Lignocellulose Decomposition and Production of Ligninolytic Enzymes During Interaction of White Rot Fungi with Soil Microorganisms

Abstract Four strains of white rot fungi, including two strains of Pleurotus sp., one Dichomitus squalens, and one Ganoderma applanatum, were grown on milled straw. After colonization of the straw by the fungi, sterile or nonsterile plugs of soil were added to the fungal substrates. The influence of the sterile soil and the indigenous soil microbiota on fungal growth, overall respiration, and production of ligninolytic exoenzymes was assessed. A method for extraction of laccase from soil samples was developed. Lignocellulose decomposition, and enzyme production of D. squalens were enhanced by the presence of sterile soil. The availability of inorganic compounds such as manganese may be a trigger for this stimulation. Neither growth nor the production of laccase and manganese peroxidase (MnP) of the Pleurotus strains was markedly affected by the soil microbiota. These fungi were highly competitive with the soil microbiota. It was demonstrated for the first time that the exoenzymes of such fungi are active in nonsterile soil. Enzyme activity in the aqueous phase of soil was high as in the aqueous phase of the straw substrate. D. squalens and G. applanatum did not withstand the competition with the soil microbiota, but the mycelia associated with straw were overgrown by soil microorganisms. Correspondingly, the fungi did not penetrate the soil, decomposition of lignocellulose was impeded, and the activities of laccase and MnP decreased dramatically. Received: 2 April 1996; Accepted: 7 June 1996     

Production of lignocellulose-degrading enzymes and changes in soil bacterial communities during the growth ofPleurotus ostreatus in soil with different carbon content

The extracellular enzyme activity and changes in soil bacterial community during the growth of the ligninolytic fungus Pleurotus ostreatus were determined in nonsterile soil with low and high available carbon content. In soil with P. ostreatus, the activity of ligninolytic enzymes laccase and Mn-peroxidase was several orders of magnitude higher than in soil without the fungus. Addition of lignocellulose to soil increased the activity of cellulolytic fungi and the production of Mn-peroxidase by P. ostreatus. The counts of heterotrophic bacteria were more significantly affected by the presence of lignocellulose than by P. ostreatus. The effects of both substrate addition and time (succession) were more significant factors affecting the soil bacterial community than the presence of P. ostreatus. Bacterial community structure was affected by fungal colonization in low carbon soil, where a decrease of diversity and changes in substrate utilization profiles were detected.     

Variability of laccase activity in the white-rot basidiomycete Pleurotus ostreatus

The production of laccase in liquid cultures of the white-rot fungusPleurotus ostreatus was highly variable. During the first days of cultivation, the relative variability was as high as 80–100% and it decreased to 30% in the course of cultivation. The main source of variability was assumed to be the independent development of enzyme activity in individual cultures. Cultures with high laccase production showed also high production of the other ligninolytic enzyme—Mn-dependent peroxidase. The variability was probably due to the source of inoculum, deactivation of the enzyme in culture liquid and genetic variations among the cultures. Variability of laccase activities was lower during solid-state fermentation on wheat straw and during the growth in nonsterile soil.     

Biological pretreatment and bioconversion of agricultural wastes,using ligninolytic and cellulolytic fungal consortia

Agricultural wastes have attractive potential as alternate energy sources. However, a major bottleneck is to identify eco-friendly treatment methodologies to utilize them. The large diversity of unexplored, novel, and potential microorganisms hold great promise and require periodic isolation and characterization of microorganisms for bioprospection. In this study, approximately 100 fungal isolates were tested for their lignocellulolytic enzyme activities, based on plate assay, followed by quantification of enzyme activity. From this, M2E (Inonotus tropicalis) and 2a (Cerrena unicolor) showed good growth and proficient ligninolytic activity; isolates GK1 (Chaetomium globosum) and GK2 (Chaetomium brasiliense) exhibited exceptional cellulolytic activity on lignocellulosic substrates such as rice straw and sugarcane bagasse. Consortia of the potential ligninolytic and cellulolytic isolates were set up to determine their ability to biodegrade the lignocellulosic substrates such as rice straw and sugarcane bagasse. The efficiency of the consortia was determined on the basis of the increase in enzyme activity; it was also evident through scanning electron microscopy, x-ray diffraction analysis of the degraded substrates, and the sugar yield. Experiments were also carried out to compare the biological with the physical pretreatment methods. The consortium of ligninolytic and cellulolytic marine-derived fungi developed in this study prove to have the potential for application in the effective utilization of agricultural wastes.     

