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The NMR structure of the domain II of a chloroplastic NifU-like protein OsNifU1A
Authors:Hiroyuki Kumeta  Kenji Ogura  Munehiko Asayama  Shizue Katoh  Etsuko Katoh  Keizo Teshima  Fuyuhiko Inagaki
Institution:(1) Laboratory of Structural Biology, Graduate School of Pharmaceutical Sciences, Hokkaido University, Sapporo Hokkaido, 060-0812, Japan;(2) Laboratory of Molecular Genetics, College of Agriculture, Ibaraki University, Ami 3-21-1, Ibaraki 300-0393, Japan;(3) Biochemistry Department, National Institute of Agrobiological Science, Tsukuba Ibaraki, 305-8602, Japan;(4) Faculty of Integrated Arts and Sciences, Hiroshima University, 1-7-1 Kagamiyaqma, Higashi-Hiroshima 739-8521, Japan
Abstract:NifU-like proteins are a highly conserved protein that serves as the scaffold for assembly of Fe-S clusters. Chloroplastic NifU-like proteins have tandem NifU like domains, named domain I and domain II. Although the amino acid sequences of these domains are very similar to each other, the predicted functional region for the Fe-S cluster assembly, the CXXC motif, exists only in domain I. The structure of the domain II of chloroplastic NifU-like protein OsNifU1A has an α-β sandwich structure containing two α helices located on one side of the β-sheet. The electrostatic surface potential of OsNifU1A domain II is predominantly positively charged. Chloroplastic NifU-like proteins are targeted to ferredoxin for transferring the Fe-S cluster. The ferredoxin presents an overall negatively charged surface, which may evoke an electrostatic association with OsNifU1A domain II.
Keywords:Oryza sativa            NifU  NifU-like protein  Fe–  S cluster  NMR structure
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