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Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines
Authors:Jiren?Wang  Wing-Kin?Sung  Email author" target="_blank">Arun?KrishnanEmail author  Email author" target="_blank">Kuo-Bin?LiEmail author
Institution:(1) Bioinformatics Institute, 30 Biopolis Street, #07-01 Matrix, Singapore, 138671;(2) Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543
Abstract:

Background  

Predicting the subcellular localization of proteins is important for determining the function of proteins. Previous works focused on predicting protein localization in Gram-negative bacteria obtained good results. However, these methods had relatively low accuracies for the localization of extracellular proteins. This paper studies ways to improve the accuracy for predicting extracellular localization in Gram-negative bacteria.
Keywords:
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