Advances in biomolecular simulations: methodology and recent applications |
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Authors: | Norberg Jan Nilsson Lennart |
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Affiliation: | Center for Structural Biochemistry, Department of Biosciences at Novum, Karolinska Institutet, SE-141 57 Huddinge, Sweden. Jan.Norberg@biosci.ki.se |
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Abstract: | Molecular dynamics simulations are widely used today to tackle problems in biochemistry and molecular biology. In the 25 years since the first simulation of a protein computers have become faster by many orders of magnitude, algorithms and force fields have been improved, and simulations can now be applied to very large systems, such as protein-nucleic acid complexes and multimeric proteins in aqueous solution. In this review we give a general background about molecular dynamics simulations, and then focus on some recent technical advances, with applications to biologically relevant problems. |
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