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Rationalization of allosteric pathway in Thermus sp. GH5 methylglyoxal synthase
Authors:Shekufeh Zareian  Khosro Khajeh  Mohammad Pazhang  Bijan Ranjbar
Institution:1.Department of Biochemistry, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran;2.Department of Cellular and Molecular Biology, Faculty of Science, Azarbaijan University of Tarbiat Moallem, Tabriz, Iran;3.Department of Biophysics, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran
Abstract:A sequence of 10 amino acids at the C-terminus region of methylglyoxal synthase from Escherichia coli (EMGS) provides an arginine, which plays a crucial role in forming a salt bridge with a proximal aspartate residue in the neighboring subunit, consequently transferring the allosteric signal between subunits. In order to verify the role of arginine, the gene encoding MGS from a thermophile species, Thermus sp. GH5 (TMGS) lacking this arginine was cloned with an additional 30 bp sequence at the 3´-end and then expressed in form of a fusion TMGS with a 10 residual segment at the C-terminus (TMGS+). The resulting recombinant enzyme showed a significant increase in cooperativity towards phosphate, reflected by a change in the Hill coefficient (nH) from 1.5 to 1.99. Experiments including site directed mutagenesis for Asp-10 in TMGS and TMGS+, two dimentional structural survey, fluorescence and irreversible thermoinactivation were carried out to confirm this pathway. BMB Reports 2012; 45(12): 748-753]
Keywords:Allosteric pathway  Cooperativity  Hill coefficient  Methylglyoxal synthase  Structural compactness
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