MicroarrayDesigner: an online search tool and repository for near-optimal microarray experimental designs |
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Authors: | Ahmet Sacan Nilgun Ferhatosmanoglu Hakan Ferhatosmanoglu |
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Affiliation: | (1) Computer Engineering Department, Middle East Technical University, Ankara, Turkey;(2) Department of Computer Science and Engineering, The Ohio State University, Columbus, OH, USA;(3) Department of Industrial and Systems Engineering, The Ohio State University, Columbus, OH, USA |
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Abstract: |
Background Dual-channel microarray experiments are commonly employed for inference of differential gene expressions across varying organisms and experimental conditions. The design of dual-channel microarray experiments that can help minimize the errors in the resulting inferences has recently received increasing attention. However, a general and scalable search tool and a corresponding database of optimal designs were still missing. |
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