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Shifts in rDNA levels act as a genome buffer promoting chromosome homeostasis
Authors:Anna Deregowska  Jagoda Adamczyk  Aleksandra Kwiatkowska  Artur Gurgul  Marek Skoneczny  Adrianna Skoneczna  Tomasz Szmatola  Igor Jasielczuk  Michal Magda  Ewa Rawska  Sylwia Pabian  Anita Panek  Jakub Kaplan  Anna Lewinska  Maciej Wnuk
Abstract:The nucleolus is considered to be a stress sensor and rDNA-based regulation of cellular senescence and longevity has been proposed. However, the role of rDNA in the maintenance of genome integrity has not been investigated in detail. Using genomically diverse industrial yeasts as a model and array-based comparative genomic hybridization (aCGH), we show that chromosome level may be balanced during passages and as a response to alcohol stress that may be associated with changes in rDNA pools. Generation- and ethanol-mediated changes in genes responsible for protein and DNA/RNA metabolism were revealed using next-generation sequencing. Links between redox homeostasis, DNA stability, and telomere and nucleolus states were also established. These results suggest that yeast genome is dynamic and chromosome homeostasis may be controlled by rDNA.
Keywords:chromosomes   ethanol   genome profiling   industrial yeasts   rDNA   selective pressure
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