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Construction of a cross-species cell landscape at single-cell level
Authors:Renying Wang  Peijing Zhang  Jingjing Wang  Lifeng Ma  Weigao E  Shengbao Suo  Mengmeng Jiang  Jiaqi Li  Haide Chen  Huiyu Sun  Lijiang Fei  Ziming Zhou  Yincong Zhou  Yao Chen  Weiqi Zhang  Xinru Wang  Yuqing Mei  Zhongyi Sun  Chengxuan Yu  Jikai Shao  Yuting Fu  Yanyu Xiao  Fang Ye  Xing Fang  Hanyu Wu  Qile Guo  Xiunan Fang  Xia Li  Xianzhi Gao  Dan Wang  Peng-Fei Xu  Rui Zeng  Gang Xu  Lijun Zhu  Lie Wang  Jing Qu  Dan Zhang  Hongwei Ouyang  He Huang  Ming Chen  Shyh-Chang NG  Guang-Hui Liu  Guo-Cheng Yuan  Guoji Guo  Xiaoping Han
Abstract:Individual cells are basic units of life. Despite extensive efforts to characterize the cellular heterogeneity of different organisms, cross-species comparisons of landscape dynamics have not been achieved. Here, we applied single-cell RNA sequencing (scRNA-seq) to map organism-level cell landscapes at multiple life stages for mice, zebrafish and Drosophila. By integrating the comprehensive dataset of > 2.6 million single cells, we constructed a cross-species cell landscape and identified signatures and common pathways that changed throughout the life span. We identified structural inflammation and mitochondrial dysfunction as the most common hallmarks of organism aging, and found that pharmacological activation of mitochondrial metabolism alleviated aging phenotypes in mice. The cross-species cell landscape with other published datasets were stored in an integrated online portal—Cell Landscape. Our work provides a valuable resource for studying lineage development, maturation and aging.
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