秸秆降解放线菌GC的筛选及其应用基础研究

运用循环流化技术,从土壤样品中筛选出1株具有单独降解秸秆能力的菌株GC,考察了该菌的生长特性及产纤维素酶和木质素酶能力,验证了该菌对小麦秸秆的处理效果。结果表明,该菌为放线菌的左式链霉菌(Streptomyces drozdowiczii);可在LB等基础培养基中快速繁殖;纤维素内切酶活和滤纸酶活分别可达67.57 U/mL和19.69 U/mL,并且具备木质素降解能力;该菌单独处理小麦秸秆20 d的秸秆失重率为11.52%;处理产物含多种石油烃、有机醇和植物甾醇等,表明该菌在秸秆等农业面源污染物的资源化利用方面具有良好的开发应用前景。     

Preparation and crossing of basidiospore-derived monokaryons –- a useful tool for obtaining laccase and other ligninolytic enzyme higher-producing dikaryotic strains of Pleurotus ostreatus

Laccase and other ligninolytic enzyme higher-producing dikaryons of Pleurotus ostreatus were obtained after crossing of compatible basidiospore-derived monokaryons selected from the parental basidiospore population on the basis of exceptionality in enzyme production, mycelium extension rate and/or colony morphology. As all detected changes in enzyme activity, mycelium extension rate, colony appearance and degradation of the polymeric dye Poly B411 were relatively stable after repeated testing, the dikaryotic isolates prepared in this way seem to be useful for the future biotechnological exploitation. No correlation between the colony appearance or the mating type and the enzyme activity or other characteristics tested has been found.     

Degradation of phenanthrene by the endophytic fungus <Emphasis Type="Italic">Ceratobasidum stevensii</Emphasis> found in <Emphasis Type="Italic">Bischofia polycarpa</Emphasis>

Some strains of white rot fungi, non-lignolytic fungi and litter-decomposing basidiomycetes have been recognized as PAH degraders. The purpose of our research was to enlarge the scope of PAH-degrading fungi and explore the huge endophytic microorganism resource for bioremediation of PAHs. In this study, phenanthrene was used as a model PAHs compound. Nine strains of endophytic fungi isolated from four kinds of plant from Eupharbiaceae were screened for degradation of phenanthrene. The endophytic fungus Ceratobasidum stevensii (strain B6) isolated from Bischofia polycarpam showed high degradation efficiency and was selected for further studies. Into the fungal culture, 100 mg l⁻¹ phenanthrene was added, and after 10 days of incubation, about 89.51% of the phenanthrene was removed by strain B6. Extracellular ligninolytic enzyme activities of strain B6 were tested. The results showed that manganese peroxidase [MnP] was the predominant ligninolytic enzyme and that its production was greatly induced by the presence of phenanthrene. To confirm the involvement of MnP in phenanthrene degradation, promotion and inhibition studies on MnP in different concentration level of Mn²⁺ and NaN₃ were performed. Additionally, fungal mycelium-free and resuspended experiments were carried out. The results showed no apparent correlation between MnP activity and phenanthrene degradation. The mycelium and fresh medium were the crucial factors affecting the degradation of phenanthrene. To date, this is the first report on PAH degradation by Ceratobasidum stevensii. This study suggests that endophytic fungi might be a novel and important resource for microorganisms that have PAH-degrading capabilities.     

