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NMR study of the modified base resonances of tRNA tyr- coli
Authors:K M Koehler  P G Schmidt
Institution:School of Chemical Sciences, University of Illinois Urbana, Illinois 61801 USA
Abstract:220MHz NMR spectra at 28° show several resolved resonances in the high field region for D2O solutions of tyrosine specific tRNA from E. coli. These resonances are tentatively identified as arising from protons of the modified nucleoside, 2-methylthio-N6-(Δ2-isopentenyl)-adenosine and from the modified guanosine of unknown structure in the “wobble position” of the anti codon loop. Assignment of resonances was aided by comparison with spectra of tRNAsu+IIItyr, Form II, whose sequence is closely homologous to tRNAcolityr, except for changes in some modified bases. Line widths of resolved resonances indicate that, at 28°, the methyl groups of modified nucleosides are not completely restricted in their motion relative to the overall motion of the macromolecule.
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