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Shark detection and classification with machine learning
Affiliation:1. Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA, USA;2. Department of Computer Science, Virginia Tech, Blacksburg, VA, USA;3. Hopkins Marine Station, Stanford University, Pacific Grove, CA, USA;4. Department of Statistics and Department of Biomedical Data Science, Stanford University, CA, USA;1. Pelagios Kakunjá, La Paz, Baja California Sur, Mexico;2. Centro de Investigaciones Biológicas del Noroeste (CIBNOR), La Paz, Baja California Sur, Mexico;3. Instituto Politécnico Nacional, Centro Interdisciplinario de Ciencias Marinas, La Paz, Baja California Sur, Mexico;4. Colegio de Ciencias Biológicas y Ambientales, Universidad San Francisco de Quito, Quito, Ecuador;5. Biotelemetry Consultants, Petaluma, CA, United States;6. MigraMar, Olema, CA, United States;1. Departamento de Oceanografía Biológica, Centro de Investigación Científica y de Educación Superior de Ensenada (CICESE), Ensenada, Baja California, México;2. Pronatura Noroeste, Ensenada, Baja California, México;3. El Colegio de la Frontera Sur (ECOSUR), Lerma, Campeche, México;4. Pacific Shark Research Center, Moss Landing Marine Laboratories, Moss Landing, CA, United States;5. Institute of Marine Sciences, University of California, Santa Cruz, CA, United States;6. Instituto Nacional de Pesca y Acuacultura, National Fisheries and Aquaculture Institute, Centro Regional de Investigación Pesquera Ensenada, Ensenada, Baja California, México;1. Centre for Sustainable Tropical Fisheries and Aquaculture, James Cook University, 1 James Cook Drive, Townsville, QLD 4811, Australia;2. Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia;3. WorldFish, Batu Maung, Malaysia;1. School of Ocean Sciences, Bangor University, Menai Bridge, Anglesey LL59 5AB, United Kingdom;2. Marine Stewardship Council, Marine House, 1 Snow Hill, London EC1A 2DH, United Kingdom;3. Centre for Environment, Fisheries & Aquaculture Science, Pakefield Road, Lowestoft, Suffolk NR33 0HT, United Kingdom;4. School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich, Norfolk NR4 7TJ, United Kingdom
Abstract:Suitable shark conservation depends on well-informed population assessments. Direct methods such as scientific surveys and fisheries monitoring are adequate for defining population statuses, but species-specific indices of abundance and distribution coming from these sources are rare for most shark species. We can rapidly fill these information gaps by boosting media-based remote monitoring efforts with machine learning and automation.We created a database of 53,345 shark images covering 219 species of sharks, and packaged object-detection and image classification models into a Shark Detector bundle. The Shark Detector recognizes and classifies sharks from videos and images using transfer learning and convolutional neural networks (CNNs). We applied these models to common data-generation approaches of sharks: collecting occurrence records from photographs taken by the public or citizen scientists, processing baited remote camera footage and online videos, and data-mining Instagram. We examined the accuracy of each model and tested genus and species prediction correctness as a result of training data quantity.The Shark Detector can classify 47 species pertaining to 26 genera. It sorted heterogeneous datasets of images sourced from Instagram with 91% accuracy and classified species with 70% accuracy. It located sharks in baited remote footage and YouTube videos with 89% accuracy, and classified located subjects to the species level with 69% accuracy. All data-generation methods were processed without manual interaction.As media-based remote monitoring appears to dominate methods for observing sharks in nature, we developed an open-source Shark Detector to facilitate common identification applications. Prediction accuracy of the software pipeline increases as more images are added to the training dataset. We provide public access to the software on our GitHub page.
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