Lignocellulose degradation by Pleurotus ostreatus in the presence of cadmium

Activities of cellulolytic and hemicellulolytic enzymes endo-1,4-beta-glucanase, exo-1,4-beta-glucanase, 1,4-beta-glucosidase, endo-1,4-beta-xylanase, 1,4-beta-xylosidase and 1,4-beta-mannosidase and ligninolytic enzymes Mn-peroxidase and laccase were detected during the growth of the white-rot fungus Pleurotus ostreatus on wheat straw in the presence and absence of cadmium. The loss of substrate dry weight and Mn-peroxidase activity decreased with increasing Cd concentration, whereas the activities of endo-1,4-beta-glucanase, 1,4-beta-glucosidase and laccase were highly increased in the presence of metal. The onset of hemicellulose-degrading enzyme activity was delayed in the presence of cadmium. The degradation of a model synthetic dye Poly B-411 did not correspond to the activities of ligninolytic enzymes. This is the first report about 1,4-beta-mannosidase in P. ostreatus.     

Polar vineyard pruning extracts increase the activity of the main ligninolytic enzymes in Lentinula edodes cultures

Lentinula edodes is considered an alternative recycling agent for agricultural wastes, and there have been several studies to understand the relationship between its growth and ligninolytic activity. We tested the effect of wood from viticulture pruning, extracted with solvents of differing polarity, on the biomass production and activity pattern of ligninolytic enzymes. The analysis was done by measuring the mycelial dry mass and enzyme activity of liquid growth medium during the culture of L. edodes, adding either single extracts or a combination of extracts. Polar extracts enhanced mycelial production, and the activity patterns of lignin peroxidase, manganese peroxidase, aryl alcohol oxidase, and laccase were comparable to their activities predicted by ligninolysis models proposed for other fungi. We conclude that the polar extracts could be useful for enhancing fungal biomass production and for modifying lignin degradation because the regulation of ligninolytic enzyme activity is differentially influenced by the polarity of the extract.     

一株低温玉米秸秆降解真菌的筛选、鉴定及降解特性

【背景】在我国北方地区玉米秸秆还田时期地温低、秸秆降解慢,如何加速玉米秸秆低温腐解成为研究热点。【目的】从冷凉地区土壤中筛选具有高效降解纤维素能力的低温菌株,为秸秆的有效利用奠定基础。【方法】在低温培养条件下,采用稀释涂布平板法、羧甲基纤维素钠(sodium carboxymethyl cellulose,CMC-Na)水解圈测定法、胞外酶活测定法、秸秆失重法进行低温秸秆降解菌株的初筛、复筛和秸秆降解性能的测定;根据菌株形态学特征及ITSrDNA序列分析对筛选菌株进行鉴定;利用3,5-二硝基水杨酸(3,5-dinitrosalicylic acid,DNS)法和秸秆失重法对菌株在不同接种量、培养基初始pH、温度情况下的纤维素酶活力和玉米秸秆降解能力进行研究。【结果】以16°C为筛选温度,获得一株在刚果红-羧甲基纤维素钠平板上D/d值为2.17、CMC酶活力为703 U/mL的高产纤维素酶低温真菌SDF-25;该菌株在4°C可以生长,10-16°C为最适生长温度,37°C条件下仍能生长;综合菌株的形态学和分子生物学测定结果,菌株SDF-25为草酸青霉菌(Penicillium oxalicum);该菌株最佳产纤维素酶的培养条件为接种量2%、初始pH为7.0、培养温度为10°C,在该培养条件下菌株SDF-25的CMC酶活为993.3 U/mL。失重法测定接种SDF-25于10°C培养15 d时秸秆降解率为39.5%,16°C时为44.9%。【结论】草酸青霉菌SDF-25可在低温条件下生长并具有较强的纤维素酶生产能力,在秸秆还田方面具有良好的应用前景。     

Growth and patulin formation byPenicillium urticae Bainier in pure and mixed cultures

