Karyomorphological studies in some parasitic species of the Scrophulariaceae,I

A karyomorphological comparison of four genera of the tribe Buchnereae and two genera of the tribe Euphrasieae, root parasites of the subfamily Rhinanthoideae of the Scrophulariaceae, is presented along with 12 new chromosome counts. The interphase nuclei are of the simple chromocenter type. Macranthera and Aureolaria have more subtelocentric chromosomes than those of the other genera studied, which indicates higher asymmetric variation in their karyotypes. In all the karyotypes decrease in size from the longest to the shortest chromosomes is gradual. All the species studied show karyotypic heteromorphology and heteromorphic homologous chromosomes.     

Sex chromosome evolution in frogs—helpful insights from chromosome painting in the genus Engystomops

The differentiation of sex chromosomes is thought to be interrupted by relatively frequent sex chromosome turnover and/or occasional recombination between sex chromosomes (fountain-of-youth model) in some vertebrate groups as fishes, amphibians, and lizards. As a result, we observe the prevalence of homomorphic sex chromosomes in these groups. Here, we provide evidence for the loss of sex chromosome heteromorphism in the Amazonian frogs of the genus Engystomops, which harbors an intriguing history of sex chromosome evolution. In this species complex composed of two named species, two confirmed unnamed species, and up to three unconfirmed species, highly divergent karyotypes are present, and heteromorphic X and Y chromosomes were previously found in two species. We describe the karyotype of a lineage estimated to be the sister of all remaining Amazonian Engystomops (named Engystomops sp.) and perform chromosome painting techniques using one probe for the Y chromosome and one probe for the non-centromeric heterochromatic bands of the X chromosome of E. freibergi to compare three Engystomops karyotypes. The Y probe detected the Y chromosomes of E. freibergi and E. petersi and one homolog of chromosome pair 11 of Engystomops sp., suggesting their common evolutionary origin. The X probe showed no interspecific hybridization, revealing that X chromosome heterochromatin is strongly divergent among the studied species. In the light of the phylogenetic relationships, our data suggest that sex chromosome heteromorphism may have occurred early in the evolution of the Amazonian Engystomops and have been lost in two unnamed but confirmed candidate species.Subject terms: Cytogenetics, Evolutionary genetics     

Karyotype, sex determination, and meiotic chromosome behavior in two pholcid (Araneomorphae, Pholcidae) spiders: implications for karyotype evolution

There are 1,111 species of pholcid spiders, of which less than 2% have published karyotypes. Our aim in this study was to determine the karyotypes and sex determination mechanisms of two species of pholcids: Physocyclus mexicanus (Banks, 1898) and Holocnemus pluchei (Scopoli, 1763), and to observe sex chromosome behavior during meiosis. We constructed karyotypes for P. mexicanus and H. pluchei using information from both living and fixed cells. We found that P. mexicanus has a chromosome number of 2n = 15 in males and 2n = 16 in females with X0-XX sex determination, like other members of the genus Physocyclus. H. pluchei has a chromosome number of 2n = 28 in males and 2n = 28 in females with XY-XX sex determination, which is substantially different from its closest relatives. These data contribute to our knowledge of the evolution of this large and geographically ubiquitous family, and are the first evidence of XY-XX sex determination in pholcids.     

Cytogenetic Analysis of Diploid <Emphasis Type="Italic">Avena</Emphasis> L. Species Containing the As Genome

Cytogenetic examination showed that three diploid oat species containing the As genome are highly similar in karyotype structure and chromosome C-banding patterns. Avena strigosa is more similar to A. wiestii, while A. hirtula is to an extent separated from the two species, differing in the C-banding pattern of chromosome 6. The karyotypes of all three species harbor a small acrocentric chromosome, which is absent from diploid oat species containing other variants of the A genome. The results made it possible to assume genome specificity of the rearrangement resulting in this chromosome.     

Chromosome number of some South American species ofNothofagus (Fagaceae)

The observed chromosome numbers for four deciduous species of South AmericanNothofagus (Sect.Nothofagus) are 2n=26. This chromosome count is the first report on the South American species of the genus, and is the same number as reported for the New Zealand counterparts of the evergreen sectionCalusparassus. Furthermore, a significant difference between the karyotypes of two subsections within the Sect.Nothofagus has been recognized.     

