Distribution of Carboxylates and Acid Phosphatase and Depletion of Different Phosphorus Fractions in the Rhizosphere of a Cereal and Three Grain Legumes

This study investigates the distribution of carboxylates and acid phosphatases as well as the depletion of different phosphorus (P) fractions in the rhizosphere of three legume crop species and a cereal, grown in a soil with two different levels of residual P. White lupin (Lupinus albus L.), field pea (Pisum sativum L.), faba bean (Vicia faba L.) and spring wheat (Triticum aestivum L.) were grown in small sand-filled PVC tubes to create a dense root mat against a 38-μm mesh nylon cloth at the bottom, where it was in contact with the soil of interest contained in another tube. The soil had either not been fertilised (P0) or fertilised with 15 (P15) kg P ha⁻¹ in previous years. The mesh size did not allow roots to grow into the soil, but penetration of root hairs and diffusion of nutrients and root exudates was possible, and a rhizosphere was established. At harvest, thin (1 mm) slices of this rhizosphere soil were cut, down to a 10-mm distance from the mesh surface. The rhizosphere of white lupin, particularly in the P0 treatment, contained citrate, mostly in the first 3 mm, with concentrations decreasing with distance from the root. Acid phosphatase activity was enhanced in the rhizosphere of all species, as compared with bulk soil, up to a distance of 4 mm. Phosphatase activity was highest in the rhizosphere of white lupin, followed by faba bean, field pea and wheat. Both citrate concentrations and phosphatase activities were higher in P0 compared with P15. The depletion of both inorganic (P_i) and organic (P_o) phosphorus fractions was greatest at the root surface, and decreased gradually with distance from the root. The soil P fractions that were most depleted as a result of root activity were the bicarbonate-extractable (0.5 M) and sodium hydroxide-extractable (0.1 M) pools, irrespective of plant species. This study suggests that differences among the studied species in use of different P pools and in the width of the rhizosphere are relatively small.     

Belowground responses of <Emphasis Type="Italic">Picea asperata</Emphasis> seedlings to warming and nitrogen fertilization in the eastern Tibetan Plateau

The impacts of global climatic change on belowground ecological processes of terrestrial ecosystems are still not clear. We therefore conducted an experiment in the subalpine coniferous forest ecosystem of the eastern edges of the Tibetan Plateau to study roots of Picea asperata seedlings and rhizosphere soil responses to soil warming and nitrogen availability from April 2007 to December 2008. The seedlings were subjected to two levels of temperature (ambient; infrared heater warming) and two nitrogen levels (0 or 25 g m⁻²year⁻¹ N). We used a free air temperature increase from an overhead infrared heater to raise both air and soil temperature by 2.1 and 2.6°C, respectively. The results showed that warming alone significantly increased total biomass, coarse root biomass and fine root biomass of P. asperata seedlings. Both total biomass and fine root biomass were increased, but coarse root biomass was significantly decreased by nitrogen fertilization and warming combined with nitrogen fertilization. Warming induced a prominent increase in soil organic carbon (SOC) and NO₃ ⁻-N of rhizosphere soil, while nitrogen fertilization significantly decreased SOC and NH₄ ⁺-N of rhizosphere soil. The warming, fertilization and warming × N fertilization interaction decreased soil microbial C significantly, but substantially increased soil microbial N. These results suggest that nitrogen deposition combined with warmer temperatures under future climatic change possibly will have no effect on fine root production of P. asperata seedlings, but could enhance the nitrification process of their rhizosphere soils in subalpine coniferous forests.     