Penicillium urticae Bainier synthesized patulin in potato-dextrose medium at temperatures ranging from 5 to 30°C. Maximum patulin yield was 2700 μg/ml of culture fluid in 14 days at 25°C. Two distinctive intervals affected patulin formation: 15 to 20°C and 30 to 35°C, the former favorable and the latter detrimental. An incubation period of 11 to 14 days made a nonsterile mixture of weathered wheat straw and soil a favorable medium for patulin formation. Autoclaved weathered wheat straw, inoculated withP. urticae alone, or in combination withTrichoderma sp., was a medium comparable to nonsterile, incubated weathered wheat straw in soil. Both carbon source and accessory growth factors were important for patulin formation. Of seven media tested, potato-dextrose was superior to potatodextrose supplemented with 70 ppm Zn-ions and 16 ppm Fe-ions, potatosucrose, Raulin-Thom, autoclaved weathered wheat straw in pure culture, weathered wheat straw in nonsterile soil, and autoclaved weathered wheat straw in mixed culture, in that order. Patulin production ranged from 337.5 to 0.2 mg/g of C in the medium. Contribution from the Northern Plains Branch, Soil and Water Conservation Research Division, Agricultural Research Service, U.S. Department of Agriculture, in cooperation with the Nebraska Agricultural Experiment Station, Lincoln. Published as Paper No.2621, Journal Series, Nebraska Agricultural Experiment Station.     

Decolorization of synthetic dyes by<Emphasis Type="Italic">Pleurotus ostreatus</Emphasis> isolates differing in ligninolytic properties

The ability to decolorize four synthetic dyes (Phenol Red, Evans Blue, Eosin Yellowish and Poly B411) in fivePleurotus ostreatus strains (a parental strain and four isolates derived from it) was determined. Two of the isolates had markedly higher and other two substantially lower production of ligninolytic enzymes and hydrogen peroxide that the parental strain. Like the parental strain, the higher-producing isolates were able to decolorize all the tested dyes, but not to a higher extent than the parental strain. In contrast, two lower-producing isolates exhibited slow decolorization, which was incomplete even at the end of cultivation. Evans Blue and Eosin Yellowish strongly suppressed the growth of the strains, while Phenol Red and Poly B411 induced none or only a very slight growth reduction.     

Degradation of the herbicide bentazon as related to enzyme production by Phanerochaete chrysosporium in two solid substrate fermentation systems

Enzyme production and degradation of the herbicide bentazon by Phanerochaete chrysosporium growing on straw (solid substrate fermentation, SSF) and the effect of nitrogen and the hydraulic retention time (HRT) were studied using a small bioreactor and batch cultures. The best degradation of bentazon was obtained in the low nitrogen treatments, indicating participation of the ligninolytic system of the fungus. The treatments that degraded bentazon also had manganese peroxidase (MnP) activity, which seemed to be necessary for degradation. Pure MnP (with Mn(II) and H₂O₂) did not oxidize bentazon. However, in the presence of MnP, Mn(II) and Tween 80, bentazon was slowly oxidized in a H₂O₂-independent reaction. Bentazon was a substrate of pure lignin peroxidase (LiP) and was oxidized significantly faster (22,000–29,000 times) as compared to the MnP-Tween 80 system. Although LiP was a better enzyme for bentazon oxidation in vitro, its role in the SSF systems remains unclear since it was detected only in treatments with high nitrogen and high HRT where no degradation of bentazon occurred. Inhibition of LiP activity may be due to phenols and extractives present in the straw.     