Chromosomes of Asian cyprinid fishes: Variable karyotype patterns and evolutionary trends in the genus Osteochilus (Cyprinidae, Labeoninae, “Osteochilini”)

The Cyprinidae family is a highly diversified but demonstrably monophyletic lineage of cypriniform fishes. Among them, the genus Osteochilus contains 35 recognized valid species distributed from India, throughout Myanmar, Laos, Thailand, Malaysia, Indonesian archipelago to southern China. In this study, karyotypes and other chromosomal characteristics of five Osteochilus species occurring in Thailand, namely O. lini, O. melanopleura, O. microcephalus, O. vittatus and O. waandersii were examined using conventional and molecular cytogenetic protocols. Our results showed they possessed diploid chromosome number (2n) invariably 2n = 50, but the ratio of uni- and bi-armed chromosomes was highly variable among their karyotypes, indicating extensive chromosomal rearrangements. Only one chromosome pair bearing 5S rDNA sites occurred in most species, except O. melanopleura, where two sites were detected. In contrast, only one chromosomal pair bearing 18S rDNA sites were observed among their karyotypes, but in different positions. These cytogenetic patterns indicated that the cytogenomic divergence patterns of these Osteochilus species were largely corresponding to the inferred phylogenetic tree. Similarly, different patterns of the distributions of rDNAs and microsatellites across genomes of examined species as well as their different karyotype structures indicated significant evolutionary differentiation of Osteochilus genomes.     

The Diversity of Karyotypes and Genomes within Section Syllinum of the Genus Linum (Linaceae) Revealed by Molecular Cytogenetic Markers and RAPD Analysis

The wide variation in chromosome number found in species of the genus Linum (2n = 16, 18, 20, 26, 28, 30, 32, 36, 42, 72, 84) indicates that chromosomal mutations have played an important role in the speciation of this taxon. To contribute to a better understanding of the genetic diversity and species relationships in this genus, comparative studies of karyotypes and genomes of species within section Syllinum Griseb. (2n = 26, 28) were carried out. Elongated with 9-aminoacridine chromosomes of 10 species of section Syllinum were investigated by C- and DAPI/С-banding, CMA and Ag-NOR-staining, FISH with probes of rDNA and of telomere repeats. RAPD analysis was also performed. All the chromosome pairs in karyotypes of the studied species were identified. Chromosome DAPI/C-banding patterns of 28-chromosomal species were highly similar. Two of the species differed from the others in chromosomal location of rDNA sites. B chromosomes were revealed in all the 28-chromosomal species. Chromosomes of Linum nodiflorum L. (2n = 26) and the 28-chromosomal species were similar in DAPI/C-banding pattern and localization of several rDNA sites, but they differed in chromosomal size and number. The karyotype of L. nodiflorum was characterized by an intercalary site of telomere repeat, one additional 26S rDNA site and also by the absence of B chromosomes. Structural similarities between different chromosome pairs in karyotypes of the studied species were found indicating their tetraploid origin. RAPD analysis did not distinguish the species except L. nodiflorum. The species of section Syllinum probably originated from a common tetraploid ancestor. The 28-chromosomal species were closely related, but L. nodiflorum diverged significantly from the rest of the species probably due to chromosomal rearrangements occurring during evolution.     

Evolutionary rate of the mammalian karyotype

Making pairwise comparisons of karyotypes of species belonging to a genus, we have calculated the probabilities that two randomly chosen species from a genus have the same karyotype. This probability decreases exponentially with time. Thus if we know the divergence time of species from a common ancestor, we can know the rate at which a karyotype changes in unit time. According to our result, mammalian karyotypes appear to be evolving at a rate of one change of either chromosomal number or arm number in every two and half million years. Data indicate that the rate of evolution in chromosome number and arm number are fairly similar in most of mammalian genera. The genus Peromyscus is, however, an exception and exhibits a rather rapid change in the arm number due to heterochromatin changes, but a very slow evolution in the chromosome number.     

