PAH Phytoremediation: Rhizodegradation or Rhizoattenuation?

Dealing with soil contaminated with persistent organic pollutants (POP) is an increasing concern amplified by both regulatory constraints and the dramatic impact of human activities on the soil resource. The most used management options are treatments which totally eradicate the toxic compounds targeted. When possible, environmental-friendly processes should be used, and recent years have seen the emergence of green technologies using biological energies involving microorganisms (bioremediation) and plants (phytoremediation). Research has focused on phytoremediation and many have presented this technology as the process ideally combining efficiency, low cost and environmental acceptance. However, the applicability of phytoremediation on soils contaminated by bio-recalcitrant organic compounds, such as polycyclic aromatic hydrocarbons (PAH), has not yet proved as successful as expected. We propose here a review and discussion of the overall question of PAH status in soil and their potential for treatment. The limits and applicability of bioremediation technologies are discussed, and the specific beneficial effect of plants is objectively evaluated with a special interest to processes which lead to rhizoattenuation. Given the PAH high affinity to soil organic matter, availability is the main limitation to phytoremediation. In this context, bioavailability quantification remains an issue as well as the characterization of the recalcitrant fraction.     

PAH基因内一个A／C多态性位点的分析

在苯丙氨酸羟化酶基因ＩＶＳ３的３‘端－１１位有一个Ａ／Ｃ多态性位点,应用ＳＳＣＰ分析可进行简便检测,Ａ等位基因的频率为０．６５６,Ｃ等位基因的频率为０．３４４,此位点的多态性信息含量（ＰＩＣ）为０．３５１。Ａ／Ｃ位点与同一内含子内的ＳＴＲ位点间没有连锁不平衡性,联合应用这两个多态性位点进行单体型连锁分析,对ＰＫＵ家系进行产前基断诊断率可达７５％。     

苯丙氨酸羟化酶（PAH）基因外显子7及其两侧内含子的突变研究

为探讨中国苯丙酮尿症（PKU）人群中苯丙氨酸羟化酶（PAH）基因外显子7的突变特征,对147例PKU患儿的294个PAH基因外显子7以及两侧部分内含子序列,应用PCR－单链构象多态性（SSCP）分析及基因序列分析的方法进行了筛查和确定。共发现13种突变基因：G239D、R241C、R241fs、R243Q、G247S、G247V、R252Q、L255S、R261Q、M276K、E280G、P281L、Ivs7+2T>A,其中7 种突变基因在中国PKU人群首次发现：G239D 、R241fs 、G247S 、E280G、L255S、R261Q、P281L,前4种在国际上尚未见到报道,并已提交到国际PAH突变数据库（www.pahdb.mcgill.ca）。突变基因的总频率为30.61%（90 /294）。突变涉及了错义、缺失、移码和剪接位点4种突变类型。结果明确了PAH基因外显子7的突变种类和分布等特征,表明外显子7是中国人PAH基因突变的热点区域。 Abstract: To study mutation in exon 7 of the gene for the phenylalanine hydroxylase（PAH）, the mutations in exon 7 and flanking sequence of PAH gene were detected by means of SSCP analysis and DNA sequencing, in 147 unrelated Chinese children with phynelketonuria and their parents. Thirteen different mutations, including 11 missense, 1 deletion and 1 splice mutation, were revealed in 90/294 mutant alleles (30.61%). The prevalent mutations were R243Q (22.8%) and Ivs7nt2t->a (2.38%). Seven novel mutations were identified: G239D, R241fsdelG, G247S, E280G, L255S, R261Q, P281L. These new mutations have not been described in Chinese PKU population and the first 4 mutants have not been reported and thus been submitted to www.pahdb,mcgill.ca. The missense was the most common type. The deletion and frameshift mutations were detected for the first time in Chinese PKU population. This study showed the mutation characteristics and their distribution in exon 7 of PAH gene and proved that the exon 7 was the hot region of PAH gene mutation in Chinese PKU population .     

PVT1促进PAH大鼠肺动脉平滑肌细胞增殖和迁移的作用机制研究

摘要 目的：研究浆细胞瘤多样异位基因1（PVT1）在肺动脉高压（PAH）大鼠中对于肺动脉平滑肌细胞(PASMCs)增殖和迁移的作用及其可能的机制。方法：将16只成年雄性SD大鼠随机分为肺动脉高压组（PAH组）和对照组,每组8只大鼠。PAH组大鼠通过单次项背部皮下注射MCT溶液造模,对照组大鼠给予单次项背部皮下注射等量生理盐水。通过胸右心室穿刺法测量右心室压力。取各组大鼠肺组织,并进行原代肺动脉平滑肌细胞分离培养。通过RT-qPCR和Western blot检测PVT1及Fxr1在PAH组织及PASMCs中的表达水平;通过HE染色评估PAH组织的血管壁形态;免疫荧光法检测HPASMC的纯度;CCK-8法和伤口愈合迁移实验检测PASMCs增殖和迁移情况。结果：与对照组相比,PAH组大鼠肺组织血管壁厚度偏厚、肺动脉压显著升高（P<0.05）。PVT1在PAH组大鼠的PAH组织和PASMCs中的表达水平显著上调（P<0.05）,且其表达与肺动脉压呈正相关。与对照组相比,转染sh-PVT1的PASMCs显示出较低的细胞活力,同时转染sh-PVT1有效敲低了PASMCs中PVT1的表达水平（P<0.01）。与对照组相比,PVT1的敲低抑制了PASMCs迁移能力（P<0.01）。在转染pcDNA-PVT1的PASMCs中发现较高的增殖能力,PVT1的过表达促进了PASMCs迁移能力（P<0.01）。与对照组相比,Fxr1在PAH模型组的PAH组织和PASMCs中的表达水平显著上调（P<0.01）。结论：PVT1通过调节Fxr1的表达促进PASMCs的增殖和迁移,PVT1可能是PAH诊断和预测指标。     

