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Synthesis of fluorescently labelled rhamnosides: probes for the evaluation of rhamnogalacturonan II biosynthetic enzymes
Authors:Prifti Efthymia  Goetz Stephan  Nepogodiev Sergey A  Field Robert A
Affiliation:Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK
Abstract:Three fluorescently labelled saccharides 1012, representing structures found in pectic glycan rhamnogalacturonan II (RG-II), were synthesised by chemical glycosylation of O-6 of diacetone-d-galactose followed by deprotection and reductive amination with amino-substituted fluorophore APTS. This convenient method installs a common aminogalactitol-based tether in order to preserve the integrity of the reducing end of specific carbohydrates of interest. APTS-labelled glycans prepared in this manner were purified by carbohydrate gel electrophoresis and subjected to capillary electrophoresis analysis, as a basis for the subsequent development of high sensitivity assays for RG-II-active enzymes.
Keywords:Glycosyltransferase assay   Fluorescent oligosaccharide   Reductive amination   APTS labelling   Capillary electrophoresis
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