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Tandem 5S ribosomal RNA genes and the spacer region sequences of three Japanese Laminaria species
Authors:Norishige Yotsukura  Tadashi Kawai  Taizo Motomura  Terunobu Ichimura
Institution:(1) Muroran Marine Station, Field Science Center for Northern Biosphere, Hokkaido University, Muroran-shi, Hokkaido, 051–0003, Japan;(2) Hokkaido Nuclear Energy Environmental Research Center, Kyowa-cho, Hokkaido, 045–0123, Japan
Abstract:The organization of 5S ribosomal RNA genes (rDNA) was examined for threeJapanese Laminaria species, L. japonica, L.religiosa and L. ochotensis. The linkage of 5SrDNA with the 18S-5.8S-25S rDNAs unit known in the brown algaScytosiphon lomentaria could not be detected inLaminaria. Instead, the tandem repeats of 5S rDNA were notassociated with the 18S-5.8S-25S rDNAs unit. The nucleotide sequence of 5S rDNAwas completely identical among these three species and its length was 118bp. However, a difference of nucleotide arrangement was detectedinthe spacer region of the tandemly repeated 5S rDNAs. Several nucleotideinsertion / deletions and substitutions were confirmed between differentindividuals of L. japonica, which were collected from notonly disjunct localities, but also the same locality. The lengths of the spacerregion of L. japonica, L. religiosaand L. ochotensis were 247–252 bp, 232bp and 252 bp, respectively.
Keywords:5S rDNA spacer  5S ribosomal RNA genes (rDNA)  Kelp  Laminaria  Sequencing analysis
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