Extracellular Enzyme Activity Associated with Degradation of Beech Wood in a Central European Stream

The degradation of beech wood (Fagus sylvatica L.) was followed over 16 months in a central European upland stream, the Breitenbach. 1 cm³ cubes of beech wood were placed on the stream bed and sampled at monthly intervals. Besides mass loss, fungal biomass (ergosterol content) and lignin content, the activity of two extracellular enzymes was measured: β‐D‐glucosidase, an enzyme involved in the degradation of cellulose, and phenoloxidase, a ligninolytic enzyme. The suitability of the fluorigenic model substrate methylumbelliferyl‐β‐D‐glucoside for measuring β‐D‐glucosidase activity in wood from aquatic environments was tested. This technique is much more sensitive than the conventional photometric method. The beech wood was degraded at a constant rate of k = 0.00272 d^–1 across the entire 16‐month incubation period. There was a rapid onset of microbial colonisation, as witnessed by the initial detection of enzyme activity, after only 7 days of exposure. Lignin and ergosterol content as well as β‐glucosidase activity reached their highest values at the end of the 16‐month incubation period. Phenoloxidase activity increased rapidly to a maximum after 6 weeks, and then decreased to almost zero by the end of the experiment. The combination of biochemical techniques for measuring extracellular enzyme activities with measurements of mass loss, chemical composition and microbial colonisation provided valuable insights into the decomposition of wood in aquatic environments.     

Effect of enzyme extracts isolated from white-rot fungi on chemical composition and in vitro digestibility of wheat straw

A series of in vitro experiments were completed to evaluate the potential of enzyme extracts, obtained from the white-rot fungi Trametes versicolor (TV1, TV2), Bjerkandera adusta (BA) and Fomes fomentarius (FF), to increase degradation of cell wall components of wheat straw. The studies were conducted as a completely randomized design and analysed using one-way ANOVA. Enzyme activities of the extracts, previously obtained from a liquid culture medium, were characterized in terms of laccase and peroxidase for ligninolytic activity. Carboxymethyl cellulase (CMCase) and avicell digesting cellulase (Avicelase) were used for cellulolytic enzyme assays. Wheat straw samples were incubated with enzyme extracts in a citrate buffer (pH 5.0) in a forced air oven at 25 °C for 6 days. In vitro NDF digestibility (IVNDFD), and the rate and extent of NDF fermentation, without and after incubation with the white-rot enzyme extracts, were determined using a gravimetric microbiological method and a gas production technique, respectively. Results from cell wall chemical composition showed that TV2 and BA enzyme extracts decreased NDF concentration (P<0.05) and that TV1 had higher activity (P<0.05) towards cellulose. There was an increase in IVNDFD (P<0.05), resulting from treatment of wheat straw with enzyme extracts from BA, TV1 and TV2, reaching a difference of 13% for TV2 (P<0.05), versus the non-treated straw control. Treatment with enzyme extract from TV2 caused increased gas production (P<0.05) after the first 20 h of incubation, and also increased the maximum rate of gas production, thus enhancing fermentation kinetics. This study indicates that enzyme extracts from white-rot fungi can be used to develop new approaches to overcome low digestibility of some plant cell walls. Utilization of different substrates to produce enzyme extracts can lead to production of viable ligninolytic complexes which could improve the nutritive value of fibrous feeds.     

Phytase fromAspergillus niger

132 microorganisms, isolates from soil and decayed fruits, were tested for phytase production. All isolates intensively producing active extracellular phytase were of fungal origin. The most active fungal isolates with phytase activity were identified asAspergillus niger. At the end of the growth phase, the extracellular phytase activity produced byA. niger strain 92 was 132 nkat/mL, with strain 89 it was 53 nkat/mL. In both strains the extracellular enzyme activity exhibited two marked activity optima at pH 1.8 and 5.0 and a temperature optimum at 55°C.     

Variability of ligninolytic enzyme activities in basidiospore isolates of the fungusPleurotus ostreatus in comparison with that of protoplast-derived isolates

Variability of production of all tested ligninolytic enzymes (laccase, peroxidase and manganese-dependent peroxidase) was substantially higher in isolates derived from basidiospores of strain F6 of the white-rot basidiomycetePleurotus ostreatus than the relatively low variability of the dikaryotic mycelial colonies of this strain, and also higher than the variability of protoplast-derived isolates of the same strain. The difference was caused mainly but not completely by the monokaryotic nature of the isolates. To reach the best fructification of the fungus, two fructification media were chosen from twenty two tested and a modified technique of fructification was used.     

