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Isolation and characterization of 3-N-trimethylamino-1-propanol-degrading Rhodococcus sp. strain A2
Authors:Isam Ali Mohamed Ahmed,Jiro Arima,Tsuyoshi Ichiyanagi,Emi Sakuno,&   Nobuhiro Mori
Affiliation:United Graduate School of Agricultural Sciences, Tottori University, Tottori, Japan;;and Faculty of Agriculture, Tottori University, Tottori, Japan
Abstract:The aerobic degradation of 3- N -trimethylamino-1-propanol (homocholine) as a sole source of carbon and nitrogen has been found for a Rhodococcus sp. bacterium isolated from soil. The isolate was identified as Rhodococcus sp. strain A2 based on its phenotypic features, physiological and biochemical characteristics, and results of phylogenetic analysis. The washed cells of strain A2 completely degraded homocholine within 6 h, with concomitant formation of several metabolites. Analysis of the metabolites using capillary electrophoresis, fast atom bombardment–MS, and GC–MS showed that trimethylamine was the major metabolite, in addition to β-alanine betaine (β-AB) and trimethylaminopropionaldehyde. Therefore, the possible degradation pathway of homocholine in the isolated strain is through consequent oxidation of the alcohol group (-OH) to aldehyde (-CHO) and acid (-COOH). Thereafter, the cleavage of β-AB C–N bonds yielded trimethylamine and alkyl chain.
Keywords:Rhodococcus sp. strain A2    quaternary ammonium compounds    homocholine    3-N-trimethylamino-1-propanol    16S rRNA gene sequence
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