Highly Differentiated ZW Sex Microchromosomes in the Australian Varanus Species Evolved through Rapid Amplification of Repetitive Sequences

Transitions between sex determination systems have occurred in many lineages of squamates and it follows that novel sex chromosomes will also have arisen multiple times. The formation of sex chromosomes may be reinforced by inhibition of recombination and the accumulation of repetitive DNA sequences. The karyotypes of monitor lizards are known to be highly conserved yet the sex chromosomes in this family have not been fully investigated. Here, we compare male and female karyotypes of three Australian monitor lizards, Varanus acanthurus, V. gouldii and V. rosenbergi, from two different clades. V. acanthurus belongs to the acanthurus clade and the other two belong to the gouldii clade. We applied C-banding and comparative genomic hybridization to reveal that these species have ZZ/ZW sex micro-chromosomes in which the W chromosome is highly differentiated from the Z chromosome. In combination with previous reports, all six Varanus species in which sex chromosomes have been identified have ZZ/ZW sex chromosomes, spanning several clades on the varanid phylogeny, making it likely that the ZZ/ZW sex chromosome is ancestral for this family. However, repetitive sequences of these ZW chromosome pairs differed among species. In particular, an (AAT)n microsatellite repeat motif mapped by fluorescence in situ hybridization on part of W chromosome in V. acanthurus only, whereas a (CGG)n motif mapped onto the W chromosomes of V. gouldii and V. rosenbergi. Furthermore, the W chromosome probe for V. acanthurus produced hybridization signals only on the centromeric regions of W chromosomes of the other two species. These results suggest that the W chromosome sequences were not conserved between gouldii and acanthurus clades and that these repetitive sequences have been amplified rapidly and independently on the W chromosome of the two clades after their divergence.     

Electrophoretic karyotypes of the elm tree pathogen Ophiostoma ulmi (sensu lato)

Pulsed field gel electrophoresis using OFAGE, TAFE, and CHEF systems has been used to more fully characterize karyotypic variation within the two closely related fungal species of Ophiostoma ulmi sensu lato. Twelve wild-type and laboratory strains, representing the less agressive species O. ulmi and both of the biotypes of the more aggressive species O. novo-ulmi were studied and their karyotypes determined. Depending on the strain, a minimum of four to a minimum of eight chromosomal DNA bands were present that fall into three distinct size classes, with one exception. Strain CESSI6K (O. novo-ulmi, North American aggressive subgroup) contains a unique chromosomal DNA band which comigrated near a Saccharomyces cerevisiae chromosome of 0.95 Mb. This unique band was the smallest O. ulmi s. l. chromosomal DNA observed. Seven of the twelve strains shared a common chromosomal DNA banding pattern, whereas each of the other five had a unique karyotype. There was no correlation between chromosome profile and species, as some O. novo-ulmi and O. ulmi strains shared common electrophoretic karyotypes.     

Chromosomal Diversity and Karyotype Evolution in South American Macaws (Psittaciformes,Psittacidae)

Most species of macaws, which represent the largest species of Neotropical Psittacidae, characterized by their long tails and exuberant colours, are endangered, mainly because of hunting, illegal trade and habitat destruction. Long tailed species seem to represent a monophyletic group within Psittacidae, supported by cytogenetic data. Hence, these species show karyotypes with predominance of biarmed macrochromosomes, in contrast to short tailed species, with a predominance of acro/telocentric macrochromosomes. Because of their similar karyotypes, it has been proposed that inversions and translocations may be the main types of rearrangements occurring during the evolution of this group. However, only one species of macaw, Ara macao, that has had its genome sequenced was analyzed by means of molecular cytogenetics. Hence, in order to verify the rearrangements, we analyzed the karyotype of two species of macaws, Ara chloropterus and Anodorhynchus hyacinthinus, using cross-species chromosome painting with two different sets of probes from chicken and white hawk. Both intra- and interchromosomal rearrangements were observed. Chicken probes revealed the occurrence of fusions, fissions and inversions in both species, while the probes from white hawk determined the correct breakpoints or chromosome segments involved in the rearrangements. Some of these rearrangements were common for both species of macaws (fission of GGA1 and fusions of GGA1p/GGA4q, GGA6/GGA7 and GGA8/GGA9), while the fissions of GGA 2 and 4p were found only in A. chloropterus. These results confirm that despite apparent chromosomal similarity, macaws have very diverse karyotypes, which differ from each other not only by inversions and translocations as postulated before, but also by fissions and fusions.     

