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Structural correlates of antimicrobial efficacy in IL-8 and related human kinocidins
Authors:Nannette Y. Yount  Alan J. Waring  Kimberly D. Gank  William H. Welch  Michael R. Yeaman
Affiliation:a Division of Infectious Diseases, LAC-Harbor UCLA Medical Center, Torrance, CA 90509, USA
b St. John’s Cardiovascular Research Center, Torrance, CA 90502, USA
c Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, CA 90024, USA
d Department of Biochemistry, University of Nevada, Reno, NV 89557, USA
Abstract:Chemokines are small (8-12 kDa) effector proteins that potentiate leukocyte chemonavigation. Beyond this role, certain chemokines have direct antimicrobial activity against human pathogenic organisms; such molecules are termed kinocidins. The current investigation was designed to explore the structure-activity basis for direct microbicidal activity of kinocidins. Amino acid sequence and 3-dimensional analyses demonstrated these molecules to contain iterations of the conserved γ-core motif found in broad classes of classical antimicrobial peptides. Representative CXC, CC and C cysteine-motif-group kinocidins were tested for antimicrobial activity versus human pathogenic bacteria and fungi. Results demonstrate that these molecules exert direct antimicrobial activity in vitro, including antibacterial activity of native IL-8 and MCP-1, and microbicidal activity of native IL-8. To define molecular determinants governing its antimicrobial activities, the IL-8 γ-core (IL-8γ) and α-helical (IL-8α) motifs were compared to native IL-8 for antimicrobial efficacy in vitro. Microbicidal activity recapitulating that of native IL-8 localized to the autonomous IL-8α motif in vitro, and demonstrated durable microbicidal activity in human blood and blood matrices ex vivo. These results offer new insights into the modular architecture, context-related deployment and function, and evolution of host defense molecules containing γ-core motifs and microbicidal helices associated with antimicrobial activity.
Keywords:PF-4, platelet factor 4   PMP, platelet microbicidal protein   PBP, platelet basic protein   CTAP-3, connective tissue-activating peptide 3   β-TG, beta thromboglobulin   NAP-2, neutrophil activating peptide-2   RANTES, releasable upon activation, normal T cell expressed and secreted   CXC, cysteine-X-cysteine   CC, cysteine-cysteine   CXCR, CXC receptor   CCR, CC receptor   YNB, yeast nitrogen broth   QSAR, quantitative structure-activity relationship   CD, circular dichroism   F-moc, (9-fluorenyl-methyloxycarbonyl)   TFA, trifluoroacetic acid   MALDI-TOF, matrix-assisted laser desorption ionization time-of-flight   PIPES, piperazine-N,N&prime  -bis[2-ethanesulfonic acid]   Da, daltons, and standard single letter codes for amino acids
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