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16S rDNA克隆文库法探索转基因香石竹对土壤细菌群落的影响
引用本文:白蓝,赵明文,贾军伟,李鹏,王金斌,潘爱虎. 16S rDNA克隆文库法探索转基因香石竹对土壤细菌群落的影响[J]. 微生物学通报, 2012, 39(4): 0435-0447
作者姓名:白蓝  赵明文  贾军伟  李鹏  王金斌  潘爱虎
作者单位:1. 上海市农业科学院生物技术研究所 上海市农业遗传育种重点实验室 农业部转基因植物环境安全监督检验测试中心(上海) 上海 201106
2. 南京农业大学 生命科学学院 农业部农业环境微生物工程重点开放实验室 江苏 南京 210095
基金项目:上海市科技兴农重点攻关项目(No.沪农科攻字2008第8-9号);转基因生物新品种培育重大专项课题(No.2008ZX08012-001)
摘    要:【目的】通过研究转基因香石竹对土壤细菌群落的影响,为转基因香石竹的环境安全性评价提供依据。【方法】通过构建16S rDNA克隆文库,分析种植转基因和非转基因香石竹的土壤中细菌的群落结构组成。【结果】转基因和非转基因香石竹土壤中,共有的菌群有变形菌门(Proteobacteria)、浮霉菌门(Planctomycetes)、酸杆菌门(Acidobacteria),其中α-变形菌门、β-变形菌门、浮霉菌门为优势菌群;而在放线菌门(Actinobacteria)、疣微菌门(Verrucomicrobia)及未培养菌(Uncultured bacterium clone)等菌群存在部分差异。【结论】通过16S rDNA克隆文库方法揭示了转基因香石竹的土壤中细菌多样性十分丰富,其栽培对土壤细菌群落结构影响有限。

关 键 词:16S rDNA克隆文库法  转基因香石竹  土壤细菌群落

Analysis of soil bacterial community composition by 16S rDNA clone library sampling from transgenic carnation
BAI Lan,ZHAO Ming-Wen,JIA Jun-Wei,LI Peng,WANG Jin-Bin and PAN Ai-Hu. Analysis of soil bacterial community composition by 16S rDNA clone library sampling from transgenic carnation[J]. Microbiology China, 2012, 39(4): 0435-0447
Authors:BAI Lan  ZHAO Ming-Wen  JIA Jun-Wei  LI Peng  WANG Jin-Bin  PAN Ai-Hu
Affiliation:1. Biotech Research Institute of Shanghai Academy of Agricultural Sciences, Shanghai Key Laboratory of Agricultural Genetics and Breeding, Supervision, Inspection and Test Center for Environment Safety of GM Crops of MOA (Shanghai), Shanghai 201106, China;2. Key Lab of Microbiological Engineering of Agricultural Environment, Ministry of Agriculture, College of Life Sciences, Nanjing Agricultural University, Nanjing Jiansu 210095, China;1. Biotech Research Institute of Shanghai Academy of Agricultural Sciences, Shanghai Key Laboratory of Agricultural Genetics and Breeding, Supervision, Inspection and Test Center for Environment Safety of GM Crops of MOA (Shanghai), Shanghai 201106, China
Abstract:[Objective] We did this research to analyze the impact on the soil bacterial population of the transgenic carnation, which laid the foundation for the safety assessment of GM carnation. [Methods] Bacterial 16S rDNA gene clone libraries of GM and non-GM carnations were constructed, and the soil bacterial populations of these carnations were compared. [Results] The results showed Alphaproteobacteria, Betaproteobacteria, Planctomycetes and Acidobacteria were shared with GM and non-GM carnation. Some differences were found in Actinobacteria, Verrucomicrobia and uncultured bacterium clone. [Conclusion] The results indicated that high bacterial diversity was found in these GM carnation soil bacterial libraries, and the cultivation of genetically modified carnation did not have a significant impact on the soil bacterial community structure.
Keywords:16S rDNA clone library   Transgenic carnation   Soil bacterial community
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