Karyological analyses of 33 species of the tribe Ophiopogoneae (Liliaceae) from Southwest China

Chromosome numbers and karyotypes of 26 Ophiopogon species, 2 Liriope species and 5 Peliosanthes species of the family Liliaceae from Southwest China, were investigated. The study revealed a detailed picture of chromosome features and their pattern of karyotype variation in Ophiopogoneae. Karyotype asymmetry in different species and different populations of the same species varied greatly due to different locality conditions. Our analyses may support the separately monophyly of Ophiopogon, Liriope and Peliosanthes.     

The relationship of renanthera storiei and trichoglottis fasciata

The karyotypes of Renanthera storiei and Trichoglottis fasciata and the meiotic behavior in their hybrid were investigated. Considerable differences in chromosome morphology were observed for the two species. The karyotype of R. storiei was more asymmetrical with a lower mean F percentage than that of T. fasciata. Also, variation in the largest pair of chromosomes as well as in the satellite chromosomes was apparent. Meiosis in the hybrid was highly irregular. Observations on karyotypes and meiotic behavior indicate a more distant relationship between Trichoglottis and Renanthera than among Renanthera, Arachnis, and Vandopsis.     

Meiotic drive shapes rates of karyotype evolution in mammals

Chromosome number is perhaps the most basic characteristic of a genome, yet generalizations that can explain the evolution of this trait across large clades have remained elusive. Using karyotype data from over 1000 mammals, we developed and applied a phylogenetic model of chromosome evolution that links chromosome number changes with karyotype morphology. Using our model, we infer that rates of chromosome number evolution are significantly lower in species with karyotypes that consist of either all bibrachial or all monobrachial chromosomes than in species with a mix of both types of morphologies. We suggest that species with homogeneous karyotypes may represent cases where meiotic drive acts to stabilize the karyotype, favoring the chromosome morphologies already present in the genome. In contrast, rapid bouts of chromosome number evolution in taxa with mixed karyotypes may indicate that a switch in the polarity of female meiotic drive favors changes in chromosome number. We do not find any evidence that karyotype morphology affects rates of speciation or extinction. Furthermore, we document that switches in meiotic drive polarity are likely common and have occurred in most major clades of mammals, and that rapid remodeling of karyotypes may be more common than once thought.     

Cytogenetic studies of two land-planarian species from Brazil: Geoplana marginata and Issoca rezendei (Tricladida,Terricola)

The chromosome complement and the C-banded karyotypes of specimens of Geoplana marginata auct. and of Issoca rezendei (Schirch) were investigated. The diploid and fundamental numbers of the two species were identical (2n = 14; FN = 28). Their karyotypes were similar except for the morphology of chromosome pair 6. Their C-banding patterns differed in quantity and localization of the constitutive heterochromatin. The similarity in karyotypes of these species support the hypothesis, proposed earlier on morphological grounds, that the genera Geoplana Stimpson and Issoca Froehlich are closely related. G. marginata and I. rezendei are the first land planarian species of the Neotropical Region to have their karyotypes described.     

Karyotypes of 16 populations of eight species in the genus Polygonatum (Asparagaceae) from China

The karyotypes of 16 populations belonging to eight species of Polygonatum from China were analysed. The chromosome numbers and karyotypes of P. omeiense, P. adnatum and P. hirtellum and the diploidy of P. tessellatum are reported for the first time. The basic chromosome numbers were x = 11, 13, 14 and 15. Based on Stebbins' karyotypic classification, the four karyotypes were recognized as 2B, 3B, 2C and 3C. Considering the arm ratio and individual chromosome size, it was concluded that the possible evolutionary trend of the karyotypes in Polygonatum was from 2B to 3C. The results show that: (1) satellite heterozygosity occurs in many species of this genus; (2) mixoploidy and B chromosomes occur in some species; and (c) karyotypes are different in different species and even in different populations of the same species. © 2009 The Linnean Society of London, Botanical Journal of the Linnean Society, 2009, 159 , 245–254.