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Haplotype study of West European and North African Unverricht-Lundborg chromosomes: evidence for a few founder mutations
Authors:Moulard Bruno  Genton Pierre  Grid Djamel  Jeanpierre Marc  Ouazzani Réda  Mrabet Amel  Morris Mike  LeGuern Eric  Dravet Charlotte  Mauguière François  Utermann Barbara  Baldy-Moulinier Michel  Belaidi Halima  Bertran Françoise  Biraben Arnaud  Ali Chérif André  Chkili Taieb  Crespel Arielle  Darcel Françoise  Dulac Olivier  Geny Christian  Humbert-Claude Véronique  Kassiotis Philippe  Buresi Catherine  Malafosse Alain
Institution:Division de Neuropsychiatrie, Unité de Biochimie Génétique, H?pitaux Universitaires de Genève, H?ital Belle-Idée, Chêne-Bourg, Switzerland. b-moulard@chu-montpellier.fr
Abstract:Unverricht-Lundborg disease (ULD) is a progressive myoclonus epilepsy common in Finland and North Africa, and less common in Western Europe. ULD is mostly caused by expansion of a dodecamer repeat in the cystatin B gene ( CSTB) promoter. We performed a haplotype study of ULD chromosomes (ULDc) with the repeat expansion. We included 48 West European Caucasian (WEC) and 47 North African (NA) ULDc. We analysed eight markers flanking CSTB(GT10-D21S1890-D21S1885-D21S2040-D21S1259- CSTB-D21S1912-PFKL-D21S171) and one intragenic variant in the CSTB 3' UTR (A2575G). We observed a founder effect in most of the NA ULD patients, as 61.7% of the NA ULDc (29/47) shared the same haplotype, A1 (1-1-A-1-6-7), for markers D21S1885-D21S2040-A2575G-D21S1259-D21S1912-PFKL. Moreover, if we considered only the markers D21S1885, D21S2040, A2575G and D21S1259, 43 of the 47 NA ULDc shared the same alleles 1-1-A-1, haplotype A. As previously shown, the WEC ULDc were heterogeneous. However, the Baltic haplotype, A3 (5-1-1-A-1-1), was observed in ten WEC ULDc (20.8%) and the CSTB 3'UTR variant, which we called the Alps variant, was observed in 17 ULDc (35.4%). Finally, as almost all NA patients, like Scandinavian patients, were of the haplotype A, we assumed that there was an ancient common founder effect in NA and Baltic ULD patients. We estimated that the putative most recent common ancestral ULD carrier with this haplotype A must have existed about 2,500 years ago (100-150 generations). Finally, this work provides evidence for the existence of only a small number of founder mutations in ULD.
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