PAH 399 GTA(Val)→GTT(Val), a new silent mutation found in the Chinese

Summary A silent mutation or sequence polymorphism, an A to T substitution at codon 399 in exon 11 of the phenylalanine hydroxylase (PAH) gene has been identified by DNA sequence analysis in the Chinese. The frequencies of this new mutation in normal and abnormal (phenylketonuria; PKU) genes are 0.005 and 0.09, respectively, based on the analyses of 100 apparently normal individuals and 39 PKU patients, as demonstrated by DNA amplification with polymerase chain reaction (PCR) and oligonucleotide hybridization methods. The results suggest that there is linkage disequilibrium between this polymorphism and PKU mutations in the PAH gene; approximately 10% of defect PAH alleles in the Chinese population may be identified with this sequence polymorphic marker.     

Mutagenicity and DNA adduct formation of PAH, nitro-PAH, and oxy-PAH fractions of atmospheric particulate matter from São Paulo, Brazil

Urban particulate matter (UPM) contributes to lung cancer incidence. Here, we have studied the mutagenic activity and DNA adduct-forming ability of fractionated UPM extractable organic matter (EOM). UPM was collected with a high-volume sampler in June 2004 at two sites, one at street level adjacent to a roadway and the other inside a park within the urban area of the city of S?o Paulo, Brazil. UPM was extracted using dichloromethane, and the resulting EOM was separated by HPLC to obtain PAH, nitro-PAH, and oxy-PAH fractions which were tested for mutagenicity with the Salmonella strains TA98 and YG1041 with and without S9 metabolic activation. The PAH fraction from both sites showed negligible mutagenic activity in both strains. The highest mutagenic activity was found for the nitro-PAH fraction using YG1041 without metabolic activation; however, results were comparable for both sites. The nitro-PAH and oxy-PAH fractions were incubated with calf thymus DNA under reductive conditions appropriate for the activation of nitro aromatic compounds, then DNA adduct patterns and levels were determined with thin-layer chromatography (TLC) 32P-postlabeling method using two enrichment procedures-nuclease P1 digestion and butanol extraction. Reductively activated fractions from both sites produced diagonal radioactive zones (DRZ) of putative aromatic DNA adducts on thin layer plates with both enrichment procedures. No such DRZ were observed in control experiments using fractions from unexposed filters or from incubations without activating system. Total adduct levels produced by the nitro-PAH fractions were similar for both sites ranging from 30 to 45 adducts per 10(8) normal nucleotides. In contrast, the DNA binding of reductively activated oxy-PAH fractions was three times higher and the adduct pattern consisted of multiple discrete spots along the diagonal line on the thin layer plates. However, DNA adduct levels were not significantly different between the sampling sites. Both samples presented the same levels of mutagenic activity. The response in the Salmonella assay was typical of nitroaromatics. Although, more mutagenic activity was related to the nitro-PAH fraction in the Salmonella assay, the oxy-PAH fractions showed the highest DNA adduct levels. More studies are needed to elucidate the nature of the genotoxicants occurring in S?o Paulo atmospheric samples.     

法舒地尔联合舒利迭对COPD合并PAH患者肺功能及血清BNP、CRP、IL-8、TNF-α水平的影响

目的:探讨法舒地尔联合舒利迭对慢性阻塞性肺疾病(COPD)合并肺动脉高压(PAH)患者的肺功能及血清脑钠肽(BNP)、C反应蛋白(CRP)、白介素-8(IL-8)、肿瘤坏死因子-α(TNF-α)水平的影响。方法:选择我院2015年2月~2017年1月收治的108例COPD合并PAH患者作为研究对象,根据患者入院顺序编号,采取随机数字表分成观察组(n=54)与对照组(n=54)。两组均给予常规治疗,观察组在常规治疗基础上联合给予法舒地尔与舒利迭治疗,对两组患者进行疗效评估,比较两组患者治疗前后的肺功能、血气分析指标以及血清BNP、CRP、IL-8、TNF-α水平的变化。结果:治疗后,两组患者的FEV1%pre、FEV1/FVC、PaO_2均较治疗前显著升高(P0.05),且观察组FEV1%pre、FEV1/FVC、PaO_2明显高于对照组(P0.05);两组患者的PaCO_2、SPAP、Tei指数、血清BNP、CRP、IL-8、TNF-α水平均较治疗前显著下降(P0.05),且观察组PaCO_2、SPAP、Tei指数、血清BNP、CRP、IL-8、TNF-α水平均明显低于对照组(P0.05)。结论:法舒地尔联合舒利迭治疗COPD合并PAH能有效改善患者的肺功能,减轻炎症反应,降低肺动脉压,疗效确切。     

Coupling of Na<Superscript>+</Superscript>/α-ketoglutarate symport and PAH/α-ketoglutarate antiport in epithelial cells. Estimation of probability of the anion exchanger spontaneous re-orientation

In this work, dynamics was studied of uptake of p-aminohippurate by basolateral membrane vesicles isolated from rat kidney proximal tubules. The uphill PAH transport into the basolateral membrane vesicles was shown to occur in the presence of α-ketoglutarate and Na⁺-gradient. Based on mathematical model of symport and antiport cooperation, the mechanism of energy coupling of PAH transport via exchanger with Na⁺-dicarboxylate symport is discussed. Based on comparison of our own and literature data, the data analysis shows adequacy of the proposed mathematical model to describe the symport and antiport cooperation. This model has been shown to enable estimation of re-orientation probability of the empty anion exchanger (without substrate) from one membrane side to the other.