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Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes |
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| Authors: | John A St John Edward L Braun Sally R Isberg Lee G Miles Amanda Y Chong Jaime Gongora Pauline Dalzell Christopher Moran Bertrand Bed’Hom Arkhat Abzhanov Shane C Burgess Amanda M Cooksey Todd A Castoe Nicholas G Crawford Llewellyn D Densmore Jennifer C Drew Scott V Edwards Brant C Faircloth Matthew K Fujita Matthew J Greenwold Federico G Hoffmann Jonathan M Howard Taisen Iguchi Daniel E Janes Shahid Yar Khan Satomi Kohno AP Jason de Koning Stacey L Lance Fiona M McCarthy John E McCormack Mark E Merchant Daniel G Peterson David D Pollock Nader Pourmand Brian J Raney Kyria A Roessler Jeremy R Sanford Roger H Sawyer Carl J Schmidt Eric W Triplett Tracey D Tuberville Miryam Venegas-Anaya Jason T Howard Erich D Jarvis Louis J Guillette Jr Travis C Glenn Richard E Green David A Ray |
| Institution: | 1. Department of Biomolecular Engineering, University of California, Santa Cruz, CA, 95064, USA 2. Department of Biology, University of Florida, Gainesville, FL, 32611, USA 3. Porosus Pty Ltd, PO Box 86, Palmerston, NT 0831, Australia 5. Faculty of Veterinary Science, University of Sydney, Sydney, NSW, 2006, Australia 4. South Eastern Area Laboratory Services, Randwick, NSW, 2031, Australia 6. UMR1313 Animal Genetics and Integrative Biology, INRA, AgroParisTech, Jouy-en-Josas, F78352, France 7. Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, 02138, USA 8. Institute for Genomics, Biocomputing and Biotechnology, Mississippi State University, Mississippi State, MS, 39762, USA 9. Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, 80045, USA 10. Department of Biology, Boston University, 5 Cummington Street, Boston, MA, 02215, USA 11. Department of Biological Sciences, Texas Tech University, Lubbock, TX, 79409, USA 12. Department of Microbiology and Cell Science, University of Florida, Gainesville, FL, 32611, USA 13. Department of Ecology and Evolutionary Biology, University of California, 621 Charles E. Young Drive South, Los Angeles, CA, 90095, USA 14. Department of Biological Sciences, University of South Carolina, Columbia, SC, 29205, USA 15. Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS, 39762, USA 16. Department of Molecular, Cell & Developmental Biology, University of California, Santa Cruz, CA, 95064, USA 17. Okazaki Institute for Integrative Bioscience, National Institute for Basic Biology, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, 444-8787, Japan 18. Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Ave, Cambridge, MA, 02138, USA 19. National Institute of General Medical Sciences, National Institutes of Health, Bethesda, MD, 2089, USA 20. Hollings Marine Laboratory, Marine Biomedicine and Environmental Sciences, Department of Obstetrics and Gynecology, Medical University of South Carolina, Charleston, SC, 29412, USA 21. Savannah River Ecology Laboratory, University of Georgia, PO Drawer E, Aiken, SC, 29802, USA 22. College of Veterinary Medicine, Mississippi State University, State, MS, 39762, USA 23. Moore Laboratory of Zoology, Occidental College, 1600 Campus Rd, Los Angeles, CA, 90041, USA 24. Department of Chemistry, McNeese State University, Lake Charles, LA, 70609, USA 25. Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, 39762, USA 26. Center for Biomolecular Science and Engineering, University of California, Santa Cruz, CA, 95064, USA 27. Department of Animal & Food Sciences, University of Delaware, Newark DE, 19717, USA 28. Department of Microbiology and Cell Science, University of Florida, Gainesville, FL, 32611, USA 29. Department of Neurobiology, Howard Hughes Medical Institute, Duke University Medical Center, Box 3209, Durham, NC, 27710, USA 30. Department of Environmental Health Science and Georgia Genomics Facility, Environmental Health Science Building, University of Georgia, Athens, GA, 30602, USA |
| Abstract: | The International Crocodilian Genomes Working Group (ICGWG) will sequence and assemble the American alligator (Alligator mississippiensis), saltwater crocodile (Crocodylus porosus) and Indian gharial (Gavialis gangeticus) genomes. The status of these projects and our planned analyses are described. |
| Keywords: | Genomics evolution Crocodylia Archosauria amniote |
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