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Structural correlates of antimicrobial efficacy in IL-8 and related human kinocidins
Authors:Nannette Y Yount  Alan J Waring  Kimberly D Gank  William H Welch  Michael R Yeaman
Institution:a Division of Infectious Diseases, LAC-Harbor UCLA Medical Center, Torrance, CA 90509, USA
b St. John’s Cardiovascular Research Center, Torrance, CA 90502, USA
c Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, CA 90024, USA
d Department of Biochemistry, University of Nevada, Reno, NV 89557, USA
Abstract:Chemokines are small (8-12 kDa) effector proteins that potentiate leukocyte chemonavigation. Beyond this role, certain chemokines have direct antimicrobial activity against human pathogenic organisms; such molecules are termed kinocidins. The current investigation was designed to explore the structure-activity basis for direct microbicidal activity of kinocidins. Amino acid sequence and 3-dimensional analyses demonstrated these molecules to contain iterations of the conserved γ-core motif found in broad classes of classical antimicrobial peptides. Representative CXC, CC and C cysteine-motif-group kinocidins were tested for antimicrobial activity versus human pathogenic bacteria and fungi. Results demonstrate that these molecules exert direct antimicrobial activity in vitro, including antibacterial activity of native IL-8 and MCP-1, and microbicidal activity of native IL-8. To define molecular determinants governing its antimicrobial activities, the IL-8 γ-core (IL-8γ) and α-helical (IL-8α) motifs were compared to native IL-8 for antimicrobial efficacy in vitro. Microbicidal activity recapitulating that of native IL-8 localized to the autonomous IL-8α motif in vitro, and demonstrated durable microbicidal activity in human blood and blood matrices ex vivo. These results offer new insights into the modular architecture, context-related deployment and function, and evolution of host defense molecules containing γ-core motifs and microbicidal helices associated with antimicrobial activity.
Keywords:PF-4  platelet factor 4  PMP  platelet microbicidal protein  PBP  platelet basic protein  CTAP-3  connective tissue-activating peptide 3  β-TG  beta thromboglobulin  NAP-2  neutrophil activating peptide-2  RANTES  releasable upon activation  normal T cell expressed and secreted  CXC  cysteine-X-cysteine  CC  cysteine-cysteine  CXCR  CXC receptor  CCR  CC receptor  YNB  yeast nitrogen broth  QSAR  quantitative structure-activity relationship  CD  circular dichroism  F-moc  (9-fluorenyl-methyloxycarbonyl)  TFA  trifluoroacetic acid  MALDI-TOF  matrix-assisted laser desorption ionization time-of-flight  PIPES  piperazine-N  N&prime  -bis[2-ethanesulfonic acid]  Da  daltons  and standard single letter codes for amino acids
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