Changes in the extractability of cations (Ca,Mg and K) in the rhizosphere soil of Norway spruce (Picea abies) roots

Nutrient concentrations in the rhizosphere soil can be higher, lower or remain unchanged compared to the bulk soil, but relatively little is known about such changes for basic cations in the rhizosphere of tree roots. A modified root container technique of studying rhizosphere processes was employed. Plexiglas cylinders were horizontally split by a membrane with 30 M mesh size into an upper compartment for root growth and a root-free lower compartment, each with an inner diameter of 5 cm and a height of 10 cm. One 2-year-old Norway spruce (Picea abies) seedling was transplanted from a nursery into each cylinder. Plants were not specifically inoculated, but roots were colonised by a mix of ectomycorrhizal fungi originating from the nursery. The nutrient poor mineral soil used in the experiment was taken from a forest site in Bayerischer Wald, southern Germany. The soil was either supplied with a mix of Ca, Mg and K, or not supplied with these cations. Plants were harvested 30 weeks after transplanting. The nylon membrane between the root compartments restricted root growth to the upper compartment, so that by the end of the experiment a root mat was formed at the top side of the membrane. In the lower compartment, soil nearest to the root mat was regarded as rhizosphere soil while soil in a distance from the root mat was regarded as bulk soil. In the upper compartment, rhizosphere soil was obtained at the end of the experiment by gently shaking the roots. The soils were analysed for Ca, Mg and K contents following two different soil extraction methods. In the fertilised treatment, H₂O-extractable Ca and Mg were accumulated in the rhizosphere. In contrast, K (NH₄Cl-extraction) was depleted in the rhizosphere. In the bottom tube, the depletion of K (NH₄Cl-extraction) was restricted to 1 cm distance from the root mat. In unfertilised soil, Ca, Mg and K concentrations did not differ clearly between rhizosphere and bulk soils. The results indicated that the occurrence of cation gradients in the rhizosphere depended on the level of soil nutrient supply. Distinct rhizosphere effects were measured by conventional soil extraction methods only when the soil was freshly fertilised with mineral elements prior to the experiment. In this case, K depletion in the rhizosphere reflected higher K uptake by the fertilised Norway spruce plants. For low-nutrient soils, novel techniques are required to follow subtle changes in the rhizosphere.     

Rhizosphere soil-water collection by immiscible displacement-centrifugation technique

Progress in determining nutrient availability in the rhizosphere is restricted by a lack of reliable and convenient methods for rhizosphere soil-water collection. A modified centrifugation method with a fluorocarbon (Fluorinert,FC-70) as an immiscible displacement liquid was developed. Our objectives were to: i) obtain an adequate soil-water volume from a small rhizosphere sample within a reasonable time; ii) collect rhizosphere soil-water at container capacity ( 90% of field capacity) to determine soluble soil ions; and iii) evaluate FC-70 as an extractant. The soil used was a Beadle clay loam (fine, montmorillonitic mesic Typic Argiustoll) with low and high levels of CaCO₃ (5 and 204g kg^-1). Soil samples from the rhizosphere of 30-days-old sordan (sorghum (Sorghum bicolor L.), sudangrass (Sorghum sudanese L.) hybrid seedlings were thin-sectioned at 1-, 2- and 3-mm from the root surface. The extraction parameters (sample size, volume of extractant, relative centrifugal force and centrifugation time) were varied to determine optimal values. We obtained adequate amounts of aqueous solutions from moist soil ( 6 g) when mixed with 2 mL of FC-70, packed into a filter unit, and centrifuged for 1 hour at 14,500 × g. The displaced soil-water was analyzed by inductively coupled plasma spectrometry. The modified centrifugation technique with FC-70 offers a reliable, rapid, safe, and contamination-free method for obtaining unaltered soil-water from the rhizosphere, at a moisture content normally found in soil.     

