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Identification of disulfide reductases in Campylobacterales: a bioinformatics investigation
Authors:Nadeem O. Kaakoush  Torsten Sterzenbach  William G. Miller  Sebastian Suerbaum  George Louis Mendz
Affiliation:(1) School of Medical Sciences, The University of New South Wales, Sydney, NSW, 2052, Australia;(2) Institut für Medizinische Mikrobiologie und Krankenhaushygiene, Medizinische Hochschule Hannover, Hannover, Germany;(3) Produce Safety and Microbiology Research Unit, U.S. Department of Agriculture, Agricultural Research Service, Albany, CA 94710, USA
Abstract:Disulfide reductases of host-colonising bacteria are involved in the expression of virulence factors, resistance to drugs, and elimination of toxic compounds. Large-scale genome analyses of 281 prokaryotes identified CXXC and CXXC-derived motifs in each microorganism. The total number of these motifs showed correlations with genome size and oxygen tolerance of the prokaryotes. Specific bioinformatic analyses served to identify putative disulfide reductases in the Campylobacterales Campylobacter jejuni, Helicobacter pylori, Wolinella succinogenes and Arcobacter butzleri which colonise the gastrointestinal tract of higher animals. Three filters applied to the genomes of these species yielded 35, 25, 28 and 34 genes, respectively, encoding proteins with the characteristics of disulfide reductases. Ten proteins were common to the four species, including four belonging to the thioredoxin system. The presence of thioredoxin reductase activities was detected in the four bacterial species by observing dithiobis-2-nitrobenzoic acid reduction with β-nicotinamide adenine dinucleotide phosphate as cofactor. Phylogenetic analyses of the thioredoxin reductases TrxB1 and TrxB2 of the four Campylobacterales were performed. Their TrxB1 proteins were more closely related to those of Firmicutes than to the corresponding proteins of other Proteobacteria. The Campylobacterales TrxB2 proteins were closer to glutathione reductases of other organisms than to their respective TrxB1 proteins. The phylogenetic features of the Campylobacterales thioredoxin reductases suggested a special role for these enzymes in the physiology of these bacteria. Electronic Supplementary Material The online version of this article (doi:) contains supplementary material, which is available to authorized users.
Keywords:Campylobacterales  Disulfide reductase  Genome analyses  Phylogeny
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