controlled at a nominal level α. The type I error rate for the primary endpoint is controlled by choosing any α‐level stopping boundary, e.g., the standard O'Brien–Fleming or the Pocock boundary. Given any particular α‐level boundary for the primary endpoint, we study the problem of determining the boundary for the secondary endpoint to control the FWER. We study this FWER analytically and numerically and find that it is maximized when the correlation coefficient ρ between the two endpoints equals 1. For the four combinations consisting of O'Brien–Fleming and Pocock boundaries for the primary and secondary endpoints, the critical constants required to control the FWER are computed for different values of ρ. An ad hoc boundary is proposed for the secondary endpoint to address a practical concern that may be at issue in some applications. Numerical studies indicate that the O'Brien–Fleming boundary for the primary endpoint and the Pocock boundary for the secondary endpoint generally gives the best primary as well as secondary power performance. The Pocock boundary may be replaced by the ad hoc boundary for the secondary endpoint with a very little loss of secondary power if the practical concern is at issue. A clinical trial example is given to illustrate the methods.     

Decay instability of a laser pulse propagating in a transverse direction in a magnetized plasma

The decay instability of a lser pulse propagating across an external magnetic field in a subscritical plasma is investigated analytically and numerically. It is shown that, when the relaxation of the pulse is taken into account, the hydrodynamic growth rate of the decay instability is slower than that obtained earlier in the constant-amplitude pump wave approximation. The results of numerical simulations by a particle-in-cell method demonstrate that an increase in the amplitude of the parametrically excited waves is accompanied by a decrease in their group velocity; in this case, up to 85% of the laser energy is converted into the energy of the plasma particles. It is found that, under resonance conditions, the magnetic field acts to increase the energy of the accelerated ions that escape from the plasma slab through its front boundary.     

Effect of a change in step direction from a forward to a lateral target in response to a sensory perturbation

The aim of the current study was to investigate the response of healthy older and young adults to a change in step direction from a forward to a lateral target in response to a sensory perturbation. Nine healthy older (75.1 ± 6.7 years; age range, 65–81 years) and nine young adults (27 ± 3.6 years; age range, 23–31 years) participated in the study. The sensory perturbation was a visual cue presented at random times while subjects stepped over an obstacle from quiet stance. For both young and elderly subjects there was an abrupt change in the slope of both shear ground reaction forces (GRFs) of the stance limb following the perturbation. The slope and peak of the change in GRFs was greater for the young subjects and the onset significantly earlier (205 ms compared to 271 ms). Changes in the GRFs were accompanied by an increase in bilateral gluteus medius and stance limb soleus activity. A late visual cue resulted in a delayed response for elderly subjects. These data show that a stepping response to a sensory perturbation was both delayed and of less magnitude for older adults which has implications for fall risk.     

The phosphorus-chlorophyll a relationship in periphytic communities in a controlled ecosystem

The correlation between total dissolved phosphorus input concentrations and periphytic chlorophyll a concentrations was examined after a four-week colonization period on artificial substrates in large, continuous-flow microcosms. A significant correlation was established; the data produced a linear regression and substantiated a recently proposed curvilinear regression analysis. The curvilinear equation can be used in future microcosm studies as a predictive aid for regulating phosphorus input concentrations.     

Forging a biodiversity ethic in a multicultural context

New Zealand belongs to the Pacific region, a part of the world where human impacts have been both very recent and extreme in their effect. The New Zealand natural environment is rich in endemic taxa, but these are poorly equipped to cope with the effects of invasion by humans and exotic animals and plants. Polynesian immigrants brought to New Zealand a distinctive world view which gave rise to both tribal traditions and living traditions of the Maori. The resultant environmental ethic emphasises guardianship and stewardship, establishment of the right to use a resource, kinship obligations, and a balance between pairs of opposites. Nineteenth-century European colonists were ambivalent in their view of the environment, although a world view which emphasises dominion has tended to dominate. Two recent developments which are important factors in development of a multicultural biodiversity ethic are the enactment of the Resource Management Act 1991 and legal recognition of the principles of the Treaty of Waitangi. The intersection of these developments provides an opportunity to develop a new approach to environmental ethics especially in conceptualising significance, consultative processes, and developing a holistic and ecocentric use of resources.     

Superdiffusion in a Model for Diffusion in a Molecularly Crowded Environment

We present a model for diffusion in a molecularly crowded environment. The model consists of random barriers in a percolation network. Random walks in the presence of slowly moving barriers show normal diffusion for long times but anomalous diffusion at intermediate times. The effective exponents for square distance vs time usually are below one at these intermediate times, but they can also be larger than one for high barrier concentrations. Thus, we observe sub- and superdiffusion in a crowded environment.     

Stand dynamics during a 12-year period in a second-growth stand in a cool temperature forest in northern Japan

In 1981 and 1993, trees over 2 m high were measured and mapped to clarify stand dynamics in two permanent plots of 0.1 ha in a secondary, cool temperate, mixed broadleaf/conifer forest after logging in the Tomakomai Experiment Forest, central Hokkaido, northern Japan. The species could be placed in two groups according to the change in basal area and density, and annual height growth:Quercus mongolica var.grosseserrata, Phellodendron amurense, Prunus sargentii andTilia japonica (Group I: GI) showed episodic regeneration and/or fast height growth;Acer mono, Acer palmatum var.matsumuae andSorbus alnifolia (Group II: GII) showed continuous regeneration and/or slow height growth. The age distribution of stems over 10 cm in d.b.h. suggests synchronous regeneration of GI and GII species. Vertical stratification was promoted during the 12-year period by the difference in annual height growth between the two species groups. Additional tree censuses in both remnant old-growth stands and second-growth stands after large scale blowdowns demonstrated thatQ. mongolica var.grosseserrata is most dominant in stands varying in the stages of development. Disturbance history and successional trends in dominant species implied that stand-devastating disturbances were responsible for the regeneration ofQ. mongolica var.grosseserrata in the study forest.     

Virulence evolution in a virus obeys a trade-off

The evolution of virulence was studied in a virus subjected to alternating episodes of vertical and horizontal transmission. Bacteriophage f1 was used as the parasite because it establishes a debilitating but non-fatal infection that can be transmitted vertically (from a host to its progeny) as well as horizontally (infection of new hosts). Horizontal transmission was required of all phage at specific intervals, but was prevented otherwise. Each episode of horizontal transmission was followed by an interval of obligate vertical transmission, followed by an interval of obligate horizontal transmission etc. The duration of vertical transmission was eight times longer per episode in one treatment than in the other, thus varying the relative intensity of selection against virulence while maintaining selection for some level of virus production. Viral lines with the higher enforced rate of infectious transmission evolved higher virulence and higher rates of virus production. These results support the trade-off model for the evolution of virulence.