西南喀斯特石漠化环境适生植物细根构型及其与细根和根际土壤养分计量特征的相关性

以西南喀斯特石漠化环境适生植物构树(Broussonetia papyrifera)、花椒(Zanthoxylum bungeanum)、刺梨(Rosa roxburghii)、火棘(Pyracantha fortuneana)为研究对象,采用挖掘法采集完整的细根根系,分析细根构型特征及其与细根和根际土壤C、N、P养分元素化学计量特征之间的相关性,探讨细根构型特征对石漠化贫瘠土壤生境的响应。结果表明:构树、花椒、刺梨、火棘细根构型均趋向于鱼尾形分支模式,细根拓扑指数分别为0.93、0.95、0.95和0.94。4种适生植物的细根连接长度较长,但细根根系分支率较小。构树、刺梨细根分支前后横截面积比不存在显著差异且分别为1.04、1.03,基本符合Leonardo da Vinci法则。细根构型与细根和根际土壤养分有一定的相关性。主成分分析结果表明,细根N含量及细根、根际土壤中与P相关的计量比均是影响细根构型的主要因子。进一步分析表明,4种适生植物通过减少细根次级分支、根系间的重叠、延长细根连接长度以获得充足的养分来应对环境的变化,提高对养分的吸收效率以及对喀斯特环境的生态适应性。研究结果...     

Nutrient composition of Douglas-fir rhizosphere and bulk soil solutions

Rhizosphere soil solution is the direct source of nutrients for plant uptake. The nutrient composition of rhizosphere soil solution can be very different from that of bulk soil solution due to root exudation, nutrient uptake and rhizosphere microorganism activity. This study examined the nutrient composition of Douglas-fir rhizosphere soil solution in two soils belonging to the Nisqually and Pitcher soil series and compared rhizosphere solution with that of bulk soil solution. Fertilized and unfertilized Nisqually soils were also compared. Soil solutions were collected using centrifugation. Results indicated that nutrient concentrations in the rhizosphere solutions were typically higher than that of bulk soil solutions when no fertilizer was applied. Differences in the concentrations of nutrients between the rhizosphere and bulk soil solutions were masked by the addition of fertilizers. Rhizosphere solution pH also appeared to be affected by the concentration of NH₄ and NO₃ in the solution. With a higher concentration of NH₄ relative to NO₃ in the rhizosphere soil solution, the solution pH of the rhizosphere was lower than that of the bulk soil, but with a lower concentration of NH₄ relative to NO₃, the solution pH of the rhizosphere was higher than that of the bulk soil solution.     

Actinomycetales bacteria from a spruce stand: Characterization and effects on growth of root symbiotic and plant parasitic soil fungi in dual culture

The rhizosphere, the narrow zone of soil around living roots, is characterized by root exudates which attract soil microorganisms. Most importantly, certain soil fungi establish symbiotic interactions with fine roots which enhance nutrient availability for the plant partner (mycorrhiza). The establishment of such a symbiosis can be affected by soil bacteria. In this study we isolated Gram-positive soil bacteria from the rhizosphere of a spruce stand rich with fly agaric (Amanita muscaria) fruiting bodies. Using a coculture technique in Petri dishes, bacterial isolates were characterized by their effect on the growth of fungal hyphae. A group of bacterial strains were identified which significantly promoted growth of fly agaric hyphae. One of these strains was shown to additionally inhibit growth of pathogenic fungi such as Armillaria obscura (wide host range) and Heterobasidion annosum (causes wood decay in conifers). Taxonomic characterization of the effective bacterial isolates by their morphological appearance, by the analysis of diaminopimelic acid, cell wall sugars, and DNA sequencing (16S rDNA) identified them as actinomycetes, some of which are not yet contained in data banks.     

茅尾海红树根际土壤可培养细菌多样性及抑菌活性研究

为挖掘茅尾海红树植物根际土壤可培养细菌资源,研究其抑菌活性,该文使用培养基对茅尾海5种红树植物(红海榄、黄槿、无瓣海桑、桐花树、阔苞菊)的7份根际土壤进行富集培养,选用6种不同分离培养基对富集样品进行可培养细菌的分离纯化,基于菌株16S rRNA基因序列信息进行物种多样性分析,并采用纸片法筛选具有抑制表皮葡萄球菌、耐甲氧西林金黄色葡萄球菌、铜绿假单胞菌活性的菌株。结果表明:(1)从7份红树植物根际土壤样品中分离到120种可培养细菌,隶属于35科47属,其中链霉菌属(Streptomyces sp.)占菌种总数的 14.2%,同时发现5种潜在新菌株。(2)通过抑菌活性初筛,发现9种细菌的发酵粗提物对至少一种致病菌具有抑菌活性。综上表明,茅尾海红树植物根际土壤可培养细菌多样性丰富,并且部分菌株具有抑制人类致病菌活性。该研究结果为新型抗生素的开发与利用提供了菌种资源。     

