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Primer Design and Optimization for RAPD Analysis of Nepenthes
Authors:SH Lim  DCY Phua  HTW Tan
Institution:(1) Department of Biological Sciences, The National University of Singapore, Singapore, 119260, Republic of Singapore e-mail
Abstract:Primers with higher G+C content produced better random amplified polymorphic DNA (RAPD) profiles in Nepenthes. The occurrence of clustered G's and C's in the center of the primer seemed also to influence the banding patterns. It was also observed that for certain polymerases, the use of different buffers other than that recommended by the manufacturer provided a better amplification profile for Nepenthes.
Keywords:GC content  PCR buffer  RAPD markers
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