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Complete genome sequence of Saccharomonospora viridis type strain (P101)
Authors:Pati Amrita  Sikorski Johannes  Nolan Matt  Lapidus Alla  Copeland Alex  Glavina Del Rio Tijana  Lucas Susan  Chen Feng  Tice Hope  Pitluck Sam  Cheng Jan-Fang  Chertkov Olga  Brettin Thomas  Han Cliff  Detter John C  Kuske Cheryl  Bruce David  Goodwin Lynne  Chain Patrick  D'haeseleer Patrik  Chen Amy  Palaniappan Krishna  Ivanova Natalia  Mavromatis Konstantinos  Mikhailova Natalia  Rohde Manfred  Tindall Brian J  Göker Markus  Bristow Jim  Eisen Jonathan A  Markowitz Victor  Hugenholtz Philip  Kyrpides Nikos C  Klenk Hans-Peter
Abstract:Saccharomonospora viridis (Schuurmans et al. 1956) Nonomurea and Ohara 1971 is the type species of the genus Saccharomonospora which belongs to the family Pseudonocardiaceae. S. viridis is of interest because it is a Gram-negative organism classified among the usually Gram-positive actinomycetes. Members of the species are frequently found in hot compost and hay, and its spores can cause farmer's lung disease, bagassosis, and humidifier fever. Strains of the species S. viridis have been found to metabolize the xenobiotic pentachlorophenol (PCP). The strain described in this study has been isolated from peat-bog in Ireland. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the family Pseudonocardiaceae, and the 4,308,349 bp long single replicon genome with its 3906 protein-coding and 64 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keywords:thermophile  hot compost  Gram-negative actinomycete  farmer’s lung disease  bagassosis  humidifier fever  pentachlorophenol metabolism  Pseudonocardiaceae
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