Depletion of Selenium in Soil Solution due to its Enhanced Sorption in the Rhizosphere of Soybean

The effect of plant roots on selenium (Se) mobility in soil was studied by a large-scale pot experiment in order to understand the environmental behavior of Se in agricultural soils under plant growth conditions. Soybean plants (Glycine max (L.) Merrill) were grown in a greenhouse for 84 d. The concentrations of Se and major elements (K, Ca, Mg, Na, and Al) in the soil solutions and in the plants were measured at different growth periods. Concentrations of Se and major cations in soil solution decreased as the soybean plants grew, while the concentrations of Al increased. It was assumed that the soybean roots released H⁺ with the uptake of cations; consequently, due to the acidification of the rhizosphere, Al³⁺ was released starting from the soil solid phase. The decreased Se concentration in the soil solution should be due to the enhancement of Se sorption onto the soil solid phase. The increase of Se sorption level in the rhizosphere was examined in a small-scale pot experiment. The soil–soil solution distribution coefficient of Se (K _d-Se) was observed as an index of Se sorption level. K _d-Se clearly increased in the rhizosphere soil after cultivation. The effects of pH and Al³⁺ in the rhizosphere on Se sorption were assessed by K _d-Se measurements at different levels of HCl and AlCl₃. In this third experiment, a decrease in pH increased K _d-Se values, but no specific effect was observed on Se sorption due to increased Al³⁺. These results show that the Se mobility in agricultural soil could be decreased by plant roots under plant growth conditions due to enhanced Se sorption in the rhizosphere.     

小蓬竹根际土壤微生物及内生真菌多样性分析

为了解喀斯特典型物种-小蓬竹根际土壤微生物及不同部位内生真菌多样性,采用沿等高线等距离取样法采集小蓬竹根际土壤及健康植株,通过可培养对根际土微生物及内生菌进行分离,利用分子技术对其进行鉴定,根据鉴定结果构建系统发育树,并计算小蓬竹根际土壤微生物和根茎叶内生真菌多样性。结果如下：（1）共从根际土壤、根、茎、叶分离得到139个真菌菌株,隶属于27属,其中根际土壤分离得到34个真菌菌株隶属于12属,根部分离得到的63个内生真菌菌株隶属于17个属,茎部分离得到的14个内生真菌菌株隶属于8个属,叶部分离得到28个内生真菌菌株隶属于9个属;（2）根际土壤共分离得到41株细菌菌株,隶属于7个属26个种,20株放线菌菌株,隶属于1属15种;从Shannon-Wiener多样性指数、均匀度指数、Simpson指数排序来看,真菌主要表现为根 > 根际土壤 > 茎 > 叶,细菌和放线菌多样性均较低。（3）按层次聚类分析可分别将真菌、细菌、放线菌聚为3支。小蓬竹根际土壤、根、茎和叶具有丰富的微生物多样性,不同部位菌群组成存在差异性（P<0.05）,且存在以假单胞菌属、芽孢杆菌属等为优势属的抗盐耐旱菌群,这有助于揭示小蓬竹对喀斯特生境的适应性,以及为微生物-植物群落之间相互关系提供一定基础数据,为后期寻找小蓬竹相关耐性功能菌奠定基础。     

Upscaling from Rhizosphere to Whole Root System: Modelling the Effects of Phospholipid Surfactants on Water and Nutrient Uptake

