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Anaerocolumna sedimenticola sp. nov., isolated from fresh water sediment
Authors:Kim  Juseok  Kim  Joon Yong  Song  Hye Seon  Kim  Yeon Bee  Whon  Tae Woong  Ahn  Seung Woo  Lee  Se Hee  Yoo  SeungRan  Kim  Yu Jin  Myoung  Jinjong  Choi  Yoon-E  Son  Hong-Seok  Roh  Seong Woon
Institution:1.Microbiology and Functionality Research Group and Industrial Technology Research Group, World Institute of Kimchi, Gwangju, 61755, Republic of Korea
;2.Division of Environmental Science and Ecological Engineering, Korea University, Seoul, 02841, Republic of Korea
;3.Korea Zoonosis Research Institute, Chonbuk National University, Jeollabuk-do, 54531, Republic of Korea
;4.Department of Food Biosciences and Technology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea
;
Abstract:

Strain CBA3638T was isolated from the Geum River sediment, Republic of Korea. The cells of strain CBA3638T were Gram-stain-positive, strictly anaerobic, rod-shaped, and 0.5–1.0 μm wide, and 4.0–4.5 μm long. Optimal growth occurred at 37 °C, pH 7.0, and 1.0% (w/v) NaCl. Based on the 16S rRNA gene sequence, the phylogenetic analysis showed that strain CBA3638T belongs to the genus Anaerocolumna in the family Lachnospiraceae, and is most closely related to Anaerocolumna cellulosilytica (94.6–95.0%). The DDH value with A. cellulosilytica SN021T showed 15.0% relatedness. The genome of strain CBA3638T consisted of one circular chromosome that is 5,500,435 bp long with a 36.7 mol% G?+?C content. The genome contained seven 16S-5S-23S rRNA operons and one antibiotic resistance-related transporter gene (mefA). Quinones were not detected. The predominant cellular fatty acids were C16:0 and C14:0 and the polar lipids were diphosphatidylglycerol, phosphatidylcholine, and uncharacterised polar lipids. Based on the polyphasic taxonomic analysis, we propose strain CBA3638T as a novel species in the genus Anaerocolumna, with the name Anaerocolumna sedimenticola sp. nov. The type strain is CBA3638T (=?KACC 21652T?=?DSM 110663T).

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