A comparative proteomics resource: proteins of <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis>期刊界 All Journals 搜尽天下杂志传播学术成果专业期刊搜索期刊信息化学术搜索

A comparative proteomics resource: proteins of Arabidopsis thaliana

Authors:	Wilfred?W?Li,Greg?B?Quinn,Nickolai?N?Alexandrov,Philip?E?Bourne author-information" > author-information__contact u-icon-before" > mailto:bourne@sdsc.edu" title=" bourne@sdsc.edu" itemprop=" email" data-track=" click" data-track-action=" Email author" data-track-label=" " >Email author,Ilya?N?Shindyalov

Affiliation:	(1) San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, 92093-0505 La Jolla, CA, USA;(2) Ceres Inc., 3007 Malibu Canyon Road, 90265 Malibu, CA, USA;(3) Department of Pharmacology, University of California San Diego, 9500 Gilman Drive, 92093 La Jolla, CA, USA;

Abstract:	Using an integrative genome annotation pipeline (iGAP) for proteome-wide protein structure and functional domain assignment, we analyzed all the proteins of Arabidopsis thaliana. Three-dimensional structures at the level of the domain are assigned by fold recognition and threading based on a novel fold library that extends common domain classifications. iGAP is being applied to proteins from all available proteomes as part of a comparative proteomics resource. The database is accessible from the web.

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