While the rhizosphere presents a different chemical, physical and biological environment to bulk soil, most experimental and modelling investigations of plant growth and productivity are based on bulk soil parameters. In this study, water and nutrient acquisition by wheat (Triticum aestivum L.) roots was investigated using rhizosphere- and root-system-scale modelling. The physical and chemical properties of rhizosphere soil could be influenced by phospholipid surfactants in the root mucilage. Two models were compared: a 2-dimensional (2D) Finite Element Method rhizosphere model, and a 3-dimensional (3D) root architecture model, ROOTMAP. ROOTMAP was parameterised to reproduce the results of the detailed 2D model, and was modified to include a rhizosphere soil volume. Lecithin (a phospholipid surfactant) could be exuded into the rhizosphere soil volume, decreasing soil water content and hydraulic conductivity at any given soil water potential, and decreasing phosphate adsorption to soil particles. The rhizosphere-scale modelling (5 × 5 mm² soil area, 10 mm root length, uptake over 12 h) predicted a reduction in water uptake (up to 16% at 30 kPa) and an increase in phosphate uptake (up to 4%) with lecithin exudation into the rhizosphere, but little effect on nitrate uptake, with only a small reduction in dry soil (1.6% at 200 kPa). The 3D root model reproduced the water (y = 1.013x, R² = 0.996), nitrate (y = 1x, R² = 1) and phosphate (y = 0.978x, R² = 0.998) uptake predictions of the rhizosphere model, providing confidence that a whole root system model could reproduce the dynamics simulated by a Finite Element Method rhizosphere model. The 3D root architecture model was then used to scale-up the rhizosphere dynamics, simulating the effect of lecithin exudation on water, nitrate and phosphate acquisition by a wheat root system, growing over 41 d. When applied to growing and responsive roots, lecithin exudation increased P acquisition by up to 13% in nutrient-rich, and 49% in relatively nutrient-poor soil. A comparison of wheat (Triticum aestivum L.) and lupin (Lupinus angustifolius L.) root architectures, suggested an interaction between the P acquisition benefit of rhizosphere lecithin and root architecture, with the more highly-branched wheat root structure acquiring relatively more P in the presence of lecithin than the sparsely-branched lupin root system.     

Plant induced alteration in the rhizosphere and the utilisation of soil heterogeneity

Plant-soil interactions result in a special rhizosphere soil chemistry, differing from that of the bulk soil found only a few mm from the root. The aim of this study was to investigate adaptation mechanisms of herbs growing in acid soils through studying their rhizosphere chemistry in a greenhouse experiment and in a field study. Ten herbs were grown in acid soil (pH 4.2 in the soil solution) in the greenhouse. The concentrations of NO₃ ^-, SO₄ ^2-, phosphates, Ca²⁺, Mg²⁺, Mn²⁺, K⁺, Na⁺, NH₄ ⁺ and pH were analysed in soil solutions obtained by centrifugation. The general pattern found was a depletion of nutrients in the rhizosphere compared with their concentrations in the bulk soil. The pH increase (up to 0.7 units) in the rhizosphere soil appeared to be caused by plant uptake of NO₃ ^- (r²=0.88). The ion concentrations in the soil solution of the rhizosphere were dependent on plant species and biomass increase. Although species with a larger biomass and higher growth rates showed a higher degree of ion depletion (except for Na⁺, SO₄ ^2-) in the rhizosphere, there were also species specific responses. A field study of five herbs at five oak forest sites in Southern Sweden (Scania) was also carried out. In addition to the soil solution concentrations, the loss on ignition (LOI) and the concentrations of 0.1 M BaCl₂ extractable K⁺, Mg²⁺, Mn²⁺, Ca²⁺, and Al ions were measured. The amount of soil solution Al was determined as free ionic (quickly reacting) Al. For all species and sites, the LOI and the concentrations of exchangeable cations were higher in the rhizosphere than in the bulk soil, apparently due to the roots preferably growing at organic-rich microsites. The concentrations of the ions as measured in the centrifuged soil solution, were either higher in the rhizosphere than in the bulk soil or were the same in both, except for NO₃ ^- and quickly reacting Al. The lower concentrations of quickly reacting Al in the rhizosphere, compared with the bulk soil could indicate the uptake of Al by the plant or the exudation of complexing substances. The pH differences were only small and mostly non-significant. Plant-soil interactions and the ability of plants to utilise heterogeneity of the soil appear to be more important for plant growth in acid soils than recognised heretofore. Rhizosphere studies provide an important means of understanding plant strategies in acid soils. This revised version was published online in June 2006 with corrections to the Cover Date.     

