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用人工神经网络方法确定真核基因启动子
引用本文:蔡煜东 周斌. 用人工神经网络方法确定真核基因启动子[J]. 生物数学学报, 1994, 9(1): 77-80
作者姓名:蔡煜东 周斌
作者单位:中国科学院上海冶金研究所!上海200050(蔡煜东),中国科学院上海生物工程研究中心!上海200233(周斌,陈常庆),华东师范大学数学系!上海20062(陈德辉)
摘    要:本文运用神经网络方法,并结合分子生物学的有关理论与实验统计事实,对真核基因启动子区域进行了识别.文中选择了人类、牛、猪、猫、山羊、兔、绵羊、大鼠、小鼠、小马、仓鼠、鸡、鸭、大豆等共13种真核生物360个基因组,作为研究对象.学习组选择了300个基因组,预测组选择了60基因组.结果表明,将神经网络模型与基因理论相结合,能够运用计算方法,从大量的可能启动子组合中排列出唯一的启动子区域.

关 键 词:真核基因  启动子  TATA盒  CAAT盒  GC盒  人工神经网络  “反向传播”模型

DETERMINATION OF PROMOTER IN EUKARYOTIC GENE BY NEURAL NETWORK APPROACH
Cai Yudong,Zhou Bin,Chen Changqing,Chen Dehui. DETERMINATION OF PROMOTER IN EUKARYOTIC GENE BY NEURAL NETWORK APPROACH[J]. Journal of Biomathematics, 1994, 9(1): 77-80
Authors:Cai Yudong  Zhou Bin  Chen Changqing  Chen Dehui
Abstract:In this paper,a neural network method(including molecubiology theory and expermental statistical facts)was applied to predict the promoter locations in eukaryotic gene.360 genes of 14 kinds of organisms including human,bull,pig,cat,goat,rabbit,sheep,rat,mouse,house,hamster,chicken,duck and bean were selected as an object of study.In thses genes,300 genes were selected as the training set to construct a net-work model and other 60 genes were used as the samples for prediction.As a result,by using neural network method and gene thegry,the position of promoter could be obtained by computer from numerous possible combinations of predicted promoters.
Keywords:Eukaryote Gene  Promoter  TATA box.CAAT box  GC box  Artificial Neural Network  Back-Propagation Model.  
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