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Structure of the Bordetella trematum LPS O-chain subunit
Authors:Vinogradov Evgeny  Caroff Martine
Institution:Institute for Biological Sciences, National Research Council, 100 Sussex Dr., Ottawa, ON, Canada K1A 0R6.
Abstract:Analysis of the O-chain subunit of the lipopolysaccharide (LPS, endotoxin) isolated from Bordetella trematum, a recently identified human pathogen, was undertaken. The polysaccharide (PS) moiety was shown to contain only two O-chain subunits, which differed in the anomeric bond of their first sugar. A trisaccharide fragment resulting from the cleavage of a FucNAc glycosidic bond was isolated after treatment of the PS with anhydrous HF. Nitrous deamination of the LPS led to the release of the following heptasaccharide corresponding to two trisaccharide subunits linked to an anhydromannitol residue. beta-ManNAc3NAmA-(1-4)-beta-ManNAc3NAmA-(1-3)-alpha-FucNAc-(1-4)-beta-ManNAc3NAmA-(1-4)-beta-ManNAc3NAmA-(1-3)-beta-FucNAc-(1-6)-2,5-anhManol.
Keywords:COSY  correlation spectroscopy  TOCSY  total correlation spectroscopy  NOESY  nuclear overhauser enhancement spectroscopy  HMQC  heteronuclear multiple quantum coherence  HMBC  heteronuclear multiple bond connectivity  HSQC  heteronuclear single quantum correlation  ROESY  rotational nuclear overhauser effect spectroscopy  LPS  lipopolysaccharide  MALDI  matrix-assisted laser desorption/ionization mass spectrometry  FucNAc  2-acetamido-2  6-deoxy-galactose  GlcN  glucosamine  ManNAc3NAcA  2  3-diacetamido-2  3-dideoxy-mannuronic acid  ManNAc3NAmA  2-acetamido-3-acetamidino-2  3-dideoxy-mannuronic acid
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