Rhizosphere microbial community and hexachlorocyclohexane degradative potential in contrasting plant species

The organochlorine 1,2,3,4,5,6 hexachlorocyclohexane (HCH) is a broad-spectrum insecticide that was used on a large-scale worldwide. The soil–plant–microbe system and its influence on HCH biodegradation are evaluated. A greenhouse experiment was designed to evaluate HCH dissipation and several microbial parameters among rhizosphere and bulk soil of two contrasting plants, Cytisus striatus (Hill) Rothm and Holcus lanatus L. Plants were grown for 180 days in three treatments: uncontaminated soil (control), uncontaminated soil inoculated with soil (3% w/w) from a HCH-contaminated site (INOC), and uncontaminated soil inoculated with soil (3% w/w) from the HCH-contaminated site and artificially contaminated to obtain 100 mg HCH kg⁻¹ dry soil (100HCH-INOC). At harvest, plant biomass, soil water-extractable organic C, pH and Cl concentration, rhizosphere microbial densities (total heterotrophs, ammonifiers, amylolytics) and C substrate utilization patterns, and degradation of α-, β-, δ- and γ-HCH isomers were determined in bulk and rhizosphere soils. Soil solution Cl concentration was determined every 30 days throughout the entire growth period. Results demonstrate that both Cytisus striatus and Holcus lanatus can grow in soils with up to 100 mg HCH kg⁻¹. An enhanced degradation of α-HCH, but not β- or δ-HCH, was observed in the rhizosphere. Significant changes in the microbial densities were observed between bulk and rhizosphere soils of Cytisus, and an increase in C source utilization indicated changes in community level physiological profiles (CLPP) in the rhizosphere of this species when grown in contaminated soils. HCH dissipation was also greater in soils planted with this species. In accordance, increases in soil extractable C, Cl concentration and acidity were greater at the rhizosphere of Cytisus. Concentration of Cl in soil solutions also indicates greater HCH dechlorination in soils planted with Cytisus than Holcus. Results suggest that phytostimulation of bacteria present or added to soil is a promising approach to cleaning HCH-contaminated sites, and especially for biodegradation of α-HCH.     

Analogous wheat root rhizosphere microbial successions in field and greenhouse trials in the presence of biocontrol agents Paenibacillus peoriae SP9 and Streptomyces fulvissimus FU14

Two Pythium-infested soils were used to compare the wheat root and rhizosphere soil microbial communities from plants grown in the field or in greenhouse trials and their stability in the presence of biocontrol agents. Bacteria showed the highest diversity at early stages of wheat growth in both field and greenhouse trials, while fungal diversity increased later on, at 12 weeks of the crop cycle. The microbial communities were stable in roots and rhizosphere samples across both soil types used in this study. Such stability was also observed irrespective of the cultivation system (field or greenhouse) or addition of biocontrol coatings to wheat seeds to control Pythium disease (in this study soil infected with Pythium sp. clade F was tested). In greenhouse plant roots, Archaeorhizomyces, Debaryomyces, Delftia, and unclassified Pseudeurotiaceae were significantly reduced when compared to plant roots obtained from the field trials. Some operational taxonomic units (OTUs) represented genetic determinants clearly transmitted vertically by seed endophytes (specific OTUs were found in plant roots) and the plant microbiota was enriched over time by OTUs from the rhizosphere soil. This study provided key information regarding the microbial communities associated with wheat roots and rhizosphere soils at different stages of plant growth and the role that Paenibacillus and Streptomyces strains play as biocontrol agents in supporting plant growth in infested soils.     