Enhancement of bioconversion of high-molecular mass polycyclic aromatic hydrocarbons in contaminated non-sterile soil by litter-decomposing fungi

With the focus on alternative microbes for soil-bioremediation, 18 species of litter-decomposing basidiomycetous fungi were screened for their ability to grow on different lignocellulosic substrates including straw, flax and pine bark as well as to produce ligninolytic enzymes, namely laccase and manganese peroxidase. Following characteristics have been chosen as criteria for the strain selection: (i) the ability to grow at least on one of the mentioned materials, (ii) production of either of the ligninolytic enzymes and (iii) the ability to invade non-sterile soil. As the result, eight species were selected for a bioremediation experiment with an artificially contaminated soil (total polycyclic aromatic hydrocarbon (PAH) concentration 250 mg/kg soil). Up to 70%, 86% and 84% of benzo(a)anthracene, benzo(a)pyrene, and dibenzo(a,h)anthracene, respectively, were removed in presence of fungi while the indigenous microorganisms converted merely up to 29%, 26% and 43% of these compounds in 30 days. Low molecular-mass PAHs studied were easily degraded by soil microbes and only anthracene degradation was enhanced by the fungi as well. The agaric basidiomycetes Stropharia rugosoannulata and Stropharia coronilla were the most efficient PAH degraders among the litter-decomposing species used.     

Enhanced production of ligninolytic enzymes and decolorization of molasses distillery wastewater by fungi under solid state fermentation

Selected isolates of fungi were grown on wheat straw and corncob in the presence of different moistening agents such as water, molasses, potato dextrose broth and distillery effluent. All the fungal isolates responded differently with respect to growth and ligninolytic enzyme production. Fungal growth on different substrates was checked by calculating ergosterol content, which varied widely within a single species when grown on different substrates. The maximum laccase production was obtained for Aspergillus flavus TERI DB9 grown on wheat straw with molasses. For manganese peroxidase, highest production was in Aspergillus niger TERI DB20 grown on corncob with effluent. Among the two isolates positive for lignin peroxidase, the highest production was in Fusarium verticillioides ITCC 6140. This immobilized fungal biomass was then used for decolorization of effluent from a cane molasses based distillery. Maximum decolorization (86.33%) was achieved in Pleurotus ostreatus (Florida) Eger EM 1303 immobilized on corncob with molasses in a period of 28 days.     

Degradation and metabolism of tetraethyllead in soils

Summary The objective of this study was to determine the disappearance of the leaded gasoline enhancer tetraethyllead (TEL), formation of degradation products, and mass balance in nonsterile and autoclaved Leon and Madison soils. Ethyl-1-¹⁴C-labeled TEL was used so that mineralization rates of TEL and mass balance could be determined.¹⁴C-TEL in nonsterile and autoclaved surface and subsurface samples of the two soils disappeared rapidly, and ionic ethyllead products, water soluble nonlead organic products and bound residues were rapidly formed. A small fraction (7.74%) of¹⁴C-TEL in nonsterile soil samples was mineralized to¹⁴CO₂ in 28 days. Triethyllead (TREL) was the major ionic ethyllead product detected in both nonsterile and autoclaved soils; diethyllead (DEL) was occasionally detected. Recovery of¹⁴C from mass balance studies for all nonsterile and autoclaved soil samples after 28 days of incubation was poor, less than 50% of the¹⁴C applied. It appears that unknown volatile and/or gaseous organic products were the major degradation products of TEL in soils. Based on the observations of more rapid initial disappearance of¹⁴C-TEL, more rapid formation and more rapid disappearance of¹⁴C-DEL, and occurrence of¹⁴CO₂ production in nonsterile soils, it was concluded that both biological and chemical degradation contributed to the degradation of TEL in soils, with chemical degradation being the major factor.