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Assessment of random amplified polymorphic DNA (RAPD) for determining the origin ofYoungia koidzumiana Kitamura (compositae)
Authors:Kyoung-Hwan Tae  Dong Su In  Kee-Sun Shin
Affiliation:(1) Korea Native Plants Institute, Dongbu Research Council, Moonji-Dong, Daeduck Science Town, 305-708 Taejon, Korea;(2) Eugentech, 305-600 Yusong, Taejon, Korea;(3) Korean Collection for Type Cultures, Korea Research Institute of Bioscience & Biotechnology, 305-600 Yusong, Taejon, Korea
Abstract:We determined the parental species ofYoungia koidzumiana (a natural interspecific hybrid) using PCR and arbitrary 10-mer primers to generate random amplified polymorphic DNA (RAPD) markers. These markers, generated by three primers, were sufficient to distinguishYoungia sonchifolia, Youngia denticulata, Youngia chelidoniifolia, andY. koidzumiana. The electrophoresis profiles of the amplified products from each of the four species were then compared. Three primers produced a total of 42 scorable markers; nine were specific markers forY. denticulata andY. chelidoni-ifolia. The length of the amplified DNA fragments ranged from 370 to 2500 b p. The three primers revealed polymorphic bands, which were indicators of the parental species ofY. koidzumiana. These bands showed a combination of specific profiles forY. denticulata andY. chelidoniifolia. Our results also were comparable to the data obtained for flowering times, floret numbers, and chromosome numbers of the four species. Therefore, we suggest thatY. koidzumiana is a hybrid betweenY. denticulata andY. chelidoniifolia}, and that RAPD markers are well suited for assessing the origins of plant species.
Keywords:genetic markers  interspecific hybrid  random amplified polymorphic DNA (RAPD)   Youngia koidzumiana
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