Relating Hybrid Poplar Fine Root Production,Soil Nutrients,and Hydrocarbon Contamination

Quantifying the effects of hydrocarbon contamination on hybrid poplar fine root dynamics provides information about how well these trees tolerate the adverse conditions imposed by the presence of petroleum in the soil. The objective of this research was to investigate the relationship between the varying concentrations of total petroleum hydrocarbons (TPH) and nutrients across a hydrocarbon-contaminated site, and quantify the effects of these properties on the spatial and temporal patterns of fine root production of hybrid poplar (P. deltoides × P. petrowskyana C. V. Griffin) Twelve minirhizotron tubes were distributed across a TPH-contaminated site at Hendon, SK, Canada, and facilitated quantification of fine root production in areas of varying contamination levels. Residual hydrocarbon contamination was positively correlated with soil total C and N, which may suggest that the hydrocarbons remaining in the soil are associated with organic forms of these nutrients. Fine root production was stimulated by small amounts of hydrocarbon contamination at the field site. Nonlinear regression described fine root production as increasing linearly up to approximately 500 mg kg^{? 1} TPH, then remaining constant as contamination increased. Stimulation of hybrid poplar fine root production in hydrocarbon-contaminated soil could to lead to enhanced contaminant degradation as a result of stimulated microbial activity via a greater rhizosphere effect.     

香蕉假茎生物炭对根际土壤细菌丰度和群落结构的影响

【目的】将香蕉假茎生物炭施加到土壤,探讨香蕉假茎生物炭对香蕉根际土壤微生物的影响。【方法】以香蕉假茎生物炭(BPB)0、1%、2%、3%的质量比与土壤均匀混合。盆栽培养3个月后分离香蕉根际土壤。采用16S rRNA高通量测序技术对根际土壤细菌群落结构和丰度进行表征。【结果】提高BPB施用量可增加土壤有机质、有效钾、有效磷含量,提高土壤pH值,但降低有效氮浓度。在1%BPB样品中获得2278个OTUs,其显示细菌群落中的最大多样性。施加3%的BPB处理土壤,拟杆菌门、疣微菌门和厚壁菌门的相对丰度显著增加;放线菌门、酸杆菌门、芽单胞菌门明显减少。主成分分析发现,1%BPB和2%BPB处理的样本之间土壤细菌群落相似。【结论】施加不同比例BPB改变了根际土壤中细菌丰度和群落结构,且高比例添加改变更加明显。     

艾比湖湿地芦苇根际土壤氨氧化古菌的多样性和群落结构

【目的】旨在揭示耐盐植物芦苇根际与非根际土壤AOA群落结构间的差异,为深入研究盐生植物根际土壤微生物与耐盐性之间的关系提供理论基础。【方法】应用高通量测序技术以氨单加氧酶基因(amoA)为分子标记,对新疆艾比湖湿地荒漠生态系统不同季节(春、夏、秋)芦苇根际与非根际土壤氨氧化古菌(AOA)的多样性和群落结构进行研究。【结果】结果表明,不同季节芦苇根际土壤AOA多样性和丰富度存在差异,相比非根际土壤,夏季和秋季芦苇根际土壤AOA多样性较低丰富度较高,春季多样性较高丰富度较低。芦苇根际土壤中AOA的多样性为春季夏季秋季。AOA群落组成分析表明,土壤样品中AOA群落主要集中在泉古菌门(Crenarchaeota)和奇古菌门(Thaumarchaeota),其中泉古菌门为主要优势菌门。RDA分析表明,含水量(SM)、有机质(SOM)、总氮(TN)和pH是影响芦苇根际土壤AOA群落多样性和丰富度的主要环境因子。【结论】不同季节芦苇根际土壤AOA多样性及丰富度存在差异,相比非根际土壤,芦苇根际土壤AOA更丰富。     

Characterization of Ni-resistant bacteria in the rhizosphere of the hyperaccumulator <Emphasis Type="Italic">Alyssum murale</Emphasis> by 16S rRNA gene sequence analysis

