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Metabolic fingerprinting of wild type and transgenic tobacco plants by 1H NMR and multivariate analysis technique
Authors:Choi Hyung-Kyoon  Choi Young Hae  Verberne Marianne  Lefeber Alfons W M  Erkelens Cornelis  Verpoorte Robert
Affiliation:Department of Pharmacognosy, Section of Metabolomics, Institute of Biology, Leiden University, PO Box 9502, 2300 RA Leiden, The Netherlands.
Abstract:The metabolomic analysis of wild type and constitutive salicylic acid producing tobacco plants (CSA tobacco, Nicotiana tabacum 'Samsun' NN) plants overexpressing salicylate biosynthetic genes was carried out by 1H NMR spectrometry and multivariate analysis techniques. The principle component analysis (PCA) of the 1H NMR spectra showed a clear discrimination between those samples by PC1 and PC2. The discrimination of non-inoculated, TMV-virus inoculated, and systemic leaves or veins could also be obtained by PCA analysis. Major peaks in 1H NMR spectra contributing to the discrimination were assigned as those of chlorogenic acid, malic acid, and sugars. This method allows an efficient differentiation between wild type and transgenic plants without any pre-purification steps.
Keywords:Metabolomic analysis   Tobacco   Nicotiana tabacum   1H NMR   Multivariate analysis   Salicylic acid
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