ESTWeb: bioinformatics services for EST sequencing projects |
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Authors: | Paquola Apuã C M Nishyiama Milton Y Reis Eduardo M da Silva Aline M Verjovski-Almeida Sergio |
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Affiliation: | Departamento de Bioquímica, Instituto de Química, Universidade de S?o Paulo, 05508-900, S?o Paulo, SP, Brazil. |
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Abstract: | ESTWeb is an internet based software package designed for uniform data processing and storage for large-scale EST sequencing projects. The package provides for: (a) reception of sequencing chromatograms; (b) sequence processing such as base-calling, vector screening, comparison with public databases; (c) storage of data and analysis in a relational database, (d) generation of a graphical report of individual sequence quality; and (e) issuing of reports with statistics of productivity and redundancy. The software facilitates real-time monitoring and evaluation of EST sequence acquisition progress along an EST sequencing project. |
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