The diversity of 184 isolates from rhizosphere and bulk soil samples taken from the Ni hyperaccumulator Alyssum murale, grown in a Ni-rich serpentine soil, was determined by 16S rRNA gene analysis. Restriction digestion of the 16S rRNA gene was used to identify 44 groups. Representatives of each of these groups were placed within the phyla Proteobacteria, Firmicutes and Actinobacteria by 16S rRNA gene sequence analysis. By combining the 16S rRNA gene restriction data with the gene sequence analysis it was concluded that 44.6% (82/184) of the isolates were placed within the phylum Proteobacteria, among these 35.9% (66/184) were placed within the class α-Proteobacteria, and 20.7% (38/184) had 16S rRNA gene sequences indicative of bacteria within genera that form symbioses with legumes (rhizobia). Of the remaining isolates, 44.6% (82/184) and 5.4% (10/184) were placed within the phyla Actinobacteria and Firmicutes, respectively. No placement was obtained for a small number (10/184) of the isolates. Bacteria of the phyla Proteobacteria and Actinobacteria were the most numerous within the rhizosphere of A. murale and represented 32.1% (59/184) and 42.9% (79/184) of all isolates, respectively. The approach of using 16S rRNA gene sequence analysis in this study has enabled a comprehensive characterization of bacteria that predominate in the rhizosphere of A. murale growing in Ni-contaminated soil.     

根际效应对大豆田土壤线虫群落组成及多样性的影响

根际作为重要的环境界面是植物与环境之间物质能量交换的场所,关于根际效应的研究已成为土壤生态学的新兴热点领域,然而有关大豆根际效应对土壤动物多样性影响的研究报道并不多见。在三江平原选择连续耕作15a的大豆田,对大豆根际区与非根际区土壤线虫群落结构组成进行了对比分析。结果表明:大豆根际区土壤线虫总数、辛普森多样性指数(Dom)显著高于非根际区,根际区的物种数(S)、物种丰富度指数(SR)显著低于非根际区。说明大豆根际效应增加土壤线虫的丰度,但降低了线虫群落结构的复杂性。大豆根际区植物寄生线虫(PP)、食真菌线虫(FF)和食细菌线虫(BF)数量显著高于非根际区,而PP类群的比例在根际区却显著低于非根际区。这一研究结果表明食微线虫(FF和BF)类群在大豆根际区的比例增加更显著。食真菌与食细菌线虫数量比值(F/B)指示大豆根际区细菌生物量相对高于真菌生物量。研究结果丰富了农田土壤线虫多样性的研究内容,并为我国东北大豆田线虫病害的防治及定制相应的农业管理措施提供参考。     

氮沉降对杉木和枫香土壤氮磷转化及碳矿化的影响

氮沉降是全球变化的重大环境问题,根际是地下生态过程研究的前沿,但目前氮沉降对亚热带地区不同树种土壤氮、磷供应和碳矿化根际过程的影响及其机制尚不清楚。选取典型红壤区15a针叶树杉木(Cunninghamia lanceolata)和阔叶树枫香(Liquidamba formosana)为对象,野外原位开展10 g N m~(-2)a~(-1)氮沉降试验3a,于2014年8月收集杉木和枫香根际土壤和非根际土壤,测定其p H值、有效氮、速效磷、水溶性有机碳及其34 d有机碳矿化动态,并计算根际效应。结果表明:氮沉降显著降低两个树种土壤p H值和杉木根际土壤速效磷(P0.05);提高枫香非根际土壤NO~-_3-N和杉木非根际土壤水溶性有机碳含量。同时,氮沉降显著提高杉木土壤有机碳矿化速率,根际和非根际的增幅分别为71.2%和41.2%,降低枫香土壤有机碳矿化速率,根际和非根际的降幅分别为10.6%和44.1%。此外,氮沉降显著降低枫香土壤NO~-_3-N和有机碳前期矿化速率的根际效应,增强后期矿化速率的根际效应,而杉木对氮沉降响应不显著。可见,氮沉降可显著改变树木土壤养分供应和有机碳稳定性,且丘陵红壤区针叶树和阔叶树根际过程对氮沉降的响应模式有别。率先报道了亚热带不同树种根际碳、氮、磷耦合过程对氮沉降的响应格局,并较好地揭示了针叶树和阔叶树对氮沉降响应的分异机制。