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Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845)
Authors:Mavrommatis Konstantinos  Gronow Sabine  Saunders Elizabeth  Land Miriam  Lapidus Alla  Copeland Alex  Glavina Del Rio Tijana  Nolan Matt  Lucas Susan  Chen Feng  Tice Hope  Cheng Jan-Fang  Bruce David  Goodwin Lynne  Pitluck Sam  Pati Amrita  Ivanova Natalia  Chen Amy  Palaniappan Krishna  Chain Patrick  Hauser Loren  Chang Yun-Juan  Jeffries Cynthia D  Brettin Thomas  Detter John C  Han Cliff  Bristow James  Göker Markus  Rohde Manfred  Eisen Jonathan A  Markowitz Victor  Kyrpides Nikos C  Klenk Hans-Peter  Hugenholtz Philip
Abstract:Capnocytophaga ochracea (Prévot et al. 1956) Leadbetter et al. 1982 is the type species of the genus Capnocytophaga. It is of interest because of its location in the Flavobacteriaceae, a genomically not yet charted family within the order Flavobacteriales. The species grows as fusiform to rod shaped cells which tend to form clumps and are able to move by gliding. C. ochracea is known as a capnophilic (CO(2)-requiring) organism with the ability to grow under anaerobic as well as aerobic conditions (oxygen concentration larger than 15%), here only in the presence of 5% CO(2). Strain VPI 2845(T), the type strain of the species, is portrayed in this report as a gliding, Gram-negative bacterium, originally isolated from a human oral cavity. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the flavobacterial genus Capnocytophaga, and the 2,612,925 bp long single replicon genome with its 2193 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keywords:gliding   capnophilic   periodontitis   gingivitis   Flavobacteriaceae
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