OMSSAGUI: An open-source user interface component to configure and run the OMSSA search engine |
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| Authors: | Tharakan Ravi Martens Lennart Van Eyk Jennifer E Graham David R |
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| Institution: | Department of Medicine, Bayview NHLBI Proteomics Center, Johns Hopkins School of Medicine Bayview Campus, Baltimore, MD, USA. |
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| Abstract: | We here present a user-friendly and extremely lightweight tool that can serve as a stand-alone front-end for the Open MS Search Algorithm (OMSSA) search engine, or that can directly be used as part of an informatics processing pipeline for MS driven proteomics. The OMSSA graphical user interface (OMSSAGUI) tool is written in Java, and is supported on Windows, Linux, and OSX platforms. It is an open source under the Apache 2 license and can be downloaded from http://code.google.com/p/mass-spec-gui/. |
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| Keywords: | Bioinformatics Protein identification |
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